RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 ZNF277Q9NRM2 450 aaPredicted RBP13.24□□□□□ -0.29
TRAV18-201ENST00000390446 RNF123Q5XPI4 1314 aa13.23□□□□□ -0.29
TRAV18-201ENST00000390446 SRGNP10124 158 aa13.23□□□□□ -0.29
TRAV18-201ENST00000390446 LMOD1P29536 600 aaPredicted RBP13.23□□□□□ -0.29
TRAV18-201ENST00000390446 EIF5P55010 431 aaKnown RBP13.23□□□□□ -0.29
TRAV18-201ENST00000390446 GPR101Q96P66 508 aaPredicted RBP13.23□□□□□ -0.29
TRAV18-201ENST00000390446 TEX13AQ9BXU3 409 aaPredicted RBP13.23□□□□□ -0.29
TRAV18-201ENST00000390446 NRXN2Q9P2S2 1712 aa13.22□□□□□ -0.29
TRAV18-201ENST00000390446 HMOX1P09601 288 aa13.22□□□□□ -0.29
TRAV18-201ENST00000390446 FKBP4Q02790 459 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRAV18-201ENST00000390446 NBPF5PQ86XG9 351 aaPredicted RBP13.22□□□□□ -0.29
TRAV18-201ENST00000390446 RTKN2Q8IZC4 609 aa13.22□□□□□ -0.29
TRAV18-201ENST00000390446 JDP2Q8WYK2 163 aa13.22□□□□□ -0.29
TRAV18-201ENST00000390446 CAPNS2Q96L46 248 aa13.22□□□□□ -0.29
TRAV18-201ENST00000390446 PANK3Q9H999 370 aa13.22□□□□□ -0.29
TRAV18-201ENST00000390446 TSKSQ9UJT2 592 aa13.22□□□□□ -0.29
TRAV18-201ENST00000390446 GJA3Q9Y6H8 435 aa13.22□□□□□ -0.29
TRAV18-201ENST00000390446 ADAMTS7Q9UKP4 1686 aa13.21□□□□□ -0.29
TRAV18-201ENST00000390446 ZNF541Q9H0D2 1346 aa13.21□□□□□ -0.29
TRAV18-201ENST00000390446 GTF2E1P29083 439 aaPredicted RBP13.21□□□□□ -0.29
TRAV18-201ENST00000390446 TEFQ10587 303 aa13.21□□□□□ -0.29
TRAV18-201ENST00000390446 DDX21Q9NR30 783 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRAV18-201ENST00000390446 DICER1Q9UPY3 1922 aaKnown RBP13.21□□□□□ -0.3
TRAV18-201ENST00000390446 NPR1P16066 1061 aa13.2□□□□□ -0.3
TRAV18-201ENST00000390446 EIF6P56537 245 aaKnown RBP13.2□□□□□ -0.3
TRAV18-201ENST00000390446 CYP4F22Q6NT55 531 aa13.2□□□□□ -0.3
TRAV18-201ENST00000390446 FER1L6Q2WGJ9 1857 aa13.19□□□□□ -0.3
TRAV18-201ENST00000390446 SCN4AP35499 1836 aa13.19□□□□□ -0.3
TRAV18-201ENST00000390446 FAM177BA6PVY3 158 aa13.19□□□□□ -0.3
TRAV18-201ENST00000390446 IL13P35225 146 aa13.19□□□□□ -0.3
TRAV18-201ENST00000390446 IL6STP40189 918 aaPredicted RBP13.19□□□□□ -0.3
TRAV18-201ENST00000390446 IARSP41252 1262 aaKnown RBP13.19□□□□□ -0.3
TRAV18-201ENST00000390446 RGS19P49795 217 aa13.19□□□□□ -0.3
TRAV18-201ENST00000390446 DZIP3Q86Y13 1208 aaKnown RBP13.19□□□□□ -0.3
TRAV18-201ENST00000390446 GPC2Q8N158 579 aa13.19□□□□□ -0.3
TRAV18-201ENST00000390446 SYNE4Q8N205 404 aa13.19□□□□□ -0.3
TRAV18-201ENST00000390446 SCN11AQ9UI33 1791 aa13.19□□□□□ -0.3
TRAV18-201ENST00000390446 A1BGP04217 495 aa13.18□□□□□ -0.3
TRAV18-201ENST00000390446 ALDH1B1P30837 517 aa13.18□□□□□ -0.3
TRAV18-201ENST00000390446 MTHFSDQ2M296 383 aaKnown RBP13.18□□□□□ -0.3
TRAV18-201ENST00000390446 TPTE2Q6XPS3 522 aa13.18□□□□□ -0.3
TRAV18-201ENST00000390446 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
TRAV18-201ENST00000390446 ZNF652Q9Y2D9 606 aa13.18□□□□□ -0.3
TRAV18-201ENST00000390446 KNSTRNQ9Y448 316 aa13.18□□□□□ -0.3
TRAV18-201ENST00000390446 DGKZQ13574 1117 aa13.17□□□□□ -0.3
TRAV18-201ENST00000390446 MCOLN1Q9GZU1 580 aa13.17□□□□□ -0.3
TRAV18-201ENST00000390446 VIRMAQ69YN4 1812 aaKnown RBP13.17□□□□□ -0.3
TRAV18-201ENST00000390446 SLX4Q8IY92 1834 aa13.17□□□□□ -0.3
TRAV18-201ENST00000390446 PCNTO95613 3336 aa13.16□□□□□ -0.3
TRAV18-201ENST00000390446 CAMTA2O94983 1202 aa13.16□□□□□ -0.3
TRAV18-201ENST00000390446 ZNF790Q6PG37 636 aa13.16□□□□□ -0.3
TRAV18-201ENST00000390446 OLFM4Q6UX06 510 aa13.16□□□□□ -0.3
TRAV18-201ENST00000390446 FMNL2Q96PY5 1086 aa13.16□□□□□ -0.3
TRAV18-201ENST00000390446 ANKRD31Q8N7Z5 1873 aa13.16□□□□□ -0.3
TRAV18-201ENST00000390446 CACNA1SQ13698 1873 aa13.15□□□□□ -0.3
TRAV18-201ENST00000390446 FZD9O00144 591 aa13.15□□□□□ -0.3
TRAV18-201ENST00000390446 AOC2O75106 756 aa13.15□□□□□ -0.3
TRAV18-201ENST00000390446 MAP2K2P36507 400 aa13.15□□□□□ -0.3
TRAV18-201ENST00000390446 FMR1Q06787 632 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAV18-201ENST00000390446 C7orf43Q8WVR3 580 aa13.15□□□□□ -0.3
TRAV18-201ENST00000390446 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.3
TRAV18-201ENST00000390446 COL11A2P13942 1736 aaPredicted RBP13.14□□□□□ -0.31
TRAV18-201ENST00000390446 CA12O43570 354 aa13.14□□□□□ -0.31
TRAV18-201ENST00000390446 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
TRAV18-201ENST00000390446 NIP7Q9Y221 180 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRAV18-201ENST00000390446 GNAT3A8MTJ3 354 aa13.13□□□□□ -0.31
TRAV18-201ENST00000390446 TRAF5O00463 557 aa13.13□□□□□ -0.31
TRAV18-201ENST00000390446 DIAPH1O60610 1272 aaKnown RBP13.13□□□□□ -0.31
TRAV18-201ENST00000390446 EPS15P42566 896 aa13.13□□□□□ -0.31
TRAV18-201ENST00000390446 LARGE2Q8N3Y3 721 aa13.13□□□□□ -0.31
TRAV18-201ENST00000390446 TMX4Q9H1E5 349 aaPredicted RBP13.13□□□□□ -0.31
TRAV18-201ENST00000390446 ZNF408Q9H9D4 720 aa13.13□□□□□ -0.31
TRAV18-201ENST00000390446 TLL2Q9Y6L7 1015 aa13.13□□□□□ -0.31
TRAV18-201ENST00000390446 BTBD11A6QL63 1104 aa13.12□□□□□ -0.31
TRAV18-201ENST00000390446 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
TRAV18-201ENST00000390446 U2SURPO15042 1029 aaKnown RBP13.12□□□□□ -0.31
TRAV18-201ENST00000390446 CELF2O95319 508 aaKnown RBP13.12□□□□□ -0.31
TRAV18-201ENST00000390446 CLEC4GQ6UXB4 293 aa13.12□□□□□ -0.31
TRAV18-201ENST00000390446 USP50Q70EL3 339 aaPredicted RBP13.12□□□□□ -0.31
TRAV18-201ENST00000390446 MRC1P22897 1456 aa13.11□□□□□ -0.31
TRAV18-201ENST00000390446 CST9Q5W186 159 aa13.11□□□□□ -0.31
TRAV18-201ENST00000390446 NIM1KQ8IY84 436 aa13.11□□□□□ -0.31
TRAV18-201ENST00000390446 RPGRQ92834 1020 aaKnown RBP13.11□□□□□ -0.31
TRAV18-201ENST00000390446 CC2D2BQ6DHV5 1058 aa13.1□□□□□ -0.31
TRAV18-201ENST00000390446 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
TRAV18-201ENST00000390446 PSMD1Q99460 953 aa13.1□□□□□ -0.31
TRAV18-201ENST00000390446 SCN7AQ01118 1682 aa13.09□□□□□ -0.31
TRAV18-201ENST00000390446 EIF4G2P78344 907 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRAV18-201ENST00000390446 CNGB1Q14028 1251 aaPredicted RBP13.09□□□□□ -0.31
TRAV18-201ENST00000390446 CIAPIN1Q6FI81 312 aa13.09□□□□□ -0.31
TRAV18-201ENST00000390446 IL17REQ8NFR9 667 aa13.09□□□□□ -0.31
TRAV18-201ENST00000390446 USP16Q9Y5T5 823 aa13.09□□□□□ -0.31
TRAV18-201ENST00000390446 BRPF1P55201 1214 aaPredicted RBP13.08□□□□□ -0.32
TRAV18-201ENST00000390446 SOX10P56693 466 aa13.08□□□□□ -0.32
TRAV18-201ENST00000390446 SAPCD2Q86UD0 394 aa13.08□□□□□ -0.32
TRAV18-201ENST00000390446 ADARB2Q9NS39 739 aaKnown RBP13.08□□□□□ -0.32
TRAV18-201ENST00000390446 ADAMTSL1Q8N6G6 1762 aa13.07□□□□□ -0.32
TRAV18-201ENST00000390446 KLRG2A4D1S0 409 aaPredicted RBP13.07□□□□□ -0.32
TRAV18-201ENST00000390446 PPIP5K2O43314 1243 aa13.07□□□□□ -0.32
TRAV18-201ENST00000390446 KCNQ3O43525 872 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms