RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.37■□□□□ 0.37
LRRFIP1-204ENST00000392000 KDM4AO75164 1064 aa17.37■□□□□ 0.37
LRRFIP1-204ENST00000392000 TEFQ10587 303 aa17.37■□□□□ 0.37
LRRFIP1-204ENST00000392000 AP5Z1O43299 807 aa17.36■□□□□ 0.37
LRRFIP1-204ENST00000392000 HOXC9P31274 260 aa17.36■□□□□ 0.37
LRRFIP1-204ENST00000392000 CUL4AQ13619 759 aa17.36■□□□□ 0.37
LRRFIP1-204ENST00000392000 SYTL4Q96C24 671 aaPredicted RBP17.36■□□□□ 0.37
LRRFIP1-204ENST00000392000 LRRC2Q9BYS8 371 aa17.36■□□□□ 0.37
LRRFIP1-204ENST00000392000 OSBPL3Q9H4L5 887 aa17.36■□□□□ 0.37
LRRFIP1-204ENST00000392000 UBE2HP62256 183 aa17.36■□□□□ 0.37
LRRFIP1-204ENST00000392000 ERCC4Q92889 916 aaPredicted RBP17.36■□□□□ 0.37
LRRFIP1-204ENST00000392000 IFIT2P09913 472 aaKnown RBP17.36■□□□□ 0.37
LRRFIP1-204ENST00000392000 HSP90B1P14625 803 aaKnown RBP17.36■□□□□ 0.37
LRRFIP1-204ENST00000392000 CCDC94Q9BW85 323 aaPredicted RBP17.36■□□□□ 0.37
LRRFIP1-204ENST00000392000 ZNF710Q8N1W2 664 aa17.35■□□□□ 0.37
LRRFIP1-204ENST00000392000 BOLA2Q9H3K6 86 aa17.35■□□□□ 0.37
LRRFIP1-204ENST00000392000 PLEKHG3A1L390 1219 aa17.35■□□□□ 0.37
LRRFIP1-204ENST00000392000 PROSER3Q2NL68 480 aa17.35■□□□□ 0.37
LRRFIP1-204ENST00000392000 TCHHQ07283 1943 aa17.35■□□□□ 0.37
LRRFIP1-204ENST00000392000 LIG1P18858 919 aa17.34■□□□□ 0.37
LRRFIP1-204ENST00000392000 TRMT1Q9NXH9 659 aaKnown RBP17.34■□□□□ 0.37
LRRFIP1-204ENST00000392000 RIMS1Q86UR5 1692 aaKnown RBP17.34■□□□□ 0.37
LRRFIP1-204ENST00000392000 RAB11FIP3O75154 756 aa17.34■□□□□ 0.37
LRRFIP1-204ENST00000392000 FILIP1Q7Z7B0 1213 aa17.34■□□□□ 0.37
LRRFIP1-204ENST00000392000 EDC3Q96F86 508 aaKnown RBP17.34■□□□□ 0.37
LRRFIP1-204ENST00000392000 DACT1Q9NYF0 836 aa17.34■□□□□ 0.37
LRRFIP1-204ENST00000392000 ATP6V1DQ9Y5K8 247 aa17.34■□□□□ 0.37
LRRFIP1-204ENST00000392000 KIF24Q5T7B8 1368 aa17.34■□□□□ 0.37
LRRFIP1-204ENST00000392000 HMGN5P82970 282 aaKnown RBP17.34■□□□□ 0.37
LRRFIP1-204ENST00000392000 ZNF771Q7L3S4 317 aaPredicted RBP17.34■□□□□ 0.37
LRRFIP1-204ENST00000392000 INTS4Q96HW7 963 aaKnown RBP17.34■□□□□ 0.37
LRRFIP1-204ENST00000392000 CCDC192P0DO97 292 aa17.33■□□□□ 0.37
LRRFIP1-204ENST00000392000 HSPA4P34932 840 aa17.33■□□□□ 0.37
LRRFIP1-204ENST00000392000 NBPF6Q5VWK0 638 aa17.33■□□□□ 0.37
LRRFIP1-204ENST00000392000 NBPF4Q96M43 638 aa17.33■□□□□ 0.37
LRRFIP1-204ENST00000392000 TNMDQ9H2S6 317 aa17.33■□□□□ 0.37
LRRFIP1-204ENST00000392000 CYP46A1Q9Y6A2 500 aa17.33■□□□□ 0.37
LRRFIP1-204ENST00000392000 USP6P35125 1406 aa17.33■□□□□ 0.36
LRRFIP1-204ENST00000392000 FLT4P35916 1363 aa17.33■□□□□ 0.36
LRRFIP1-204ENST00000392000 TNRQ92752 1358 aa17.33■□□□□ 0.36
LRRFIP1-204ENST00000392000 AACSQ86V21 672 aa17.33■□□□□ 0.36
LRRFIP1-204ENST00000392000 FAM184AQ8NB25 1140 aa17.33■□□□□ 0.36
LRRFIP1-204ENST00000392000 ANKRD26Q9UPS8 1709 aa17.33■□□□□ 0.36
LRRFIP1-204ENST00000392000 ZKSCAN1P17029 563 aaPredicted RBP17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 KCNA6P17658 529 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 ZNF530Q6P9A1 599 aaPredicted RBP17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 CLASRPQ8N2M8 674 aaKnown RBP17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 DNAAF4Q8WXU2 420 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 FAM227BQ96M60 508 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 PRDM4Q9UKN5 801 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 CDC37L1Q7L3B6 337 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 NUP62CLQ9H1M0 184 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 DLC1Q96QB1 1528 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 SALL3Q9BXA9 1300 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 BTBD11A6QL63 1104 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 SGSM2O43147 1006 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 CHGBP05060 677 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 MYL6BP14649 208 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 TPD52L1Q16890 204 aaPredicted RBP17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 ANO6Q4KMQ2 910 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 FMNL2Q96PY5 1086 aa17.32■□□□□ 0.36
LRRFIP1-204ENST00000392000 CLTCQ00610 1675 aaKnown RBP17.31■□□□□ 0.36
LRRFIP1-204ENST00000392000 GOLGA6L6A8MZA4 724 aa17.31■□□□□ 0.36
LRRFIP1-204ENST00000392000 GUCY1B3Q02153 619 aa17.31■□□□□ 0.36
LRRFIP1-204ENST00000392000 TERF1P54274 439 aa17.31■□□□□ 0.36
LRRFIP1-204ENST00000392000 PI4K2BQ8TCG2 481 aa17.31■□□□□ 0.36
LRRFIP1-204ENST00000392000 DNAJC25Q9H1X3 360 aa17.31■□□□□ 0.36
LRRFIP1-204ENST00000392000 MAP3K2Q9Y2U5 619 aa17.31■□□□□ 0.36
LRRFIP1-204ENST00000392000 CDC42BPGQ6DT37 1551 aa17.31■□□□□ 0.36
LRRFIP1-204ENST00000392000 ME3Q16798 604 aa17.31■□□□□ 0.36
LRRFIP1-204ENST00000392000 MTERF4Q7Z6M4 381 aaKnown RBP17.31■□□□□ 0.36
LRRFIP1-204ENST00000392000 KIF1BPQ96EK5 621 aa17.31■□□□□ 0.36
LRRFIP1-204ENST00000392000 ANAPC15P60006 121 aa17.3■□□□□ 0.36
LRRFIP1-204ENST00000392000 FSD1Q9BTV5 496 aa17.3■□□□□ 0.36
LRRFIP1-204ENST00000392000 CEP170BQ9Y4F5 1589 aaPredicted RBP17.3■□□□□ 0.36
LRRFIP1-204ENST00000392000 SLC39A6Q13433 755 aa17.3■□□□□ 0.36
LRRFIP1-204ENST00000392000 TTC6Q86TZ1 520 aa17.3■□□□□ 0.36
LRRFIP1-204ENST00000392000 SSH3Q8TE77 659 aa17.3■□□□□ 0.36
LRRFIP1-204ENST00000392000 SPATA32Q96LK8 384 aa17.3■□□□□ 0.36
LRRFIP1-204ENST00000392000 KCNF1Q9H3M0 494 aa17.3■□□□□ 0.36
LRRFIP1-204ENST00000392000 PODXL2Q9NZ53 605 aa17.3■□□□□ 0.36
LRRFIP1-204ENST00000392000 TAF6LQ9Y6J9 622 aa17.3■□□□□ 0.36
LRRFIP1-204ENST00000392000 TMEM2Q9UHN6 1383 aa17.3■□□□□ 0.36
LRRFIP1-204ENST00000392000 MAP3K11Q16584 847 aa17.29■□□□□ 0.36
LRRFIP1-204ENST00000392000 ESCO1Q5FWF5 840 aa17.29■□□□□ 0.36
LRRFIP1-204ENST00000392000 IGSF1Q8N6C5 1336 aa17.29■□□□□ 0.36
LRRFIP1-204ENST00000392000 H3BQV1 296 aa17.29■□□□□ 0.36
LRRFIP1-204ENST00000392000 IFFO2Q5TF58 517 aa17.29■□□□□ 0.36
LRRFIP1-204ENST00000392000 KRT85P78386 507 aa17.29■□□□□ 0.36
LRRFIP1-204ENST00000392000 MTMR6Q9Y217 621 aa17.29■□□□□ 0.36
LRRFIP1-204ENST00000392000 LSG1Q9H089 658 aaKnown RBP17.28■□□□□ 0.36
LRRFIP1-204ENST00000392000 TLR7Q9NYK1 1049 aaKnown RBP17.28■□□□□ 0.36
LRRFIP1-204ENST00000392000 RICTORQ6R327 1708 aa17.28■□□□□ 0.36
LRRFIP1-204ENST00000392000 TNNT1P13805 278 aa17.28■□□□□ 0.36
LRRFIP1-204ENST00000392000 PSME1Q06323 249 aa17.28■□□□□ 0.36
LRRFIP1-204ENST00000392000 ARID5BQ14865 1188 aa17.28■□□□□ 0.36
LRRFIP1-204ENST00000392000 RAD50Q92878 1312 aa17.28■□□□□ 0.36
LRRFIP1-204ENST00000392000 TYRO3Q06418 890 aa17.28■□□□□ 0.36
LRRFIP1-204ENST00000392000 PRIMPOLQ96LW4 560 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms