RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 CHAMP1Q96JM3 812 aa16.86■□□□□ 0.29
NEK4-202ENST00000383721 IL1RAPL2Q9NP60 686 aa16.86■□□□□ 0.29
NEK4-202ENST00000383721 ZSCAN23Q3MJ62 389 aa16.86■□□□□ 0.29
NEK4-202ENST00000383721 CEMIPQ8WUJ3 1361 aa16.85■□□□□ 0.29
NEK4-202ENST00000383721 MCCP23508 829 aa16.85■□□□□ 0.29
NEK4-202ENST00000383721 MCM2P49736 904 aa16.85■□□□□ 0.29
NEK4-202ENST00000383721 ANAPC15P60006 121 aa16.85■□□□□ 0.29
NEK4-202ENST00000383721 ZNF772Q68DY9 489 aaPredicted RBP16.85■□□□□ 0.29
NEK4-202ENST00000383721 GPT2Q8TD30 523 aa16.85■□□□□ 0.29
NEK4-202ENST00000383721 TRIM44Q96DX7 344 aaPredicted RBP16.85■□□□□ 0.29
NEK4-202ENST00000383721 AOX1Q06278 1338 aa16.85■□□□□ 0.29
NEK4-202ENST00000383721 CUL4AQ13619 759 aa16.85■□□□□ 0.29
NEK4-202ENST00000383721 DISP2A7MBM2 1401 aa16.85■□□□□ 0.29
NEK4-202ENST00000383721 TATP17735 454 aaPredicted RBP16.84■□□□□ 0.29
NEK4-202ENST00000383721 POTEAQ6S8J7 498 aa16.84■□□□□ 0.29
NEK4-202ENST00000383721 PPP1R42Q7Z4L9 355 aa16.84■□□□□ 0.29
NEK4-202ENST00000383721 IL17RAQ96F46 866 aa16.84■□□□□ 0.29
NEK4-202ENST00000383721 PPP1R9BQ96SB3 815 aa16.84■□□□□ 0.29
NEK4-202ENST00000383721 IL25Q9H293 177 aa16.84■□□□□ 0.29
NEK4-202ENST00000383721 CCDC173Q0VFZ6 552 aa16.84■□□□□ 0.29
NEK4-202ENST00000383721 POLA2Q14181 598 aa16.84■□□□□ 0.29
NEK4-202ENST00000383721 NUTM1Q86Y26 1132 aa16.84■□□□□ 0.29
NEK4-202ENST00000383721 N4BP2Q86UW6 1770 aaPredicted RBP16.84■□□□□ 0.29
NEK4-202ENST00000383721 EIF4A1P60842 406 aaKnown RBP16.84■□□□□ 0.29
NEK4-202ENST00000383721 LGR6Q9HBX8 967 aa16.84■□□□□ 0.29
NEK4-202ENST00000383721 OVOS2A0A0G2JMS6 1433 aa16.83■□□□□ 0.28
NEK4-202ENST00000383721 EIF2S2P20042 333 aaKnown RBP16.83■□□□□ 0.28
NEK4-202ENST00000383721 THRAP3Q9Y2W1 955 aaKnown RBP16.83■□□□□ 0.28
NEK4-202ENST00000383721 A0A0G2JS52 829 aa16.83■□□□□ 0.28
NEK4-202ENST00000383721 SURF6O75683 361 aaKnown RBP16.83■□□□□ 0.28
NEK4-202ENST00000383721 FOXD4L5Q5VV16 416 aaPredicted RBP16.83■□□□□ 0.28
NEK4-202ENST00000383721 BARGINQ6ZT62 677 aa16.83■□□□□ 0.28
NEK4-202ENST00000383721 FOXD4L4Q8WXT5 416 aaPredicted RBP16.83■□□□□ 0.28
NEK4-202ENST00000383721 RAB11FIP3O75154 756 aa16.82■□□□□ 0.28
NEK4-202ENST00000383721 BRD1O95696 1058 aa16.82■□□□□ 0.28
NEK4-202ENST00000383721 NBPF7P0C2Y1 421 aaPredicted RBP16.82■□□□□ 0.28
NEK4-202ENST00000383721 RHPN1Q8TCX5 695 aa16.82■□□□□ 0.28
NEK4-202ENST00000383721 RBM27Q9P2N5 1060 aaKnown RBP16.82■□□□□ 0.28
NEK4-202ENST00000383721 WNK3Q9BYP7 1800 aa16.81■□□□□ 0.28
NEK4-202ENST00000383721 CACNA1FO60840 1977 aa16.81■□□□□ 0.28
NEK4-202ENST00000383721 NOL8Q76FK4 1167 aaKnown RBP16.81■□□□□ 0.28
NEK4-202ENST00000383721 PI4K2BQ8TCG2 481 aa16.81■□□□□ 0.28
NEK4-202ENST00000383721 UPF3BQ9BZI7 483 aaKnown RBP16.81■□□□□ 0.28
NEK4-202ENST00000383721 CHPF2Q9P2E5 772 aa16.81■□□□□ 0.28
NEK4-202ENST00000383721 SRGAP3O43295 1099 aa16.81■□□□□ 0.28
NEK4-202ENST00000383721 KCNQ3O43525 872 aa16.81■□□□□ 0.28
NEK4-202ENST00000383721 BEND3Q5T5X7 828 aa16.81■□□□□ 0.28
NEK4-202ENST00000383721 INTS4Q96HW7 963 aaKnown RBP16.81■□□□□ 0.28
NEK4-202ENST00000383721 PARP4Q9UKK3 1724 aaKnown RBP16.8■□□□□ 0.28
NEK4-202ENST00000383721 PLEKHO1Q53GL0 409 aaPredicted RBP16.8■□□□□ 0.28
NEK4-202ENST00000383721 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
NEK4-202ENST00000383721 ZCRB1Q8TBF4 217 aaKnown RBP16.8■□□□□ 0.28
NEK4-202ENST00000383721 DDX54Q8TDD1 881 aaKnown RBP16.8■□□□□ 0.28
NEK4-202ENST00000383721 RBSNQ9H1K0 784 aa16.8■□□□□ 0.28
NEK4-202ENST00000383721 NSFL1CQ9UNZ2 370 aaKnown RBP16.8■□□□□ 0.28
NEK4-202ENST00000383721 EP400Q96L91 3159 aa16.8■□□□□ 0.28
NEK4-202ENST00000383721 CYP27B1O15528 508 aa16.8■□□□□ 0.28
NEK4-202ENST00000383721 MAP4K4O95819 1239 aaPredicted RBP16.8■□□□□ 0.28
NEK4-202ENST00000383721 HOXB7P09629 217 aa16.8■□□□□ 0.28
NEK4-202ENST00000383721 PRIM1P49642 420 aaKnown RBP16.8■□□□□ 0.28
NEK4-202ENST00000383721 PI4KAP2A4QPH2 592 aa16.79■□□□□ 0.28
NEK4-202ENST00000383721 HSPA4P34932 840 aa16.79■□□□□ 0.28
NEK4-202ENST00000383721 PI4KAP1Q8N8J0 262 aa16.79■□□□□ 0.28
NEK4-202ENST00000383721 DNAAF4Q8WXU2 420 aa16.79■□□□□ 0.28
NEK4-202ENST00000383721 TMEM63CQ9P1W3 806 aa16.79■□□□□ 0.28
NEK4-202ENST00000383721 EPB41L2O43491 1005 aaKnown RBP16.79■□□□□ 0.28
NEK4-202ENST00000383721 RBM6P78332 1123 aaKnown RBP16.79■□□□□ 0.28
NEK4-202ENST00000383721 KIF1BPQ96EK5 621 aa16.79■□□□□ 0.28
NEK4-202ENST00000383721 NAP1L5Q96NT1 182 aaPredicted RBP16.79■□□□□ 0.28
NEK4-202ENST00000383721 ANXA1P04083 346 aa16.78■□□□□ 0.28
NEK4-202ENST00000383721 DDB1Q16531 1140 aa16.78■□□□□ 0.28
NEK4-202ENST00000383721 AMOTQ4VCS5 1084 aa16.78■□□□□ 0.28
NEK4-202ENST00000383721 SEPT12Q8IYM1 358 aa16.78■□□□□ 0.28
NEK4-202ENST00000383721 ANP32BQ92688 251 aaKnown RBP16.78■□□□□ 0.28
NEK4-202ENST00000383721 PKD1L3Q7Z443 1732 aa16.78■□□□□ 0.28
NEK4-202ENST00000383721 SHANK3Q9BYB0 1731 aa16.78■□□□□ 0.28
NEK4-202ENST00000383721 SPG7Q9UQ90 795 aa16.78■□□□□ 0.28
NEK4-202ENST00000383721 THSD7AQ9UPZ6 1657 aa16.77■□□□□ 0.28
NEK4-202ENST00000383721 EXOC5O00471 708 aa16.77■□□□□ 0.28
NEK4-202ENST00000383721 ONECUT3O60422 494 aaPredicted RBP16.77■□□□□ 0.28
NEK4-202ENST00000383721 RXRBP28702 533 aa16.77■□□□□ 0.28
NEK4-202ENST00000383721 SGSM2O43147 1006 aa16.77■□□□□ 0.27
NEK4-202ENST00000383721 FAM182BQ5T319 152 aa16.77■□□□□ 0.27
NEK4-202ENST00000383721 ADCY9O60503 1353 aa16.76■□□□□ 0.27
NEK4-202ENST00000383721 CDCA7Q9BWT1 371 aaPredicted RBP16.76■□□□□ 0.27
NEK4-202ENST00000383721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.76■□□□□ 0.271e-6■■□□□ 13.7
NEK4-202ENST00000383721 TNS2Q63HR2 1409 aa16.76■□□□□ 0.27
NEK4-202ENST00000383721 RAD50Q92878 1312 aa16.76■□□□□ 0.27
NEK4-202ENST00000383721 PHKG2P15735 406 aa16.76■□□□□ 0.27
NEK4-202ENST00000383721 MPRIPQ6WCQ1 1025 aa16.76■□□□□ 0.27
NEK4-202ENST00000383721 BTBD11A6QL63 1104 aa16.75■□□□□ 0.27
NEK4-202ENST00000383721 TEFQ10587 303 aa16.75■□□□□ 0.27
NEK4-202ENST00000383721 AKAP4Q5JQC9 854 aa16.75■□□□□ 0.27
NEK4-202ENST00000383721 MARCH10Q8NA82 808 aaPredicted RBP16.75■□□□□ 0.27
NEK4-202ENST00000383721 PCDH11XQ9BZA7 1347 aa16.75■□□□□ 0.27
NEK4-202ENST00000383721 PCDH11YQ9BZA8 1340 aa16.75■□□□□ 0.27
NEK4-202ENST00000383721 SYCE3A1L190 88 aa16.74■□□□□ 0.27
NEK4-202ENST00000383721 MBD3O95983 291 aa16.74■□□□□ 0.27
NEK4-202ENST00000383721 C1orf141Q5JVX7 400 aa16.74■□□□□ 0.27
NEK4-202ENST00000383721 LRSAM1Q6UWE0 723 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms