RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 DDX10Q13206 875 aaKnown RBP9.25□□□□□ -0.93
RNU1-56P-201ENST00000391303 GRIPAP1Q4V328 841 aa9.25□□□□□ -0.93
RNU1-56P-201ENST00000391303 KIF6Q6ZMV9 814 aa9.25□□□□□ -0.93
RNU1-56P-201ENST00000391303 C16orf71Q8IYS4 520 aaPredicted RBP9.25□□□□□ -0.93
RNU1-56P-201ENST00000391303 TSPYL4Q9UJ04 414 aa9.25□□□□□ -0.93
RNU1-56P-201ENST00000391303 NIP7Q9Y221 180 aaKnown RBP eCLIP9.25□□□□□ -0.93
RNU1-56P-201ENST00000391303 RNF123Q5XPI4 1314 aa9.25□□□□□ -0.93
RNU1-56P-201ENST00000391303 MAP3K15Q6ZN16 1313 aa9.25□□□□□ -0.93
RNU1-56P-201ENST00000391303 RIC1Q4ADV7 1423 aa9.24□□□□□ -0.93
RNU1-56P-201ENST00000391303 GLTPD2A6NH11 291 aa9.24□□□□□ -0.93
RNU1-56P-201ENST00000391303 NFKBIEO00221 500 aa9.24□□□□□ -0.93
RNU1-56P-201ENST00000391303 HOXB7P09629 217 aa9.24□□□□□ -0.93
RNU1-56P-201ENST00000391303 ALDH1B1P30837 517 aa9.24□□□□□ -0.93
RNU1-56P-201ENST00000391303 WDR43Q15061 677 aaKnown RBP eCLIP9.24□□□□□ -0.93
RNU1-56P-201ENST00000391303 CC2D2BQ6DHV5 1058 aa9.24□□□□□ -0.93
RNU1-56P-201ENST00000391303 DPY19L2Q6NUT2 758 aa9.24□□□□□ -0.93
RNU1-56P-201ENST00000391303 ZNF622Q969S3 477 aaKnown RBP eCLIP9.24□□□□□ -0.93
RNU1-56P-201ENST00000391303 RUNDC1Q96C34 613 aa9.24□□□□□ -0.93
RNU1-56P-201ENST00000391303 CHMP4AQ9BY43 222 aa9.24□□□□□ -0.93
RNU1-56P-201ENST00000391303 NRXN2Q9P2S2 1712 aa9.24□□□□□ -0.93
RNU1-56P-201ENST00000391303 VEGFAP15692 232 aaPredicted RBP9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 GTF2E1P29083 439 aaPredicted RBP9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 ZEB1P37275 1124 aaPredicted RBP9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 CALD1Q05682 793 aaKnown RBP9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 CRY2Q49AN0 593 aa9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 PARP10Q53GL7 1025 aa9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 CCDC93Q567U6 631 aa9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 PRPF40BQ6NWY9 871 aaKnown RBP9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 RTKN2Q8IZC4 609 aa9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 C7orf43Q8WVR3 580 aa9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 TAOK3Q9H2K8 898 aa9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 PRKRIP1Q9H875 184 aaPredicted RBP9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 NMRK2Q9NPI5 230 aa9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 MIS18AQ9NYP9 233 aa9.23□□□□□ -0.93
RNU1-56P-201ENST00000391303 SIPA1L3O60292 1781 aaPredicted RBP9.22□□□□□ -0.93
RNU1-56P-201ENST00000391303 CHL1O00533 1208 aa9.22□□□□□ -0.93
RNU1-56P-201ENST00000391303 C21orf2O43822 256 aa9.22□□□□□ -0.93
RNU1-56P-201ENST00000391303 HSP90AB3PQ58FF7 597 aa9.22□□□□□ -0.93
RNU1-56P-201ENST00000391303 GIGYF2Q6Y7W6 1299 aaKnown RBP9.22□□□□□ -0.93
RNU1-56P-201ENST00000391303 SMC1BQ8NDV3 1235 aa9.22□□□□□ -0.93
RNU1-56P-201ENST00000391303 THUMPD2Q9BTF0 503 aaKnown RBP9.22□□□□□ -0.93
RNU1-56P-201ENST00000391303 SCN7AQ01118 1682 aa9.22□□□□□ -0.93
RNU1-56P-201ENST00000391303 GOLGB1Q14789 3259 aaKnown RBP9.21□□□□□ -0.93
RNU1-56P-201ENST00000391303 HOXA10P31260 410 aaPredicted RBP9.21□□□□□ -0.94
RNU1-56P-201ENST00000391303 PIP4K2AP48426 406 aaPredicted RBP9.21□□□□□ -0.94
RNU1-56P-201ENST00000391303 RASSF7Q02833 373 aa9.21□□□□□ -0.94
RNU1-56P-201ENST00000391303 HLFQ16534 295 aa9.21□□□□□ -0.94
RNU1-56P-201ENST00000391303 ERFEQ4G0M1 354 aa9.21□□□□□ -0.94
RNU1-56P-201ENST00000391303 LRP10Q7Z4F1 713 aa9.21□□□□□ -0.94
RNU1-56P-201ENST00000391303 PPP1R42Q7Z4L9 355 aa9.21□□□□□ -0.94
RNU1-56P-201ENST00000391303 ZNF34Q8IZ26 560 aa9.21□□□□□ -0.94
RNU1-56P-201ENST00000391303 RRP7AQ9Y3A4 280 aaKnown RBP9.21□□□□□ -0.94
RNU1-56P-201ENST00000391303 FKBP4Q02790 459 aaKnown RBP eCLIP9.2□□□□□ -0.94
RNU1-56P-201ENST00000391303 NCBP3Q53F19 620 aaKnown RBP9.2□□□□□ -0.94
RNU1-56P-201ENST00000391303 SLC10A5Q5PT55 438 aa9.2□□□□□ -0.94
RNU1-56P-201ENST00000391303 CFAP44Q96MT7 982 aa9.2□□□□□ -0.94
RNU1-56P-201ENST00000391303 CRAMP1Q96RY5 1269 aa9.2□□□□□ -0.94
RNU1-56P-201ENST00000391303 DDX21Q9NR30 783 aaKnown RBP eCLIP9.2□□□□□ -0.94
RNU1-56P-201ENST00000391303 ADAMTS8Q9UP79 889 aa9.2□□□□□ -0.94
RNU1-56P-201ENST00000391303 IQCA1LA6NCM1 817 aa9.19□□□□□ -0.94
RNU1-56P-201ENST00000391303 MYL6BP14649 208 aa9.19□□□□□ -0.94
RNU1-56P-201ENST00000391303 PRELPP51888 382 aa9.19□□□□□ -0.94
RNU1-56P-201ENST00000391303 PDIA6Q15084 440 aa9.19□□□□□ -0.94
RNU1-56P-201ENST00000391303 TTLL7Q6ZT98 887 aa9.19□□□□□ -0.94
RNU1-56P-201ENST00000391303 PSMD1Q99460 953 aa9.19□□□□□ -0.94
RNU1-56P-201ENST00000391303 VPS33BQ9H267 617 aa9.19□□□□□ -0.94
RNU1-56P-201ENST00000391303 RRAGCQ9HB90 399 aa9.19□□□□□ -0.94
RNU1-56P-201ENST00000391303 TRIM35Q9UPQ4 493 aa9.19□□□□□ -0.94
RNU1-56P-201ENST00000391303 NTSR2O95665 410 aa9.18□□□□□ -0.94
RNU1-56P-201ENST00000391303 CCDC24Q8N4L8 307 aa9.18□□□□□ -0.94
RNU1-56P-201ENST00000391303 RPGRQ92834 1020 aaKnown RBP9.18□□□□□ -0.94
RNU1-56P-201ENST00000391303 L3MBTL3Q96JM7 780 aaPredicted RBP9.18□□□□□ -0.94
RNU1-56P-201ENST00000391303 NLRP3Q96P20 1036 aa9.18□□□□□ -0.94
RNU1-56P-201ENST00000391303 UTP14AQ9BVJ6 771 aaKnown RBP9.18□□□□□ -0.94
RNU1-56P-201ENST00000391303 TMX4Q9H1E5 349 aaPredicted RBP9.18□□□□□ -0.94
RNU1-56P-201ENST00000391303 ZBTB3Q9H5J0 574 aa9.18□□□□□ -0.94
RNU1-56P-201ENST00000391303 DBF4Q9UBU7 674 aaPredicted RBP9.18□□□□□ -0.94
RNU1-56P-201ENST00000391303 ARFGEF1Q9Y6D6 1849 aa9.18□□□□□ -0.94
RNU1-56P-201ENST00000391303 BRCA1P38398 1863 aaKnown RBP9.17□□□□□ -0.94
RNU1-56P-201ENST00000391303 N4BP2Q86UW6 1770 aaPredicted RBP9.17□□□□□ -0.94
RNU1-56P-201ENST00000391303 UBN2Q6ZU65 1347 aa9.17□□□□□ -0.94
RNU1-56P-201ENST00000391303 EIF2S2P20042 333 aaKnown RBP9.17□□□□□ -0.94
RNU1-56P-201ENST00000391303 GNAI1P63096 354 aa9.17□□□□□ -0.94
RNU1-56P-201ENST00000391303 TCIRG1Q13488 830 aa9.17□□□□□ -0.94
RNU1-56P-201ENST00000391303 SUSD4Q5VX71 490 aa9.17□□□□□ -0.94
RNU1-56P-201ENST00000391303 COPS6Q7L5N1 327 aa9.17□□□□□ -0.94
RNU1-56P-201ENST00000391303 TMC4Q7Z404 712 aa9.17□□□□□ -0.94
RNU1-56P-201ENST00000391303 NGEFQ8N5V2 710 aa9.17□□□□□ -0.94
RNU1-56P-201ENST00000391303 RBM17Q96I25 401 aaKnown RBP9.17□□□□□ -0.94
RNU1-56P-201ENST00000391303 IFT57Q9NWB7 429 aa9.17□□□□□ -0.94
RNU1-56P-201ENST00000391303 HYPKQ9NX55 129 aa9.17□□□□□ -0.94
RNU1-56P-201ENST00000391303 BBOX1O75936 387 aa9.16□□□□□ -0.94
RNU1-56P-201ENST00000391303 ZNF853P0CG23 659 aa9.16□□□□□ -0.94
RNU1-56P-201ENST00000391303 HSP90B1P14625 803 aaKnown RBP9.16□□□□□ -0.94
RNU1-56P-201ENST00000391303 TRIM28Q13263 835 aaKnown RBP9.16□□□□□ -0.94
RNU1-56P-201ENST00000391303 NEUROD2Q15784 382 aa9.16□□□□□ -0.94
RNU1-56P-201ENST00000391303 HDGFL1Q5TGJ6 251 aa9.16□□□□□ -0.94
RNU1-56P-201ENST00000391303 CCDC146Q8IYE0 955 aa9.16□□□□□ -0.94
RNU1-56P-201ENST00000391303 DNAJC5GQ8N7S2 189 aa9.16□□□□□ -0.94
RNU1-56P-201ENST00000391303 PLBD2Q8NHP8 589 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms