RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 STK3Q13188 491 aa21.58■■□□□ 1.05
ERCC2-201ENST00000391941 ME3Q16798 604 aa21.58■■□□□ 1.05
ERCC2-201ENST00000391941 MTMR6Q9Y217 621 aa21.58■■□□□ 1.05
ERCC2-201ENST00000391941 LTKP29376 864 aa21.58■■□□□ 1.05
ERCC2-201ENST00000391941 LRMPQ12912 555 aa21.58■■□□□ 1.05
ERCC2-201ENST00000391941 FAM227BQ96M60 508 aa21.58■■□□□ 1.05
ERCC2-201ENST00000391941 MAP7D2Q96T17 732 aa21.58■■□□□ 1.05
ERCC2-201ENST00000391941 LIG1P18858 919 aa21.58■■□□□ 1.04
ERCC2-201ENST00000391941 PPP4R3BQ5MIZ7 849 aa21.58■■□□□ 1.04
ERCC2-201ENST00000391941 CDC37L1Q7L3B6 337 aa21.57■■□□□ 1.04
ERCC2-201ENST00000391941 DIAPH3Q9NSV4 1193 aa21.57■■□□□ 1.04
ERCC2-201ENST00000391941 PTGS1P23219 599 aa21.57■■□□□ 1.04
ERCC2-201ENST00000391941 PDRG1Q9NUG6 133 aa21.57■■□□□ 1.04
ERCC2-201ENST00000391941 NRBP1Q9UHY1 535 aa21.57■■□□□ 1.04
ERCC2-201ENST00000391941 KDRP35968 1356 aa21.56■■□□□ 1.04
ERCC2-201ENST00000391941 CHGBP05060 677 aa21.56■■□□□ 1.04
ERCC2-201ENST00000391941 ESF1Q9H501 851 aaKnown RBP21.56■■□□□ 1.04
ERCC2-201ENST00000391941 BCL2L12Q9HB09 334 aa21.56■■□□□ 1.04
ERCC2-201ENST00000391941 A0A087WWV3 80 aa21.56■■□□□ 1.04
ERCC2-201ENST00000391941 CNTROBQ8N137 903 aa21.56■■□□□ 1.04
ERCC2-201ENST00000391941 FLT4P35916 1363 aa21.56■■□□□ 1.04
ERCC2-201ENST00000391941 AOX1Q06278 1338 aa21.55■■□□□ 1.04
ERCC2-201ENST00000391941 FOSBP53539 338 aa21.55■■□□□ 1.04
ERCC2-201ENST00000391941 FAM184AQ8NB25 1140 aa21.55■■□□□ 1.04
ERCC2-201ENST00000391941 FUCA2Q9BTY2 467 aa21.55■■□□□ 1.04
ERCC2-201ENST00000391941 IGSF1Q8N6C5 1336 aa21.55■■□□□ 1.04
ERCC2-201ENST00000391941 PRAMEF22A3QJZ6 481 aa21.55■■□□□ 1.04
ERCC2-201ENST00000391941 NAA30Q147X3 362 aaPredicted RBP21.55■■□□□ 1.04
ERCC2-201ENST00000391941 TTC6Q86TZ1 520 aa21.55■■□□□ 1.04
ERCC2-201ENST00000391941 TMEM87AQ8NBN3 555 aa21.55■■□□□ 1.04
ERCC2-201ENST00000391941 TPCN1Q9ULQ1 816 aa21.55■■□□□ 1.04
ERCC2-201ENST00000391941 NDUFB9Q9Y6M9 179 aa21.55■■□□□ 1.04
ERCC2-201ENST00000391941 RIOK3O14730 519 aaKnown RBP21.54■■□□□ 1.04
ERCC2-201ENST00000391941 KCNJ4P48050 445 aa21.54■■□□□ 1.04
ERCC2-201ENST00000391941 CEBPAP49715 358 aaPredicted RBP21.54■■□□□ 1.04
ERCC2-201ENST00000391941 HDGFP51858 240 aaKnown RBP21.54■■□□□ 1.04
ERCC2-201ENST00000391941 SBNO1A3KN83 1393 aa21.54■■□□□ 1.04
ERCC2-201ENST00000391941 CWF19L2Q2TBE0 894 aaKnown RBP21.54■■□□□ 1.04
ERCC2-201ENST00000391941 KLHDC4Q8TBB5 520 aa21.54■■□□□ 1.04
ERCC2-201ENST00000391941 CCDC94Q9BW85 323 aaPredicted RBP21.54■■□□□ 1.04
ERCC2-201ENST00000391941 SIL1Q9H173 461 aa21.54■■□□□ 1.04
ERCC2-201ENST00000391941 AGLP35573 1532 aa21.53■■□□□ 1.04
ERCC2-201ENST00000391941 UVSSAQ2YD98 709 aa21.53■■□□□ 1.04
ERCC2-201ENST00000391941 EDC3Q96F86 508 aaKnown RBP21.53■■□□□ 1.04
ERCC2-201ENST00000391941 CCDC8Q9H0W5 538 aaPredicted RBP21.53■■□□□ 1.04
ERCC2-201ENST00000391941 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.53■■□□□ 1.04
ERCC2-201ENST00000391941 KIF1BPQ96EK5 621 aa21.53■■□□□ 1.04
ERCC2-201ENST00000391941 DDX11Q96FC9 970 aa21.53■■□□□ 1.04
ERCC2-201ENST00000391941 XRN1Q8IZH2 1706 aaKnown RBP21.53■■□□□ 1.04
ERCC2-201ENST00000391941 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.53■■□□□ 1.04
ERCC2-201ENST00000391941 TLR7Q9NYK1 1049 aaKnown RBP21.52■■□□□ 1.04
ERCC2-201ENST00000391941 KIF3AQ9Y496 699 aa21.52■■□□□ 1.04
ERCC2-201ENST00000391941 TSPOAP1O95153 1857 aa21.52■■□□□ 1.04
ERCC2-201ENST00000391941 PROSER3Q2NL68 480 aa21.52■■□□□ 1.04
ERCC2-201ENST00000391941 U2AF2P26368 475 aaKnown RBP eCLIP21.51■■□□□ 1.03
ERCC2-201ENST00000391941 POLA2Q14181 598 aa21.51■■□□□ 1.03
ERCC2-201ENST00000391941 NALCNQ8IZF0 1738 aa21.51■■□□□ 1.03
ERCC2-201ENST00000391941 EPB41L2O43491 1005 aaKnown RBP21.51■■□□□ 1.03
ERCC2-201ENST00000391941 CCDC9Q9Y3X0 531 aaKnown RBP21.51■■□□□ 1.03
ERCC2-201ENST00000391941 RAB11FIP3O75154 756 aa21.5■■□□□ 1.03
ERCC2-201ENST00000391941 CEBPZQ03701 1054 aaKnown RBP21.5■■□□□ 1.03
ERCC2-201ENST00000391941 LARP1BQ659C4 914 aaKnown RBP21.5■■□□□ 1.03
ERCC2-201ENST00000391941 KIAA1524Q8TCG1 905 aa21.5■■□□□ 1.03
ERCC2-201ENST00000391941 C16orf45Q96MC5 204 aaPredicted RBP21.5■■□□□ 1.03
ERCC2-201ENST00000391941 HTATSF1O43719 755 aaKnown RBP21.5■■□□□ 1.03
ERCC2-201ENST00000391941 HOXC9P31274 260 aa21.5■■□□□ 1.03
ERCC2-201ENST00000391941 AACSQ86V21 672 aa21.49■■□□□ 1.03
ERCC2-201ENST00000391941 DRC7Q8IY82 874 aa21.49■■□□□ 1.03
ERCC2-201ENST00000391941 FAM208AQ9UK61 1670 aaKnown RBP21.49■■□□□ 1.03
ERCC2-201ENST00000391941 BEND3Q5T5X7 828 aa21.49■■□□□ 1.03
ERCC2-201ENST00000391941 MPRIPQ6WCQ1 1025 aa21.49■■□□□ 1.03
ERCC2-201ENST00000391941 ADAMTS13Q76LX8 1427 aa21.49■■□□□ 1.03
ERCC2-201ENST00000391941 FBXW7Q969H0 707 aa21.49■■□□□ 1.03
ERCC2-201ENST00000391941 DACT1Q9NYF0 836 aa21.49■■□□□ 1.03
ERCC2-201ENST00000391941 SETD1BQ9UPS6 1966 aaKnown RBP21.49■■□□□ 1.03
ERCC2-201ENST00000391941 RBM8AQ9Y5S9 174 aaKnown RBP21.49■■□□□ 1.03
ERCC2-201ENST00000391941 CYP46A1Q9Y6A2 500 aa21.49■■□□□ 1.03
ERCC2-201ENST00000391941 TMEM2Q9UHN6 1383 aa21.48■■□□□ 1.03
ERCC2-201ENST00000391941 ZSCAN20P17040 1043 aaPredicted RBP21.48■■□□□ 1.03
ERCC2-201ENST00000391941 CCDC186Q7Z3E2 898 aa21.48■■□□□ 1.03
ERCC2-201ENST00000391941 AIMP1Q12904 312 aaKnown RBP21.48■■□□□ 1.03
ERCC2-201ENST00000391941 DNAAF4Q8WXU2 420 aa21.48■■□□□ 1.03
ERCC2-201ENST00000391941 BOLA2Q9H3K6 86 aa21.48■■□□□ 1.03
ERCC2-201ENST00000391941 SPTLC3Q9NUV7 552 aa21.47■■□□□ 1.03
ERCC2-201ENST00000391941 MRVI1Q9Y6F6 885 aa21.47■■□□□ 1.03
ERCC2-201ENST00000391941 TTC21AQ8NDW8 1320 aa21.47■■□□□ 1.03
ERCC2-201ENST00000391941 NMIQ13287 307 aaPredicted RBP21.47■■□□□ 1.03
ERCC2-201ENST00000391941 ANO6Q4KMQ2 910 aa21.47■■□□□ 1.03
ERCC2-201ENST00000391941 MTERF4Q7Z6M4 381 aaKnown RBP21.47■■□□□ 1.03
ERCC2-201ENST00000391941 TOPAZ1Q8N9V7 1692 aa21.47■■□□□ 1.03
ERCC2-201ENST00000391941 LETM1O95202 739 aaPredicted RBP21.46■■□□□ 1.03
ERCC2-201ENST00000391941 LARP1Q6PKG0 1096 aaKnown RBP21.46■■□□□ 1.03
ERCC2-201ENST00000391941 AMOTL2Q9Y2J4 779 aa21.46■■□□□ 1.03
ERCC2-201ENST00000391941 ARID5BQ14865 1188 aa21.46■■□□□ 1.03
ERCC2-201ENST00000391941 ABTB2Q8N961 1025 aa21.46■■□□□ 1.03
ERCC2-201ENST00000391941 LRRC59Q96AG4 307 aaKnown RBP21.46■■□□□ 1.03
ERCC2-201ENST00000391941 PRIMPOLQ96LW4 560 aa21.46■■□□□ 1.03
ERCC2-201ENST00000391941 LRRC2Q9BYS8 371 aa21.46■■□□□ 1.03
ERCC2-201ENST00000391941 MAP3K5Q99683 1374 aa21.46■■□□□ 1.03
ERCC2-201ENST00000391941 A0A0D9SFI3 127 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms