RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 HCLS1P14317 486 aaPredicted RBP22.35■■□□□ 1.17
CSPG5-202ENST00000383738 KSR2Q6VAB6 950 aa22.35■■□□□ 1.17
CSPG5-202ENST00000383738 DCAF5Q96JK2 942 aa22.35■■□□□ 1.17
CSPG5-202ENST00000383738 SBNO2Q9Y2G9 1366 aa22.35■■□□□ 1.17
CSPG5-202ENST00000383738 PRAMEF22A3QJZ6 481 aa22.35■■□□□ 1.17
CSPG5-202ENST00000383738 SKIDA1Q1XH10 827 aa22.35■■□□□ 1.17
CSPG5-202ENST00000383738 RHPN1Q8TCX5 695 aa22.35■■□□□ 1.17
CSPG5-202ENST00000383738 USP16Q9Y5T5 823 aa22.35■■□□□ 1.17
CSPG5-202ENST00000383738 A2ML1A8K2U0 1454 aa22.35■■□□□ 1.17
CSPG5-202ENST00000383738 GRM8O00222 908 aa22.35■■□□□ 1.17
CSPG5-202ENST00000383738 DDX46Q7L014 1031 aaKnown RBP22.35■■□□□ 1.17
CSPG5-202ENST00000383738 ZFYVE9O95405 1425 aa22.34■■□□□ 1.17
CSPG5-202ENST00000383738 PIBF1Q8WXW3 757 aa22.34■■□□□ 1.17
CSPG5-202ENST00000383738 IFIT1P09914 478 aaKnown RBP22.34■■□□□ 1.17
CSPG5-202ENST00000383738 IGHMBP2P38935 993 aaKnown RBP22.34■■□□□ 1.17
CSPG5-202ENST00000383738 FAM89AQ96GI7 184 aa22.34■■□□□ 1.17
CSPG5-202ENST00000383738 TCEANC2Q96MN5 208 aa22.34■■□□□ 1.17
CSPG5-202ENST00000383738 GOLIM4O00461 696 aa22.34■■□□□ 1.17
CSPG5-202ENST00000383738 NBPF7P0C2Y1 421 aaPredicted RBP22.33■■□□□ 1.17
CSPG5-202ENST00000383738 CPLX2Q6PUV4 134 aaKnown RBP22.33■■□□□ 1.17
CSPG5-202ENST00000383738 C16orf45Q96MC5 204 aaPredicted RBP22.33■■□□□ 1.17
CSPG5-202ENST00000383738 GLRX3O76003 335 aaKnown RBP22.33■■□□□ 1.16
CSPG5-202ENST00000383738 CLSTN1O94985 981 aa22.33■■□□□ 1.16
CSPG5-202ENST00000383738 RAB3GAP1Q15042 981 aa22.32■■□□□ 1.16
CSPG5-202ENST00000383738 ANKRD44Q8N8A2 993 aa22.32■■□□□ 1.16
CSPG5-202ENST00000383738 ARHGAP45Q92619 1136 aa22.32■■□□□ 1.16
CSPG5-202ENST00000383738 CWC22Q9HCG8 908 aaKnown RBP22.32■■□□□ 1.16
CSPG5-202ENST00000383738 USP19O94966 1318 aa22.32■■□□□ 1.16
CSPG5-202ENST00000383738 CFAP74Q9C0B2 1584 aa22.32■■□□□ 1.16
CSPG5-202ENST00000383738 ZBTB7BO15156 539 aaPredicted RBP22.32■■□□□ 1.16
CSPG5-202ENST00000383738 PLEKHF1Q96S99 279 aa22.32■■□□□ 1.16
CSPG5-202ENST00000383738 ATP2B2Q01814 1243 aa22.31■■□□□ 1.16
CSPG5-202ENST00000383738 FILIP1Q7Z7B0 1213 aa22.31■■□□□ 1.16
CSPG5-202ENST00000383738 KIAA0232Q92628 1395 aa22.31■■□□□ 1.16
CSPG5-202ENST00000383738 MARCH6O60337 910 aa22.31■■□□□ 1.16
CSPG5-202ENST00000383738 SDSP20132 328 aa22.31■■□□□ 1.16
CSPG5-202ENST00000383738 DNAJC10Q8IXB1 793 aa22.31■■□□□ 1.16
CSPG5-202ENST00000383738 CEP85Q6P2H3 762 aa22.31■■□□□ 1.16
CSPG5-202ENST00000383738 ZKSCAN5Q9Y2L8 839 aa22.31■■□□□ 1.16
CSPG5-202ENST00000383738 DDX11Q96FC9 970 aa22.3■■□□□ 1.16
CSPG5-202ENST00000383738 NPHP4O75161 1426 aaPredicted RBP22.3■■□□□ 1.16
CSPG5-202ENST00000383738 NCBP3Q53F19 620 aaKnown RBP22.3■■□□□ 1.16
CSPG5-202ENST00000383738 CCDC82Q8N4S0 544 aa22.3■■□□□ 1.16
CSPG5-202ENST00000383738 TRIM34Q9BYJ4 488 aa22.3■■□□□ 1.16
CSPG5-202ENST00000383738 ADCY5O95622 1261 aa22.3■■□□□ 1.16
CSPG5-202ENST00000383738 CASTP20810 708 aaKnown RBP22.3■■□□□ 1.16
CSPG5-202ENST00000383738 RIMBP3CA6NJZ7 1639 aa22.3■■□□□ 1.16
CSPG5-202ENST00000383738 RIMBP3BA6NNM3 1639 aa22.3■■□□□ 1.16
CSPG5-202ENST00000383738 RIMBP3Q9UFD9 1639 aa22.3■■□□□ 1.16
CSPG5-202ENST00000383738 NLRP1Q9C000 1473 aa22.3■■□□□ 1.16
CSPG5-202ENST00000383738 ERICH2A1L162 156 aa22.29■■□□□ 1.16
CSPG5-202ENST00000383738 AXIN2Q9Y2T1 843 aa22.29■■□□□ 1.16
CSPG5-202ENST00000383738 BCORL1Q5H9F3 1711 aa22.29■■□□□ 1.16
CSPG5-202ENST00000383738 KIF1BO60333 1816 aa22.29■■□□□ 1.16
CSPG5-202ENST00000383738 ANTXR1Q9H6X2 564 aa22.29■■□□□ 1.16
CSPG5-202ENST00000383738 ANKIB1Q9P2G1 1089 aa22.29■■□□□ 1.16
CSPG5-202ENST00000383738 NDUFB9Q9Y6M9 179 aa22.29■■□□□ 1.16
CSPG5-202ENST00000383738 NUCB1Q02818 461 aa22.29■■□□□ 1.16
CSPG5-202ENST00000383738 BBXQ8WY36 941 aaPredicted RBP22.29■■□□□ 1.16
CSPG5-202ENST00000383738 NIP7Q9Y221 180 aaKnown RBP eCLIP22.28■■□□□ 1.16
CSPG5-202ENST00000383738 CYP46A1Q9Y6A2 500 aa22.28■■□□□ 1.16
CSPG5-202ENST00000383738 HAND2P61296 217 aa22.28■■□□□ 1.16
CSPG5-202ENST00000383738 PKP1Q13835 747 aa22.28■■□□□ 1.16
CSPG5-202ENST00000383738 RAB11FIP4Q86YS3 637 aa22.28■■□□□ 1.16
CSPG5-202ENST00000383738 AMOTL1Q8IY63 956 aa22.28■■□□□ 1.16
CSPG5-202ENST00000383738 HSP90AB3PQ58FF7 597 aa22.28■■□□□ 1.16
CSPG5-202ENST00000383738 BMP2KLQ5H9B9 411 aa22.28■■□□□ 1.16
CSPG5-202ENST00000383738 ARHGEF25Q86VW2 580 aa22.28■■□□□ 1.16
CSPG5-202ENST00000383738 ECHDC1Q9NTX5 307 aa22.28■■□□□ 1.16
CSPG5-202ENST00000383738 JAG2Q9Y219 1238 aa22.28■■□□□ 1.16
CSPG5-202ENST00000383738 LINS1Q8NG48 757 aa22.28■■□□□ 1.16
CSPG5-202ENST00000383738 PLXNC1O60486 1568 aa22.27■■□□□ 1.16
CSPG5-202ENST00000383738 PNMA6EA0A0J9YXQ4 647 aa22.27■■□□□ 1.16
CSPG5-202ENST00000383738 DYNC1I1O14576 645 aa22.27■■□□□ 1.16
CSPG5-202ENST00000383738 RBM5P52756 815 aaKnown RBP eCLIP22.27■■□□□ 1.16
CSPG5-202ENST00000383738 MYOM2P54296 1465 aa22.27■■□□□ 1.16
CSPG5-202ENST00000383738 HTATSF1O43719 755 aaKnown RBP22.27■■□□□ 1.16
CSPG5-202ENST00000383738 CCDC112Q8NEF3 446 aa22.27■■□□□ 1.16
CSPG5-202ENST00000383738 AK7Q96M32 723 aa22.27■■□□□ 1.16
CSPG5-202ENST00000383738 ABCA9Q8IUA7 1624 aa22.27■■□□□ 1.16
CSPG5-202ENST00000383738 BLOC1S2Q6QNY1 142 aa22.27■■□□□ 1.15
CSPG5-202ENST00000383738 FAM177A1Q8N128 213 aaPredicted RBP22.27■■□□□ 1.15
CSPG5-202ENST00000383738 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.27■■□□□ 1.15
CSPG5-202ENST00000383738 V9GYY5 206 aaPredicted RBP22.27■■□□□ 1.15
CSPG5-202ENST00000383738 PDE1AP54750 535 aa22.26■■□□□ 1.15
CSPG5-202ENST00000383738 HDAC1Q13547 482 aaPredicted RBP22.26■■□□□ 1.15
CSPG5-202ENST00000383738 DZIP3Q86Y13 1208 aaKnown RBP22.26■■□□□ 1.15
CSPG5-202ENST00000383738 CKAP2LQ8IYA6 745 aa22.26■■□□□ 1.15
CSPG5-202ENST00000383738 ZNF652Q9Y2D9 606 aa22.26■■□□□ 1.15
CSPG5-202ENST00000383738 MINDY4BA8MYZ0 360 aa22.26■■□□□ 1.15
CSPG5-202ENST00000383738 IQGAP3Q86VI3 1631 aa22.26■■□□□ 1.15
CSPG5-202ENST00000383738 ANKRD18BA2A2Z9 1011 aa22.26■■□□□ 1.15
CSPG5-202ENST00000383738 RFC4P35249 363 aa22.26■■□□□ 1.15
CSPG5-202ENST00000383738 GIMAP6Q6P9H5 292 aa22.26■■□□□ 1.15
CSPG5-202ENST00000383738 DDX21Q9NR30 783 aaKnown RBP eCLIP22.26■■□□□ 1.15
CSPG5-202ENST00000383738 TET3O43151 1660 aa22.26■■□□□ 1.15
CSPG5-202ENST00000383738 RNF17Q9BXT8 1623 aaKnown RBP22.26■■□□□ 1.15
CSPG5-202ENST00000383738 TRIM29Q14134 588 aa22.25■■□□□ 1.15
CSPG5-202ENST00000383738 NUP133Q8WUM0 1156 aa22.25■■□□□ 1.15
CSPG5-202ENST00000383738 BICC1Q9H694 974 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms