RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 VIRMAQ69YN4 1812 aaKnown RBP11.97□□□□□ -0.49
TRAV20-201ENST00000390448 SBF1O95248 1867 aa11.96□□□□□ -0.49
TRAV20-201ENST00000390448 SRGNP10124 158 aa11.96□□□□□ -0.49
TRAV20-201ENST00000390448 DCTN1Q14203 1278 aa11.96□□□□□ -0.49
TRAV20-201ENST00000390448 PRPF40BQ6NWY9 871 aaKnown RBP11.96□□□□□ -0.49
TRAV20-201ENST00000390448 CLEC4GQ6UXB4 293 aa11.96□□□□□ -0.49
TRAV20-201ENST00000390448 NIP7Q9Y221 180 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAV20-201ENST00000390448 UBR2Q8IWV8 1755 aa11.96□□□□□ -0.49
TRAV20-201ENST00000390448 TNRC6CQ9HCJ0 1690 aaKnown RBP11.96□□□□□ -0.5
TRAV20-201ENST00000390448 NRXN2Q9P2S2 1712 aa11.95□□□□□ -0.5
TRAV20-201ENST00000390448 PRAMEF22A3QJZ6 481 aa11.95□□□□□ -0.5
TRAV20-201ENST00000390448 HTATSF1O43719 755 aaKnown RBP11.95□□□□□ -0.5
TRAV20-201ENST00000390448 TAF7Q15545 349 aaPredicted RBP11.95□□□□□ -0.5
TRAV20-201ENST00000390448 WDR90Q96KV7 1748 aa11.94□□□□□ -0.5
TRAV20-201ENST00000390448 NPR1P16066 1061 aa11.94□□□□□ -0.5
TRAV20-201ENST00000390448 NGEFQ8N5V2 710 aa11.94□□□□□ -0.5
TRAV20-201ENST00000390448 JMYQ8N9B5 988 aa11.94□□□□□ -0.5
TRAV20-201ENST00000390448 MIS18AQ9NYP9 233 aa11.94□□□□□ -0.5
TRAV20-201ENST00000390448 LTBP3Q9NS15 1303 aa11.93□□□□□ -0.5
TRAV20-201ENST00000390448 DDNO94850 711 aaPredicted RBP11.93□□□□□ -0.5
TRAV20-201ENST00000390448 CCDC93Q567U6 631 aa11.93□□□□□ -0.5
TRAV20-201ENST00000390448 PNISRQ8TF01 805 aaKnown RBP11.93□□□□□ -0.5
TRAV20-201ENST00000390448 IQCA1LA6NCM1 817 aa11.92□□□□□ -0.5
TRAV20-201ENST00000390448 ALDH1B1P30837 517 aa11.92□□□□□ -0.5
TRAV20-201ENST00000390448 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
TRAV20-201ENST00000390448 RTKN2Q8IZC4 609 aa11.92□□□□□ -0.5
TRAV20-201ENST00000390448 DLEC1Q9Y238 1755 aa11.92□□□□□ -0.5
TRAV20-201ENST00000390448 SCN7AQ01118 1682 aa11.91□□□□□ -0.5
TRAV20-201ENST00000390448 POTECB2RU33 542 aa11.91□□□□□ -0.5
TRAV20-201ENST00000390448 NBPF26B4DH59 902 aa11.91□□□□□ -0.5
TRAV20-201ENST00000390448 COL13A1Q5TAT6 717 aaPredicted RBP11.91□□□□□ -0.5
TRAV20-201ENST00000390448 NBPF10Q6P3W6 841 aaKnown RBP11.91□□□□□ -0.5
TRAV20-201ENST00000390448 KIF6Q6ZMV9 814 aa11.91□□□□□ -0.5
TRAV20-201ENST00000390448 TNS4Q8IZW8 715 aa11.91□□□□□ -0.5
TRAV20-201ENST00000390448 NBPF15Q8N660 670 aa11.91□□□□□ -0.5
TRAV20-201ENST00000390448 PNNQ9H307 717 aaKnown RBP11.91□□□□□ -0.5
TRAV20-201ENST00000390448 RRP7AQ9Y3A4 280 aaKnown RBP11.91□□□□□ -0.5
TRAV20-201ENST00000390448 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
TRAV20-201ENST00000390448 CAPN15O75808 1086 aa11.9□□□□□ -0.5
TRAV20-201ENST00000390448 FKBP4Q02790 459 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRAV20-201ENST00000390448 EAPPQ56P03 285 aaPredicted RBP11.9□□□□□ -0.5
TRAV20-201ENST00000390448 NYXQ9GZU5 481 aa11.9□□□□□ -0.5
TRAV20-201ENST00000390448 ZNF277Q9NRM2 450 aaPredicted RBP11.9□□□□□ -0.5
TRAV20-201ENST00000390448 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
TRAV20-201ENST00000390448 SIPA1L3O60292 1781 aaPredicted RBP11.9□□□□□ -0.51
TRAV20-201ENST00000390448 CCDC88AQ3V6T2 1871 aa11.89□□□□□ -0.51
TRAV20-201ENST00000390448 TIAM2Q8IVF5 1701 aa11.89□□□□□ -0.51
TRAV20-201ENST00000390448 RGL2O15211 777 aa11.89□□□□□ -0.51
TRAV20-201ENST00000390448 HSPA1AP0DMV8 641 aaKnown RBP11.89□□□□□ -0.51
TRAV20-201ENST00000390448 HSPA1BP0DMV9 641 aaKnown RBP11.89□□□□□ -0.51
TRAV20-201ENST00000390448 MYL6BP14649 208 aa11.89□□□□□ -0.51
TRAV20-201ENST00000390448 HLFQ16534 295 aa11.89□□□□□ -0.51
TRAV20-201ENST00000390448 RPGRQ92834 1020 aaKnown RBP11.89□□□□□ -0.51
TRAV20-201ENST00000390448 TMX4Q9H1E5 349 aaPredicted RBP11.89□□□□□ -0.51
TRAV20-201ENST00000390448 ANKRD31Q8N7Z5 1873 aa11.89□□□□□ -0.51
TRAV20-201ENST00000390448 KLRG2A4D1S0 409 aaPredicted RBP11.88□□□□□ -0.51
TRAV20-201ENST00000390448 LDHDQ86WU2 507 aa11.88□□□□□ -0.51
TRAV20-201ENST00000390448 C7orf43Q8WVR3 580 aa11.88□□□□□ -0.51
TRAV20-201ENST00000390448 JDP2Q8WYK2 163 aa11.88□□□□□ -0.51
TRAV20-201ENST00000390448 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
TRAV20-201ENST00000390448 MKRN1Q9UHC7 482 aaKnown RBP11.88□□□□□ -0.51
TRAV20-201ENST00000390448 ERVV-1B6SEH8 477 aa11.87□□□□□ -0.51
TRAV20-201ENST00000390448 POTEIP0CG38 1075 aa11.87□□□□□ -0.51
TRAV20-201ENST00000390448 POTEJP0CG39 1038 aa11.87□□□□□ -0.51
TRAV20-201ENST00000390448 GPTP24298 496 aa11.87□□□□□ -0.51
TRAV20-201ENST00000390448 NFE2L2Q16236 605 aa11.87□□□□□ -0.51
TRAV20-201ENST00000390448 OLFM4Q6UX06 510 aa11.87□□□□□ -0.51
TRAV20-201ENST00000390448 NUTM1Q86Y26 1132 aa11.87□□□□□ -0.51
TRAV20-201ENST00000390448 SYNE4Q8N205 404 aa11.87□□□□□ -0.51
TRAV20-201ENST00000390448 TAF1DQ9H5J8 278 aaPredicted RBP11.87□□□□□ -0.51
TRAV20-201ENST00000390448 HACL1Q9UJ83 578 aa11.87□□□□□ -0.51
TRAV20-201ENST00000390448 SLX4Q8IY92 1834 aa11.87□□□□□ -0.51
TRAV20-201ENST00000390448 COL11A2P13942 1736 aaPredicted RBP11.86□□□□□ -0.51
TRAV20-201ENST00000390448 IARSP41252 1262 aaKnown RBP11.86□□□□□ -0.51
TRAV20-201ENST00000390448 EIF4A1P60842 406 aaKnown RBP11.86□□□□□ -0.51
TRAV20-201ENST00000390448 L3MBTL3Q96JM7 780 aaPredicted RBP11.86□□□□□ -0.51
TRAV20-201ENST00000390448 THUMPD2Q9BTF0 503 aaKnown RBP11.86□□□□□ -0.51
TRAV20-201ENST00000390448 ZBTB3Q9H5J0 574 aa11.86□□□□□ -0.51
TRAV20-201ENST00000390448 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
TRAV20-201ENST00000390448 FER1L6Q2WGJ9 1857 aa11.85□□□□□ -0.51
TRAV20-201ENST00000390448 TCERG1O14776 1098 aaKnown RBP11.85□□□□□ -0.51
TRAV20-201ENST00000390448 EPHX2P34913 555 aa11.85□□□□□ -0.51
TRAV20-201ENST00000390448 EIF6P56537 245 aaKnown RBP11.85□□□□□ -0.51
TRAV20-201ENST00000390448 CC2D2BQ6DHV5 1058 aa11.85□□□□□ -0.51
TRAV20-201ENST00000390448 TTLL7Q6ZT98 887 aa11.85□□□□□ -0.51
TRAV20-201ENST00000390448 PNMA8AQ86V59 439 aaPredicted RBP11.85□□□□□ -0.51
TRAV20-201ENST00000390448 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
TRAV20-201ENST00000390448 TSPYL4Q9UJ04 414 aa11.85□□□□□ -0.51
TRAV20-201ENST00000390448 GJA3Q9Y6H8 435 aa11.85□□□□□ -0.51
TRAV20-201ENST00000390448 ZNF541Q9H0D2 1346 aa11.85□□□□□ -0.51
TRAV20-201ENST00000390448 BCORQ6W2J9 1755 aa11.84□□□□□ -0.51
TRAV20-201ENST00000390448 EIF2S2P20042 333 aaKnown RBP11.84□□□□□ -0.51
TRAV20-201ENST00000390448 LMOD1P29536 600 aaPredicted RBP11.84□□□□□ -0.51
TRAV20-201ENST00000390448 GRIPAP1Q4V328 841 aa11.84□□□□□ -0.51
TRAV20-201ENST00000390448 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
TRAV20-201ENST00000390448 AIDAQ96BJ3 306 aa11.84□□□□□ -0.51
TRAV20-201ENST00000390448 DICER1Q9UPY3 1922 aaKnown RBP11.84□□□□□ -0.51
TRAV20-201ENST00000390448 CACNA1SQ13698 1873 aa11.83□□□□□ -0.52
TRAV20-201ENST00000390448 TMEM88BA6NKF7 163 aa11.83□□□□□ -0.52
TRAV20-201ENST00000390448 GPC2Q8N158 579 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms