RNA–Protein interactions for RNA: ENST00000392521.6

CIT-203, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CIT, Length 8,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-203ENST00000392521 CLIP2Q9UDT6 1046 aa13.68□□□□□ -0.22
CIT-203ENST00000392521 FAM114A1Q8IWE2 563 aa13.68□□□□□ -0.22
CIT-203ENST00000392521 CCDC155Q8N6L0 562 aa13.68□□□□□ -0.22
CIT-203ENST00000392521 TTC12Q9H892 705 aaPredicted RBP13.68□□□□□ -0.22
CIT-203ENST00000392521 PODXL2Q9NZ53 605 aa13.68□□□□□ -0.22
CIT-203ENST00000392521 ZC3H6P61129 1189 aaKnown RBP13.67□□□□□ -0.22
CIT-203ENST00000392521 MPRIPQ6WCQ1 1025 aa13.67□□□□□ -0.22
CIT-203ENST00000392521 PKNOX2Q96KN3 472 aa13.67□□□□□ -0.22
CIT-203ENST00000392521 RAB11FIP3O75154 756 aa13.67□□□□□ -0.22
CIT-203ENST00000392521 KIAA0753Q2KHM9 967 aa13.67□□□□□ -0.22
CIT-203ENST00000392521 IPO4Q8TEX9 1081 aaKnown RBP13.67□□□□□ -0.22
CIT-203ENST00000392521 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.67□□□□□ -0.22
CIT-203ENST00000392521 V9GYY5 206 aaPredicted RBP13.67□□□□□ -0.22
CIT-203ENST00000392521 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
CIT-203ENST00000392521 CCDC63Q8NA47 563 aa13.67□□□□□ -0.22
CIT-203ENST00000392521 PLVAPQ9BX97 442 aa13.67□□□□□ -0.22
CIT-203ENST00000392521 CABP1Q9NZU7 370 aa13.67□□□□□ -0.22
CIT-203ENST00000392521 PPP2R1AP30153 589 aa13.67□□□□□ -0.22
CIT-203ENST00000392521 RNF41Q9H4P4 317 aaPredicted RBP13.67□□□□□ -0.22
CIT-203ENST00000392521 PHACTR2O75167 634 aa13.66□□□□□ -0.22
CIT-203ENST00000392521 MVPQ14764 893 aaKnown RBP13.66□□□□□ -0.22
CIT-203ENST00000392521 FERMT3Q86UX7 667 aa13.66□□□□□ -0.22
CIT-203ENST00000392521 CEP112Q8N8E3 955 aa13.66□□□□□ -0.22
CIT-203ENST00000392521 MYD88Q99836 296 aa13.66□□□□□ -0.22
CIT-203ENST00000392521 KIF5BP33176 963 aa13.66□□□□□ -0.22
CIT-203ENST00000392521 RTEL1-TNFRSF6BF6WH68 1400 aa13.66□□□□□ -0.22
CIT-203ENST00000392521 HSF2BPO75031 334 aa13.66□□□□□ -0.22
CIT-203ENST00000392521 C16orf71Q8IYS4 520 aaPredicted RBP13.66□□□□□ -0.22
CIT-203ENST00000392521 GOLGA8BA8MQT2 603 aa13.66□□□□□ -0.22
CIT-203ENST00000392521 CCDC172P0C7W6 258 aa13.66□□□□□ -0.22
CIT-203ENST00000392521 CTAGE5O15320 804 aa13.65□□□□□ -0.22
CIT-203ENST00000392521 CCT2P78371 535 aaKnown RBP13.65□□□□□ -0.22
CIT-203ENST00000392521 CCDC6Q16204 474 aa13.65□□□□□ -0.22
CIT-203ENST00000392521 NAP1L3Q99457 506 aaPredicted RBP13.65□□□□□ -0.22
CIT-203ENST00000392521 CABP5Q9NP86 173 aa13.65□□□□□ -0.22
CIT-203ENST00000392521 ANKLE2Q86XL3 938 aa13.65□□□□□ -0.22
CIT-203ENST00000392521 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
CIT-203ENST00000392521 TOP2AP11388 1531 aaKnown RBP13.65□□□□□ -0.22
CIT-203ENST00000392521 SNX16P57768 344 aa13.65□□□□□ -0.22
CIT-203ENST00000392521 CEP135Q66GS9 1140 aa13.65□□□□□ -0.22
CIT-203ENST00000392521 HLA-DOAP06340 250 aa13.65□□□□□ -0.22
CIT-203ENST00000392521 CKAP4Q07065 602 aaKnown RBP13.65□□□□□ -0.22
CIT-203ENST00000392521 DPH6Q7L8W6 267 aa13.65□□□□□ -0.22
CIT-203ENST00000392521 SMC1BQ8NDV3 1235 aa13.65□□□□□ -0.22
CIT-203ENST00000392521 EXOC6BQ9Y2D4 811 aa13.65□□□□□ -0.22
CIT-203ENST00000392521 IDEP14735 1019 aa13.65□□□□□ -0.22
CIT-203ENST00000392521 NCBP1Q09161 790 aaKnown RBP13.65□□□□□ -0.22
CIT-203ENST00000392521 ISM2Q6H9L7 571 aa13.65□□□□□ -0.22
CIT-203ENST00000392521 MIS18AQ9NYP9 233 aa13.65□□□□□ -0.22
CIT-203ENST00000392521 MROH2BQ7Z745 1585 aa13.64□□□□□ -0.23
CIT-203ENST00000392521 GLRX3O76003 335 aaKnown RBP13.64□□□□□ -0.23
CIT-203ENST00000392521 TPD52P55327 224 aaPredicted RBP13.64□□□□□ -0.23
CIT-203ENST00000392521 KAT14Q9H8E8 782 aa13.64□□□□□ -0.23
CIT-203ENST00000392521 SUPT6HQ7KZ85 1726 aaKnown RBP13.64□□□□□ -0.23
CIT-203ENST00000392521 ADAMTS2O95450 1211 aa13.64□□□□□ -0.23
CIT-203ENST00000392521 BAG3O95817 575 aa13.64□□□□□ -0.23
CIT-203ENST00000392521 GSTA5Q7RTV2 222 aa13.64□□□□□ -0.23
CIT-203ENST00000392521 CGNQ9P2M7 1197 aaKnown RBP13.64□□□□□ -0.23
CIT-203ENST00000392521 PDE4BQ07343 736 aa13.64□□□□□ -0.23
CIT-203ENST00000392521 EXOC1Q9NV70 894 aa13.64□□□□□ -0.23
CIT-203ENST00000392521 CFAP70Q5T0N1 1121 aa13.64□□□□□ -0.23
CIT-203ENST00000392521 TSPY2A6NKD2 308 aa13.63□□□□□ -0.23
CIT-203ENST00000392521 TAF12Q16514 161 aa13.63□□□□□ -0.23
CIT-203ENST00000392521 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
CIT-203ENST00000392521 SELENOOQ9BVL4 669 aa13.63□□□□□ -0.23
CIT-203ENST00000392521 KIF4AO95239 1232 aa13.63□□□□□ -0.23
CIT-203ENST00000392521 PLS1Q14651 629 aa13.63□□□□□ -0.23
CIT-203ENST00000392521 PRPF40BQ6NWY9 871 aaKnown RBP13.63□□□□□ -0.23
CIT-203ENST00000392521 ZNF622Q969S3 477 aaKnown RBP eCLIP13.63□□□□□ -0.238e-7■■■□□ 14.8
CIT-203ENST00000392521 GOLGA8AA7E2F4 631 aa13.63□□□□□ -0.23
CIT-203ENST00000392521 ANAPC4Q9UJX5 808 aa13.63□□□□□ -0.23
CIT-203ENST00000392521 SCAND2PQ9GZW5 306 aaPredicted RBP13.63□□□□□ -0.23
CIT-203ENST00000392521 PRDM10Q9NQV6 1147 aa13.63□□□□□ -0.23
CIT-203ENST00000392521 TRMT112Q9UI30 125 aaKnown RBP13.63□□□□□ -0.23
CIT-203ENST00000392521 POTEB2H3BUK9 544 aa13.63□□□□□ -0.23
CIT-203ENST00000392521 UBA7P41226 1012 aa13.63□□□□□ -0.23
CIT-203ENST00000392521 TERF1P54274 439 aa13.63□□□□□ -0.23
CIT-203ENST00000392521 TMC6Q7Z403 805 aa13.62□□□□□ -0.23
CIT-203ENST00000392521 SLC12A5Q9H2X9 1139 aa13.62□□□□□ -0.23
CIT-203ENST00000392521 TBCAO75347 108 aaKnown RBP13.62□□□□□ -0.23
CIT-203ENST00000392521 TMEM67Q5HYA8 995 aa13.62□□□□□ -0.23
CIT-203ENST00000392521 FAM212AQ96EL1 285 aa13.62□□□□□ -0.23
CIT-203ENST00000392521 CALCOCO1Q9P1Z2 691 aa13.62□□□□□ -0.23
CIT-203ENST00000392521 ZBTB16Q05516 673 aa13.62□□□□□ -0.23
CIT-203ENST00000392521 C16orf45Q96MC5 204 aaPredicted RBP13.62□□□□□ -0.23
CIT-203ENST00000392521 KIF21BO75037 1637 aa13.62□□□□□ -0.23
CIT-203ENST00000392521 TXNDC16Q9P2K2 825 aa13.62□□□□□ -0.23
CIT-203ENST00000392521 FSIP1Q8NA03 581 aa13.61□□□□□ -0.23
CIT-203ENST00000392521 PYM1Q9BRP8 204 aaKnown RBP13.61□□□□□ -0.23
CIT-203ENST00000392521 BIN1O00499 593 aa13.61□□□□□ -0.23
CIT-203ENST00000392521 USP37Q86T82 979 aa13.61□□□□□ -0.23
CIT-203ENST00000392521 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
CIT-203ENST00000392521 ATP2C2O75185 946 aa13.61□□□□□ -0.23
CIT-203ENST00000392521 GAS8O95995 478 aa13.61□□□□□ -0.23
CIT-203ENST00000392521 KANK3Q6NY19 840 aa13.6□□□□□ -0.23
CIT-203ENST00000392521 RASAL2Q9UJF2 1139 aa13.6□□□□□ -0.23
CIT-203ENST00000392521 TMEM110-MUSTN1A8MSY1 372 aa13.6□□□□□ -0.23
CIT-203ENST00000392521 ESPNB1AK53 854 aa13.6□□□□□ -0.23
CIT-203ENST00000392521 DDX46Q7L014 1031 aaKnown RBP13.6□□□□□ -0.23
CIT-203ENST00000392521 NOL3O60936 208 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms