RNA–Protein interactions for RNA: ENST00000390489.1

TRAJ48-201, Transcript of T cell receptor alpha joining 48, humanhuman

APPRIS P1 BASIC

Gene TRAJ48, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ48-201ENST00000390489 HCN2Q9UL51 889 aa4.88□□□□□ -1.63
TRAJ48-201ENST00000390489 COG6Q9Y2V7 657 aa4.88□□□□□ -1.63
TRAJ48-201ENST00000390489 USP3Q9Y6I4 520 aa4.88□□□□□ -1.63
TRAJ48-201ENST00000390489 SERTM1A2A2V5 107 aa4.87□□□□□ -1.63
TRAJ48-201ENST00000390489 PIK3CDO00329 1044 aa4.87□□□□□ -1.63
TRAJ48-201ENST00000390489 TXLNAP40222 546 aa4.87□□□□□ -1.63
TRAJ48-201ENST00000390489 EPHA4P54764 986 aa4.87□□□□□ -1.63
TRAJ48-201ENST00000390489 NCOA4Q13772 614 aa4.87□□□□□ -1.63
TRAJ48-201ENST00000390489 LRRC69Q6ZNQ3 347 aa4.87□□□□□ -1.63
TRAJ48-201ENST00000390489 SLC9A9Q8IVB4 645 aa4.87□□□□□ -1.63
TRAJ48-201ENST00000390489 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.87□□□□□ -1.63
TRAJ48-201ENST00000390489 ZDHHC1Q8WTX9 485 aa4.87□□□□□ -1.63
TRAJ48-201ENST00000390489 STRN4Q9NRL3 753 aa4.87□□□□□ -1.63
TRAJ48-201ENST00000390489 ZNF232Q9UNY5 417 aa4.87□□□□□ -1.63
TRAJ48-201ENST00000390489 USP17L5A8MUK1 530 aa4.86□□□□□ -1.63
TRAJ48-201ENST00000390489 M0R2N6 131 aa4.86□□□□□ -1.63
TRAJ48-201ENST00000390489 RAD21O60216 631 aa4.86□□□□□ -1.63
TRAJ48-201ENST00000390489 HIRAP54198 1017 aaPredicted RBP4.86□□□□□ -1.63
TRAJ48-201ENST00000390489 PSMA6P60900 246 aaKnown RBP4.86□□□□□ -1.63
TRAJ48-201ENST00000390489 HIF1AQ16665 826 aa4.86□□□□□ -1.63
TRAJ48-201ENST00000390489 PLEKHM2Q8IWE5 1019 aa4.86□□□□□ -1.63
TRAJ48-201ENST00000390489 RHPN1Q8TCX5 695 aa4.86□□□□□ -1.63
TRAJ48-201ENST00000390489 SEMA6BQ9H3T3 888 aa4.86□□□□□ -1.63
TRAJ48-201ENST00000390489 EFCC1Q9HA90 598 aa4.86□□□□□ -1.63
TRAJ48-201ENST00000390489 PARP3Q9Y6F1 533 aa4.86□□□□□ -1.63
TRAJ48-201ENST00000390489 KCNQ4P56696 695 aa4.85□□□□□ -1.63
TRAJ48-201ENST00000390489 TRIM28Q13263 835 aaKnown RBP4.85□□□□□ -1.63
TRAJ48-201ENST00000390489 DOC2BQ14184 412 aa4.85□□□□□ -1.63
TRAJ48-201ENST00000390489 POTEAQ6S8J7 498 aa4.85□□□□□ -1.63
TRAJ48-201ENST00000390489 C7orf43Q8WVR3 580 aa4.85□□□□□ -1.63
TRAJ48-201ENST00000390489 M0R082 166 aa4.84□□□□□ -1.63
TRAJ48-201ENST00000390489 SPEM2Q0P670 501 aa4.84□□□□□ -1.63
TRAJ48-201ENST00000390489 TNS4Q8IZW8 715 aa4.84□□□□□ -1.63
TRAJ48-201ENST00000390489 LARGE2Q8N3Y3 721 aa4.84□□□□□ -1.63
TRAJ48-201ENST00000390489 TPCN2Q8NHX9 752 aa4.84□□□□□ -1.63
TRAJ48-201ENST00000390489 ZNF417Q8TAU3 575 aa4.84□□□□□ -1.63
TRAJ48-201ENST00000390489 ZNF587Q96SQ5 575 aaPredicted RBP4.84□□□□□ -1.63
TRAJ48-201ENST00000390489 RBM19Q9Y4C8 960 aaKnown RBP4.84□□□□□ -1.63
TRAJ48-201ENST00000390489 ADH7P40394 386 aa4.83□□□□□ -1.64
TRAJ48-201ENST00000390489 SFSWAPQ12872 951 aaKnown RBP4.83□□□□□ -1.64
TRAJ48-201ENST00000390489 ZMYM1Q5SVZ6 1142 aa4.83□□□□□ -1.64
TRAJ48-201ENST00000390489 CCDC102BQ68D86 513 aa4.83□□□□□ -1.64
TRAJ48-201ENST00000390489 MICALL1Q8N3F8 863 aa4.83□□□□□ -1.64
TRAJ48-201ENST00000390489 STAG2Q8N3U4 1231 aa4.83□□□□□ -1.64
TRAJ48-201ENST00000390489 GAS2L2Q8NHY3 880 aa4.83□□□□□ -1.64
TRAJ48-201ENST00000390489 CEP63Q96MT8 703 aa4.83□□□□□ -1.64
TRAJ48-201ENST00000390489 BRD7Q9NPI1 651 aa4.83□□□□□ -1.64
TRAJ48-201ENST00000390489 KCNH4Q9UQ05 1017 aa4.83□□□□□ -1.64
TRAJ48-201ENST00000390489 USP17L3A6NCW0 530 aa4.82□□□□□ -1.64
TRAJ48-201ENST00000390489 USP17L4A6NCW7 530 aa4.82□□□□□ -1.64
TRAJ48-201ENST00000390489 PALM3A6NDB9 673 aaPredicted RBP4.82□□□□□ -1.64
TRAJ48-201ENST00000390489 C9orf172C9J069 976 aa4.82□□□□□ -1.64
TRAJ48-201ENST00000390489 ZBTB7BO15156 539 aaPredicted RBP4.82□□□□□ -1.64
TRAJ48-201ENST00000390489 FLIIQ13045 1269 aa4.82□□□□□ -1.64
TRAJ48-201ENST00000390489 RSPO4Q2I0M5 234 aaPredicted RBP4.82□□□□□ -1.64
TRAJ48-201ENST00000390489 NKAPLQ5M9Q1 402 aa4.82□□□□□ -1.64
TRAJ48-201ENST00000390489 USP17L2Q6R6M4 530 aa4.82□□□□□ -1.64
TRAJ48-201ENST00000390489 USP17L1Q7RTZ2 530 aa4.82□□□□□ -1.64
TRAJ48-201ENST00000390489 SLC30A3Q99726 388 aa4.82□□□□□ -1.64
TRAJ48-201ENST00000390489 STARD13Q9Y3M8 1113 aa4.82□□□□□ -1.64
TRAJ48-201ENST00000390489 ATP9BO43861 1147 aa4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 LILRB5O75023 590 aa4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 ALBP02768 609 aa4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 NID1P14543 1247 aa4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 ITGB7P26010 798 aa4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 NRG1Q02297 640 aaPredicted RBP4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 TYRO3Q06418 890 aa4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 COL9A3Q14050 684 aaPredicted RBP4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 C20orf204Q6ZNR8 217 aa4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 SIX5Q8N196 739 aa4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 DEPDC4Q8N2C3 294 aa4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 PHACTR1Q9C0D0 580 aa4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 TSPAN10Q9H1Z9 355 aaPredicted RBP4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 TPSG1Q9NRR2 321 aa4.81□□□□□ -1.64
TRAJ48-201ENST00000390489 SFI1A8K8P3 1242 aa4.8□□□□□ -1.64
TRAJ48-201ENST00000390489 DYRK3O43781 588 aa4.8□□□□□ -1.64
TRAJ48-201ENST00000390489 ELNP15502 786 aa4.8□□□□□ -1.64
TRAJ48-201ENST00000390489 RAC1P63000 192 aa4.8□□□□□ -1.64
TRAJ48-201ENST00000390489 TBCELQ5QJ74 424 aa4.8□□□□□ -1.64
TRAJ48-201ENST00000390489 IER5Q5VY09 327 aa4.8□□□□□ -1.64
TRAJ48-201ENST00000390489 OGFOD1Q8N543 542 aa4.8□□□□□ -1.64
TRAJ48-201ENST00000390489 SUSD3Q96L08 255 aa4.8□□□□□ -1.64
TRAJ48-201ENST00000390489 PPP1R12BO60237 982 aaPredicted RBP4.79□□□□□ -1.64
TRAJ48-201ENST00000390489 H2AFB1P0C5Y9 115 aa4.79□□□□□ -1.64
TRAJ48-201ENST00000390489 H2AFB2P0C5Z0 115 aa4.79□□□□□ -1.64
TRAJ48-201ENST00000390489 UBTFP17480 764 aaKnown RBP4.79□□□□□ -1.64
TRAJ48-201ENST00000390489 CLDN10P78369 228 aa4.79□□□□□ -1.64
TRAJ48-201ENST00000390489 PCSK7Q16549 785 aa4.79□□□□□ -1.64
TRAJ48-201ENST00000390489 TRAPPC3LQ5T215 181 aa4.79□□□□□ -1.64
TRAJ48-201ENST00000390489 SH3PXD2AQ5TCZ1 1133 aa4.79□□□□□ -1.64
TRAJ48-201ENST00000390489 HSH2DQ96JZ2 352 aa4.79□□□□□ -1.64
TRAJ48-201ENST00000390489 MKRN1Q9UHC7 482 aaKnown RBP4.79□□□□□ -1.64
TRAJ48-201ENST00000390489 KIAA1024Q9UPX6 916 aa4.79□□□□□ -1.64
TRAJ48-201ENST00000390489 HCN4Q9Y3Q4 1203 aa4.79□□□□□ -1.64
TRAJ48-201ENST00000390489 SCO2A0A1W2PP80 73 aa4.78□□□□□ -1.64
TRAJ48-201ENST00000390489 ADGRE1Q14246 886 aa4.78□□□□□ -1.64
TRAJ48-201ENST00000390489 HDGFL1Q5TGJ6 251 aa4.78□□□□□ -1.64
TRAJ48-201ENST00000390489 BTLAQ7Z6A9 289 aa4.78□□□□□ -1.64
TRAJ48-201ENST00000390489 ALDH16A1Q8IZ83 802 aa4.78□□□□□ -1.64
TRAJ48-201ENST00000390489 BHMTQ93088 406 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms