RNA–Protein interactions for RNA: ENST00000391998.3

TPM3P6-201, Transcript of tropomyosin 3 pseudogene 6, humanhuman

BASIC

Gene TPM3P6, Length 742 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P6-201ENST00000391998 A1BGP04217 495 aa12.84□□□□□ -0.35
TPM3P6-201ENST00000391998 PRPF40BQ6NWY9 871 aaKnown RBP12.84□□□□□ -0.35
TPM3P6-201ENST00000391998 PNMA8AQ86V59 439 aaPredicted RBP12.84□□□□□ -0.35
TPM3P6-201ENST00000391998 LDHDQ86WU2 507 aa12.84□□□□□ -0.35
TPM3P6-201ENST00000391998 NYXQ9GZU5 481 aa12.84□□□□□ -0.35
TPM3P6-201ENST00000391998 ZNF330Q9Y3S2 320 aaPredicted RBP12.84□□□□□ -0.35
TPM3P6-201ENST00000391998 BRCA1P38398 1863 aaKnown RBP12.83□□□□□ -0.36
TPM3P6-201ENST00000391998 NRXN2Q9P2S2 1712 aa12.83□□□□□ -0.36
TPM3P6-201ENST00000391998 ERVV-1B6SEH8 477 aa12.83□□□□□ -0.36
TPM3P6-201ENST00000391998 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
TPM3P6-201ENST00000391998 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
TPM3P6-201ENST00000391998 TAF7Q15545 349 aaPredicted RBP12.83□□□□□ -0.36
TPM3P6-201ENST00000391998 TNRC6CQ9HCJ0 1690 aaKnown RBP12.83□□□□□ -0.36
TPM3P6-201ENST00000391998 POTECB2RU33 542 aa12.82□□□□□ -0.36
TPM3P6-201ENST00000391998 FKBP4Q02790 459 aaKnown RBP eCLIP12.82□□□□□ -0.36
TPM3P6-201ENST00000391998 TNS4Q8IZW8 715 aa12.82□□□□□ -0.36
TPM3P6-201ENST00000391998 C7orf43Q8WVR3 580 aa12.82□□□□□ -0.36
TPM3P6-201ENST00000391998 USP16Q9Y5T5 823 aa12.82□□□□□ -0.36
TPM3P6-201ENST00000391998 COL3A1P02461 1466 aaPredicted RBP12.82□□□□□ -0.36
TPM3P6-201ENST00000391998 GTF2E1P29083 439 aaPredicted RBP12.81□□□□□ -0.36
TPM3P6-201ENST00000391998 PRELPP51888 382 aa12.81□□□□□ -0.36
TPM3P6-201ENST00000391998 PHACTR3Q96KR7 559 aa12.81□□□□□ -0.36
TPM3P6-201ENST00000391998 PSMD1Q99460 953 aa12.81□□□□□ -0.36
TPM3P6-201ENST00000391998 VPS33BQ9H267 617 aa12.81□□□□□ -0.36
TPM3P6-201ENST00000391998 NIP7Q9Y221 180 aaKnown RBP eCLIP12.81□□□□□ -0.36
TPM3P6-201ENST00000391998 JDP2Q8WYK2 163 aa12.8□□□□□ -0.36
TPM3P6-201ENST00000391998 TMX4Q9H1E5 349 aaPredicted RBP12.8□□□□□ -0.36
TPM3P6-201ENST00000391998 ERBB4Q15303 1308 aa12.8□□□□□ -0.36
TPM3P6-201ENST00000391998 COL13A1Q5TAT6 717 aaPredicted RBP12.79□□□□□ -0.36
TPM3P6-201ENST00000391998 BABAM1Q9NWV8 329 aa12.79□□□□□ -0.36
TPM3P6-201ENST00000391998 HACL1Q9UJ83 578 aa12.79□□□□□ -0.36
TPM3P6-201ENST00000391998 HSPA1AP0DMV8 641 aaKnown RBP12.78□□□□□ -0.36
TPM3P6-201ENST00000391998 HSPA1BP0DMV9 641 aaKnown RBP12.78□□□□□ -0.36
TPM3P6-201ENST00000391998 PPP2R1AP30153 589 aa12.78□□□□□ -0.36
TPM3P6-201ENST00000391998 HTRA3P83110 453 aa12.78□□□□□ -0.36
TPM3P6-201ENST00000391998 CRY2Q49AN0 593 aa12.78□□□□□ -0.36
TPM3P6-201ENST00000391998 GPC2Q8N158 579 aa12.78□□□□□ -0.36
TPM3P6-201ENST00000391998 TAF1DQ9H5J8 278 aaPredicted RBP12.78□□□□□ -0.36
TPM3P6-201ENST00000391998 IBTKQ9P2D0 1353 aaPredicted RBP12.78□□□□□ -0.36
TPM3P6-201ENST00000391998 WDR90Q96KV7 1748 aa12.77□□□□□ -0.36
TPM3P6-201ENST00000391998 TMEM88BA6NKF7 163 aa12.77□□□□□ -0.37
TPM3P6-201ENST00000391998 FZD9O00144 591 aa12.77□□□□□ -0.37
TPM3P6-201ENST00000391998 DDNO94850 711 aaPredicted RBP12.77□□□□□ -0.37
TPM3P6-201ENST00000391998 KIF6Q6ZMV9 814 aa12.77□□□□□ -0.37
TPM3P6-201ENST00000391998 AIDAQ96BJ3 306 aa12.77□□□□□ -0.37
TPM3P6-201ENST00000391998 PRDM10Q9NQV6 1147 aa12.77□□□□□ -0.37
TPM3P6-201ENST00000391998 RNF123Q5XPI4 1314 aa12.77□□□□□ -0.37
TPM3P6-201ENST00000391998 PASKQ96RG2 1323 aa12.77□□□□□ -0.37
TPM3P6-201ENST00000391998 UBR2Q8IWV8 1755 aa12.76□□□□□ -0.37
TPM3P6-201ENST00000391998 HOXA10P31260 410 aaPredicted RBP12.76□□□□□ -0.37
TPM3P6-201ENST00000391998 IARSP41252 1262 aaKnown RBP12.76□□□□□ -0.37
TPM3P6-201ENST00000391998 EIF6P56537 245 aaKnown RBP12.76□□□□□ -0.37
TPM3P6-201ENST00000391998 PARP10Q53GL7 1025 aa12.76□□□□□ -0.37
TPM3P6-201ENST00000391998 MCM10Q7L590 875 aa12.76□□□□□ -0.37
TPM3P6-201ENST00000391998 KCNQ3O43525 872 aa12.75□□□□□ -0.37
TPM3P6-201ENST00000391998 CNTNAP1P78357 1384 aa12.75□□□□□ -0.37
TPM3P6-201ENST00000391998 RIC1Q4ADV7 1423 aa12.75□□□□□ -0.37
TPM3P6-201ENST00000391998 PPP1R42Q7Z4L9 355 aa12.75□□□□□ -0.37
TPM3P6-201ENST00000391998 RBM17Q96I25 401 aaKnown RBP12.75□□□□□ -0.37
TPM3P6-201ENST00000391998 CRAMP1Q96RY5 1269 aa12.75□□□□□ -0.37
TPM3P6-201ENST00000391998 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
TPM3P6-201ENST00000391998 MAP3K15Q6ZN16 1313 aa12.74□□□□□ -0.37
TPM3P6-201ENST00000391998 NBPF26B4DH59 902 aa12.74□□□□□ -0.37
TPM3P6-201ENST00000391998 LMOD1P29536 600 aaPredicted RBP12.74□□□□□ -0.37
TPM3P6-201ENST00000391998 EPHX2P34913 555 aa12.74□□□□□ -0.37
TPM3P6-201ENST00000391998 CTCFP49711 727 aaPredicted RBP12.74□□□□□ -0.37
TPM3P6-201ENST00000391998 MAP2K1Q02750 393 aaPredicted RBP12.74□□□□□ -0.37
TPM3P6-201ENST00000391998 NBPF10Q6P3W6 841 aaKnown RBP12.74□□□□□ -0.37
TPM3P6-201ENST00000391998 NBPF15Q8N660 670 aa12.74□□□□□ -0.37
TPM3P6-201ENST00000391998 RPGRQ92834 1020 aaKnown RBP12.74□□□□□ -0.37
TPM3P6-201ENST00000391998 ITGBL1O95965 494 aaPredicted RBP12.73□□□□□ -0.37
TPM3P6-201ENST00000391998 LMOD3Q0VAK6 560 aa12.73□□□□□ -0.37
TPM3P6-201ENST00000391998 SYNE4Q8N205 404 aa12.73□□□□□ -0.37
TPM3P6-201ENST00000391998 SUPT20HQ8NEM7 779 aa12.73□□□□□ -0.37
TPM3P6-201ENST00000391998 DLEC1Q9Y238 1755 aa12.73□□□□□ -0.37
TPM3P6-201ENST00000391998 MAPK8IP3Q9UPT6 1336 aa12.72□□□□□ -0.37
TPM3P6-201ENST00000391998 RASSF10A6NK89 507 aa12.72□□□□□ -0.37
TPM3P6-201ENST00000391998 EIF4A1P60842 406 aaKnown RBP12.72□□□□□ -0.37
TPM3P6-201ENST00000391998 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
TPM3P6-201ENST00000391998 USP50Q70EL3 339 aaPredicted RBP12.72□□□□□ -0.37
TPM3P6-201ENST00000391998 CCDC24Q8N4L8 307 aa12.72□□□□□ -0.37
TPM3P6-201ENST00000391998 NLRP3Q96P20 1036 aa12.72□□□□□ -0.37
TPM3P6-201ENST00000391998 ZNF277Q9NRM2 450 aaPredicted RBP12.72□□□□□ -0.37
TPM3P6-201ENST00000391998 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
TPM3P6-201ENST00000391998 SCN7AQ01118 1682 aa12.72□□□□□ -0.37
TPM3P6-201ENST00000391998 BBOX1O75936 387 aa12.71□□□□□ -0.37
TPM3P6-201ENST00000391998 ECE1P42892 770 aa12.71□□□□□ -0.37
TPM3P6-201ENST00000391998 NFE2L2Q16236 605 aa12.71□□□□□ -0.37
TPM3P6-201ENST00000391998 EAPPQ56P03 285 aaPredicted RBP12.71□□□□□ -0.37
TPM3P6-201ENST00000391998 GIGYF2Q6Y7W6 1299 aaKnown RBP12.71□□□□□ -0.37
TPM3P6-201ENST00000391998 TMC4Q7Z404 712 aa12.71□□□□□ -0.37
TPM3P6-201ENST00000391998 CNTROBQ8N137 903 aa12.71□□□□□ -0.37
TPM3P6-201ENST00000391998 SBF1O95248 1867 aa12.71□□□□□ -0.37
TPM3P6-201ENST00000391998 CDHR2Q9BYE9 1310 aa12.7□□□□□ -0.38
TPM3P6-201ENST00000391998 AFDNP55196 1824 aaKnown RBP12.7□□□□□ -0.38
TPM3P6-201ENST00000391998 PRAMEF22A3QJZ6 481 aa12.7□□□□□ -0.38
TPM3P6-201ENST00000391998 HLFQ16534 295 aa12.7□□□□□ -0.38
TPM3P6-201ENST00000391998 DEFB115Q30KQ5 88 aa12.7□□□□□ -0.38
TPM3P6-201ENST00000391998 SLC10A5Q5PT55 438 aa12.7□□□□□ -0.38
TPM3P6-201ENST00000391998 ZNF34Q8IZ26 560 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms