RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 CNTNAP3BQ96NU0 1288 aa11.37□□□□□ -0.59
SNORA40.4-201ENST00000390971 CNTNAP3Q9BZ76 1288 aa11.37□□□□□ -0.59
SNORA40.4-201ENST00000390971 CXXC1Q9P0U4 656 aaPredicted RBP11.37□□□□□ -0.59
SNORA40.4-201ENST00000390971 TMEM88BA6NKF7 163 aa11.36□□□□□ -0.59
SNORA40.4-201ENST00000390971 FKBP5Q13451 457 aaPredicted RBP11.36□□□□□ -0.59
SNORA40.4-201ENST00000390971 GAS6Q14393 721 aa11.36□□□□□ -0.59
SNORA40.4-201ENST00000390971 RNFT1Q5M7Z0 435 aa11.36□□□□□ -0.59
SNORA40.4-201ENST00000390971 SAMD5Q5TGI4 173 aa11.36□□□□□ -0.59
SNORA40.4-201ENST00000390971 ATXN7L1Q9ULK2 861 aaPredicted RBP11.36□□□□□ -0.59
SNORA40.4-201ENST00000390971 BNIP3LO60238 219 aa11.35□□□□□ -0.59
SNORA40.4-201ENST00000390971 ATP2B4P23634 1241 aa11.35□□□□□ -0.59
SNORA40.4-201ENST00000390971 NDFIP2Q9NV92 336 aa11.35□□□□□ -0.59
SNORA40.4-201ENST00000390971 KRT76Q01546 638 aa11.34□□□□□ -0.59
SNORA40.4-201ENST00000390971 COL26A1Q96A83 441 aa11.34□□□□□ -0.59
SNORA40.4-201ENST00000390971 MBIPQ9NS73 344 aa11.34□□□□□ -0.59
SNORA40.4-201ENST00000390971 NSFL1CQ9UNZ2 370 aaKnown RBP11.34□□□□□ -0.59
SNORA40.4-201ENST00000390971 USTQ9Y2C2 406 aa11.34□□□□□ -0.59
SNORA40.4-201ENST00000390971 MX2P20592 715 aa11.33□□□□□ -0.6
SNORA40.4-201ENST00000390971 INSM1Q01101 510 aaPredicted RBP11.33□□□□□ -0.6
SNORA40.4-201ENST00000390971 PDE4CQ08493 712 aa11.33□□□□□ -0.6
SNORA40.4-201ENST00000390971 ABHD17AQ96GS6 310 aa11.33□□□□□ -0.6
SNORA40.4-201ENST00000390971 SUSD3Q96L08 255 aa11.33□□□□□ -0.6
SNORA40.4-201ENST00000390971 SLAIN2Q9P270 581 aa11.33□□□□□ -0.6
SNORA40.4-201ENST00000390971 PTCD1O75127 700 aaKnown RBP11.32□□□□□ -0.6
SNORA40.4-201ENST00000390971 FAM157BP0CG42 384 aa11.32□□□□□ -0.6
SNORA40.4-201ENST00000390971 SRSF11Q05519 484 aaKnown RBP11.32□□□□□ -0.6
SNORA40.4-201ENST00000390971 TNP2Q05952 138 aa11.32□□□□□ -0.6
SNORA40.4-201ENST00000390971 MYO19Q96H55 970 aa11.32□□□□□ -0.6
SNORA40.4-201ENST00000390971 KHNYNO15037 678 aaKnown RBP11.31□□□□□ -0.6
SNORA40.4-201ENST00000390971 MAPTP10636 758 aaKnown RBP11.31□□□□□ -0.6
SNORA40.4-201ENST00000390971 QTRT2Q9H974 415 aaKnown RBP11.31□□□□□ -0.6
SNORA40.4-201ENST00000390971 FGFR3P22607 806 aa11.3□□□□□ -0.6
SNORA40.4-201ENST00000390971 LAMC2Q13753 1193 aa11.3□□□□□ -0.6
SNORA40.4-201ENST00000390971 C11orf91Q3C1V1 193 aa11.3□□□□□ -0.6
SNORA40.4-201ENST00000390971 ZNF280CQ8ND82 737 aa11.3□□□□□ -0.6
SNORA40.4-201ENST00000390971 KLRG1Q96E93 195 aa11.3□□□□□ -0.6
SNORA40.4-201ENST00000390971 HSH2DQ96JZ2 352 aa11.3□□□□□ -0.6
SNORA40.4-201ENST00000390971 DCDC2BA2VCK2 349 aa11.29□□□□□ -0.6
SNORA40.4-201ENST00000390971 SLURP2P0DP57 97 aa11.28□□□□□ -0.6
SNORA40.4-201ENST00000390971 SSFA2P28290 1259 aa11.28□□□□□ -0.6
SNORA40.4-201ENST00000390971 IER5Q5VY09 327 aa11.28□□□□□ -0.6
SNORA40.4-201ENST00000390971 CEP63Q96MT8 703 aa11.28□□□□□ -0.6
SNORA40.4-201ENST00000390971 MKNK1Q9BUB5 465 aa11.28□□□□□ -0.6
SNORA40.4-201ENST00000390971 IGF1RP08069 1367 aa11.28□□□□□ -0.6
SNORA40.4-201ENST00000390971 EFSO43281 561 aa11.27□□□□□ -0.61
SNORA40.4-201ENST00000390971 ADAMTS2O95450 1211 aa11.27□□□□□ -0.61
SNORA40.4-201ENST00000390971 MAP2K3P46734 347 aa11.27□□□□□ -0.61
SNORA40.4-201ENST00000390971 CTBSQ01459 385 aa11.27□□□□□ -0.61
SNORA40.4-201ENST00000390971 DGKZQ13574 1117 aa11.27□□□□□ -0.61
SNORA40.4-201ENST00000390971 COX20Q5RI15 118 aa11.27□□□□□ -0.61
SNORA40.4-201ENST00000390971 C16orf46Q6P387 395 aa11.27□□□□□ -0.61
SNORA40.4-201ENST00000390971 KLK14Q9P0G3 267 aa11.27□□□□□ -0.61
SNORA40.4-201ENST00000390971 CARNS1A5YM72 827 aa11.26□□□□□ -0.61
SNORA40.4-201ENST00000390971 TGFBR3LH3BV60 316 aa11.26□□□□□ -0.61
SNORA40.4-201ENST00000390971 BMP4P12644 408 aa11.26□□□□□ -0.61
SNORA40.4-201ENST00000390971 FAM182BQ5T319 152 aa11.26□□□□□ -0.61
SNORA40.4-201ENST00000390971 BTLAQ7Z6A9 289 aa11.26□□□□□ -0.61
SNORA40.4-201ENST00000390971 ZSCAN1Q8NBB4 408 aa11.26□□□□□ -0.61
SNORA40.4-201ENST00000390971 RETREG2Q8NC44 543 aa11.26□□□□□ -0.61
SNORA40.4-201ENST00000390971 MARK1Q9P0L2 795 aa11.26□□□□□ -0.61
SNORA40.4-201ENST00000390971 NAA30Q147X3 362 aaPredicted RBP11.25□□□□□ -0.61
SNORA40.4-201ENST00000390971 B4GALNT3Q6L9W6 998 aa11.25□□□□□ -0.61
SNORA40.4-201ENST00000390971 CAPN12Q6ZSI9 719 aa11.25□□□□□ -0.61
SNORA40.4-201ENST00000390971 IFT43Q96FT9 208 aa11.25□□□□□ -0.61
SNORA40.4-201ENST00000390971 LRFN2Q9ULH4 789 aa11.25□□□□□ -0.61
SNORA40.4-201ENST00000390971 CD33P20138 364 aa11.24□□□□□ -0.61
SNORA40.4-201ENST00000390971 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
SNORA40.4-201ENST00000390971 C2CD2LO14523 706 aa11.23□□□□□ -0.61
SNORA40.4-201ENST00000390971 TYRO3Q06418 890 aa11.23□□□□□ -0.61
SNORA40.4-201ENST00000390971 SAP130Q9H0E3 1048 aa11.23□□□□□ -0.61
SNORA40.4-201ENST00000390971 BRD7Q9NPI1 651 aa11.23□□□□□ -0.61
SNORA40.4-201ENST00000390971 DMGDHQ9UI17 866 aaKnown RBP11.23□□□□□ -0.61
SNORA40.4-201ENST00000390971 BRD2P25440 801 aaKnown RBP11.22□□□□□ -0.61
SNORA40.4-201ENST00000390971 KCNQ4P56696 695 aa11.22□□□□□ -0.61
SNORA40.4-201ENST00000390971 SFSWAPQ12872 951 aaKnown RBP11.22□□□□□ -0.61
SNORA40.4-201ENST00000390971 STRN4Q9NRL3 753 aa11.22□□□□□ -0.61
SNORA40.4-201ENST00000390971 HCN2Q9UL51 889 aa11.22□□□□□ -0.61
SNORA40.4-201ENST00000390971 KCNH4Q9UQ05 1017 aa11.22□□□□□ -0.61
SNORA40.4-201ENST00000390971 MTMR7Q9Y216 660 aa11.22□□□□□ -0.61
SNORA40.4-201ENST00000390971 MICAL2O94851 1124 aa11.21□□□□□ -0.61
SNORA40.4-201ENST00000390971 LORP23490 312 aaPredicted RBP11.21□□□□□ -0.61
SNORA40.4-201ENST00000390971 SEPT3Q9UH03 358 aa11.21□□□□□ -0.61
SNORA40.4-201ENST00000390971 PHLDB3Q6NSJ2 640 aa11.2□□□□□ -0.62
SNORA40.4-201ENST00000390971 OXCT2Q9BYC2 517 aaPredicted RBP11.2□□□□□ -0.62
SNORA40.4-201ENST00000390971 PRR12Q9ULL5 1215 aa11.2□□□□□ -0.62
SNORA40.4-201ENST00000390971 EPB42P16452 691 aa11.19□□□□□ -0.62
SNORA40.4-201ENST00000390971 IDH3AP50213 366 aa11.19□□□□□ -0.62
SNORA40.4-201ENST00000390971 ACDQ96AP0 544 aa11.19□□□□□ -0.62
SNORA40.4-201ENST00000390971 ARAFP10398 606 aa11.18□□□□□ -0.62
SNORA40.4-201ENST00000390971 INPP5BP32019 993 aa11.18□□□□□ -0.62
SNORA40.4-201ENST00000390971 AVENQ9NQS1 362 aaPredicted RBP11.18□□□□□ -0.62
SNORA40.4-201ENST00000390971 STIM2Q9P246 746 aa11.18□□□□□ -0.62
SNORA40.4-201ENST00000390971 GDF2Q9UK05 429 aaPredicted RBP11.18□□□□□ -0.62
SNORA40.4-201ENST00000390971 FAM181BA6NEQ2 426 aa11.17□□□□□ -0.62
SNORA40.4-201ENST00000390971 SCNN1AP37088 669 aa11.17□□□□□ -0.62
SNORA40.4-201ENST00000390971 ARSDP51689 593 aa11.17□□□□□ -0.62
SNORA40.4-201ENST00000390971 LYPD4Q6UWN0 246 aa11.17□□□□□ -0.62
SNORA40.4-201ENST00000390971 TREML1Q86YW5 311 aa11.17□□□□□ -0.62
SNORA40.4-201ENST00000390971 GOLGA6L1Q8N7Z2 621 aa11.17□□□□□ -0.62
SNORA40.4-201ENST00000390971 WHAMMQ8TF30 809 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms