RNA–Protein interactions for RNA: ENST00000390387.3

TRBV3-1-201, Transcript of T cell receptor beta variable 3-1, humanhuman

APPRIS P1 BASIC

Gene TRBV3-1, Length 391 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV3-1-201ENST00000390387 BCORQ6W2J9 1755 aa12.55□□□□□ -0.4
TRBV3-1-201ENST00000390387 LTBP3Q9NS15 1303 aa12.55□□□□□ -0.4
TRBV3-1-201ENST00000390387 BTBD11A6QL63 1104 aa12.54□□□□□ -0.4
TRBV3-1-201ENST00000390387 PRKAR2BP31323 418 aa12.54□□□□□ -0.4
TRBV3-1-201ENST00000390387 ERFEQ4G0M1 354 aa12.54□□□□□ -0.4
TRBV3-1-201ENST00000390387 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
TRBV3-1-201ENST00000390387 RSPH6AQ9H0K4 717 aa12.54□□□□□ -0.4
TRBV3-1-201ENST00000390387 TAOK3Q9H2K8 898 aa12.54□□□□□ -0.4
TRBV3-1-201ENST00000390387 DICER1Q9UPY3 1922 aaKnown RBP12.54□□□□□ -0.4
TRBV3-1-201ENST00000390387 SRGNP10124 158 aa12.53□□□□□ -0.4
TRBV3-1-201ENST00000390387 PIP4K2AP48426 406 aaPredicted RBP12.53□□□□□ -0.4
TRBV3-1-201ENST00000390387 STYK1Q6J9G0 422 aa12.53□□□□□ -0.4
TRBV3-1-201ENST00000390387 PRPF40BQ6NWY9 871 aaKnown RBP12.53□□□□□ -0.4
TRBV3-1-201ENST00000390387 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
TRBV3-1-201ENST00000390387 DZIP3Q86Y13 1208 aaKnown RBP12.53□□□□□ -0.4
TRBV3-1-201ENST00000390387 CNKSR1Q969H4 720 aa12.53□□□□□ -0.4
TRBV3-1-201ENST00000390387 USP16Q9Y5T5 823 aa12.53□□□□□ -0.4
TRBV3-1-201ENST00000390387 ARFGEF2Q9Y6D5 1785 aa12.53□□□□□ -0.4
TRBV3-1-201ENST00000390387 SLX4Q8IY92 1834 aa12.53□□□□□ -0.4
TRBV3-1-201ENST00000390387 PRAMEF22A3QJZ6 481 aa12.52□□□□□ -0.41
TRBV3-1-201ENST00000390387 ST5P78524 1137 aa12.52□□□□□ -0.41
TRBV3-1-201ENST00000390387 MASTLQ96GX5 879 aa12.52□□□□□ -0.41
TRBV3-1-201ENST00000390387 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
TRBV3-1-201ENST00000390387 NPHP1O15259 732 aa12.51□□□□□ -0.41
TRBV3-1-201ENST00000390387 DDNO94850 711 aaPredicted RBP12.51□□□□□ -0.41
TRBV3-1-201ENST00000390387 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
TRBV3-1-201ENST00000390387 POTEJP0CG39 1038 aa12.51□□□□□ -0.41
TRBV3-1-201ENST00000390387 HSPA1AP0DMV8 641 aaKnown RBP12.51□□□□□ -0.41
TRBV3-1-201ENST00000390387 HSPA1BP0DMV9 641 aaKnown RBP12.51□□□□□ -0.41
TRBV3-1-201ENST00000390387 CACNA1SQ13698 1873 aa12.51□□□□□ -0.41
TRBV3-1-201ENST00000390387 SOGA3Q5TF21 947 aa12.5□□□□□ -0.41
TRBV3-1-201ENST00000390387 CHADLQ6NUI6 762 aa12.5□□□□□ -0.41
TRBV3-1-201ENST00000390387 CLEC4GQ6UXB4 293 aa12.5□□□□□ -0.41
TRBV3-1-201ENST00000390387 NBPF5PQ86XG9 351 aaPredicted RBP12.5□□□□□ -0.41
TRBV3-1-201ENST00000390387 TNS4Q8IZW8 715 aa12.5□□□□□ -0.41
TRBV3-1-201ENST00000390387 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
TRBV3-1-201ENST00000390387 KLRG2A4D1S0 409 aaPredicted RBP12.49□□□□□ -0.41
TRBV3-1-201ENST00000390387 SNRPA1P09661 255 aaKnown RBP12.49□□□□□ -0.41
TRBV3-1-201ENST00000390387 DSG3P32926 999 aa12.49□□□□□ -0.41
TRBV3-1-201ENST00000390387 MCM10Q7L590 875 aa12.49□□□□□ -0.41
TRBV3-1-201ENST00000390387 CFAP53Q96M91 514 aa12.49□□□□□ -0.41
TRBV3-1-201ENST00000390387 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
TRBV3-1-201ENST00000390387 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
TRBV3-1-201ENST00000390387 CAPN15O75808 1086 aa12.48□□□□□ -0.41
TRBV3-1-201ENST00000390387 NBPF10Q6P3W6 841 aaKnown RBP12.48□□□□□ -0.41
TRBV3-1-201ENST00000390387 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
TRBV3-1-201ENST00000390387 ZNF652Q9Y2D9 606 aa12.48□□□□□ -0.41
TRBV3-1-201ENST00000390387 RGL2O15211 777 aa12.47□□□□□ -0.41
TRBV3-1-201ENST00000390387 U2AF1L5P0DN76 240 aaPredicted RBP12.47□□□□□ -0.41
TRBV3-1-201ENST00000390387 NPR1P16066 1061 aa12.47□□□□□ -0.41
TRBV3-1-201ENST00000390387 PPP2R1AP30153 589 aa12.47□□□□□ -0.41
TRBV3-1-201ENST00000390387 U2AF1Q01081 240 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRBV3-1-201ENST00000390387 DCTN1Q14203 1278 aa12.47□□□□□ -0.41
TRBV3-1-201ENST00000390387 CCDC93Q567U6 631 aa12.47□□□□□ -0.41
TRBV3-1-201ENST00000390387 RTF1Q92541 710 aaKnown RBP12.47□□□□□ -0.41
TRBV3-1-201ENST00000390387 L3MBTL3Q96JM7 780 aaPredicted RBP12.47□□□□□ -0.41
TRBV3-1-201ENST00000390387 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
TRBV3-1-201ENST00000390387 NUDCQ9Y266 331 aa12.47□□□□□ -0.41
TRBV3-1-201ENST00000390387 PASKQ96RG2 1323 aa12.46□□□□□ -0.41
TRBV3-1-201ENST00000390387 IQCA1LA6NCM1 817 aa12.46□□□□□ -0.41
TRBV3-1-201ENST00000390387 FKBP4Q02790 459 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRBV3-1-201ENST00000390387 OLFM4Q6UX06 510 aa12.46□□□□□ -0.41
TRBV3-1-201ENST00000390387 TPTE2Q6XPS3 522 aa12.46□□□□□ -0.41
TRBV3-1-201ENST00000390387 TAF1DQ9H5J8 278 aaPredicted RBP12.46□□□□□ -0.41
TRBV3-1-201ENST00000390387 MKRN1Q9UHC7 482 aaKnown RBP12.46□□□□□ -0.41
TRBV3-1-201ENST00000390387 NIP7Q9Y221 180 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRBV3-1-201ENST00000390387 ZNF541Q9H0D2 1346 aa12.45□□□□□ -0.42
TRBV3-1-201ENST00000390387 HTATSF1O43719 755 aaKnown RBP12.45□□□□□ -0.42
TRBV3-1-201ENST00000390387 HLFQ16534 295 aa12.45□□□□□ -0.42
TRBV3-1-201ENST00000390387 LDHDQ86WU2 507 aa12.45□□□□□ -0.42
TRBV3-1-201ENST00000390387 ZNF277Q9NRM2 450 aaPredicted RBP12.45□□□□□ -0.42
TRBV3-1-201ENST00000390387 SCN4AP35499 1836 aa12.45□□□□□ -0.42
TRBV3-1-201ENST00000390387 SNED1Q8TER0 1413 aa12.45□□□□□ -0.42
TRBV3-1-201ENST00000390387 CNTNAP1P78357 1384 aa12.44□□□□□ -0.42
TRBV3-1-201ENST00000390387 FAM177BA6PVY3 158 aa12.44□□□□□ -0.42
TRBV3-1-201ENST00000390387 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
TRBV3-1-201ENST00000390387 ADAMTSL1Q8N6G6 1762 aa12.43□□□□□ -0.42
TRBV3-1-201ENST00000390387 TAF7Q15545 349 aaPredicted RBP12.43□□□□□ -0.42
TRBV3-1-201ENST00000390387 RTKN2Q8IZC4 609 aa12.43□□□□□ -0.42
TRBV3-1-201ENST00000390387 MIS18AQ9NYP9 233 aa12.43□□□□□ -0.42
TRBV3-1-201ENST00000390387 ABCC12Q96J65 1359 aa12.43□□□□□ -0.42
TRBV3-1-201ENST00000390387 FZD9O00144 591 aa12.42□□□□□ -0.42
TRBV3-1-201ENST00000390387 ITGBL1O95965 494 aaPredicted RBP12.42□□□□□ -0.42
TRBV3-1-201ENST00000390387 ALDH1B1P30837 517 aa12.42□□□□□ -0.42
TRBV3-1-201ENST00000390387 IARSP41252 1262 aaKnown RBP12.42□□□□□ -0.42
TRBV3-1-201ENST00000390387 KDM3BQ7LBC6 1761 aa12.41□□□□□ -0.42
TRBV3-1-201ENST00000390387 CRY2Q49AN0 593 aa12.41□□□□□ -0.42
TRBV3-1-201ENST00000390387 EAPPQ56P03 285 aaPredicted RBP12.41□□□□□ -0.42
TRBV3-1-201ENST00000390387 SYNE4Q8N205 404 aa12.41□□□□□ -0.42
TRBV3-1-201ENST00000390387 HACL1Q9UJ83 578 aa12.41□□□□□ -0.42
TRBV3-1-201ENST00000390387 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.42
TRBV3-1-201ENST00000390387 ERVV-1B6SEH8 477 aa12.4□□□□□ -0.42
TRBV3-1-201ENST00000390387 FOXN1O15353 648 aa12.4□□□□□ -0.42
TRBV3-1-201ENST00000390387 GTF2E1P29083 439 aaPredicted RBP12.4□□□□□ -0.42
TRBV3-1-201ENST00000390387 EPHX2P34913 555 aa12.4□□□□□ -0.42
TRBV3-1-201ENST00000390387 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.42
TRBV3-1-201ENST00000390387 PSMD1Q99460 953 aa12.4□□□□□ -0.42
TRBV3-1-201ENST00000390387 COL4A5P29400 1685 aa12.4□□□□□ -0.42
TRBV3-1-201ENST00000390387 MAP3K15Q6ZN16 1313 aa12.39□□□□□ -0.43
TRBV3-1-201ENST00000390387 RIC1Q4ADV7 1423 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms