RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 RSPH6AQ9H0K4 717 aa30.32■■■□□ 2.44
VLDLR-201ENST00000382096 TAOK3Q9H2K8 898 aa30.32■■■□□ 2.44
VLDLR-201ENST00000382096 KCNQ3O43525 872 aa30.31■■■□□ 2.44
VLDLR-201ENST00000382096 SRGNP10124 158 aa30.31■■■□□ 2.44
VLDLR-201ENST00000382096 ST5P78524 1137 aa30.31■■■□□ 2.44
VLDLR-201ENST00000382096 DZIP3Q86Y13 1208 aaKnown RBP30.31■■■□□ 2.44
VLDLR-201ENST00000382096 PRKAR2BP31323 418 aa30.3■■■□□ 2.44
VLDLR-201ENST00000382096 PRPF40BQ6NWY9 871 aaKnown RBP30.3■■■□□ 2.44
VLDLR-201ENST00000382096 SCN4AP35499 1836 aa30.3■■■□□ 2.44
VLDLR-201ENST00000382096 NPHP1O15259 732 aa30.29■■■□□ 2.44
VLDLR-201ENST00000382096 SOGA3Q5TF21 947 aa30.28■■■□□ 2.44
VLDLR-201ENST00000382096 MASTLQ96GX5 879 aa30.28■■■□□ 2.44
VLDLR-201ENST00000382096 NUDCQ9Y266 331 aa30.28■■■□□ 2.44
VLDLR-201ENST00000382096 USP16Q9Y5T5 823 aa30.27■■■□□ 2.44
VLDLR-201ENST00000382096 CLEC4GQ6UXB4 293 aa30.26■■■□□ 2.43
VLDLR-201ENST00000382096 LAMB4A4D0S4 1761 aa30.26■■■□□ 2.43
VLDLR-201ENST00000382096 HSPA1AP0DMV8 641 aaKnown RBP30.25■■■□□ 2.43
VLDLR-201ENST00000382096 HSPA1BP0DMV9 641 aaKnown RBP30.25■■■□□ 2.43
VLDLR-201ENST00000382096 TNS4Q8IZW8 715 aa30.24■■■□□ 2.43
VLDLR-201ENST00000382096 DDNO94850 711 aaPredicted RBP30.23■■■□□ 2.43
VLDLR-201ENST00000382096 PIP4K2AP48426 406 aaPredicted RBP30.23■■■□□ 2.43
VLDLR-201ENST00000382096 CHADLQ6NUI6 762 aa30.23■■■□□ 2.43
VLDLR-201ENST00000382096 PRAMEF22A3QJZ6 481 aa30.22■■■□□ 2.43
VLDLR-201ENST00000382096 SNRPA1P09661 255 aaKnown RBP30.22■■■□□ 2.43
VLDLR-201ENST00000382096 NBPF5PQ86XG9 351 aaPredicted RBP30.22■■■□□ 2.43
VLDLR-201ENST00000382096 C7orf43Q8WVR3 580 aa30.22■■■□□ 2.43
VLDLR-201ENST00000382096 ZNF652Q9Y2D9 606 aa30.22■■■□□ 2.43
VLDLR-201ENST00000382096 RGL2O15211 777 aa30.21■■■□□ 2.43
VLDLR-201ENST00000382096 U2AF1L5P0DN76 240 aaPredicted RBP30.21■■■□□ 2.43
VLDLR-201ENST00000382096 U2AF1Q01081 240 aaKnown RBP eCLIP30.21■■■□□ 2.43
VLDLR-201ENST00000382096 CREBZFQ9NS37 354 aa30.21■■■□□ 2.43
VLDLR-201ENST00000382096 KLRG2A4D1S0 409 aaPredicted RBP30.19■■■□□ 2.42
VLDLR-201ENST00000382096 POTEIP0CG38 1075 aa30.19■■■□□ 2.42
VLDLR-201ENST00000382096 POTEJP0CG39 1038 aa30.19■■■□□ 2.42
VLDLR-201ENST00000382096 DLG5Q8TDM6 1919 aa30.18■■■□□ 2.42
VLDLR-201ENST00000382096 NPR1P16066 1061 aa30.18■■■□□ 2.42
VLDLR-201ENST00000382096 CCDC93Q567U6 631 aa30.18■■■□□ 2.42
VLDLR-201ENST00000382096 MCM10Q7L590 875 aa30.18■■■□□ 2.42
VLDLR-201ENST00000382096 RTF1Q92541 710 aaKnown RBP30.18■■■□□ 2.42
VLDLR-201ENST00000382096 L3MBTL3Q96JM7 780 aaPredicted RBP30.18■■■□□ 2.42
VLDLR-201ENST00000382096 IQCA1LA6NCM1 817 aa30.17■■■□□ 2.42
VLDLR-201ENST00000382096 NUP98P52948 1817 aa30.16■■■□□ 2.42
VLDLR-201ENST00000382096 KDM3BQ7LBC6 1761 aa30.15■■■□□ 2.42
VLDLR-201ENST00000382096 ADAMTSL1Q8N6G6 1762 aa30.15■■■□□ 2.42
VLDLR-201ENST00000382096 NBPF26B4DH59 902 aa30.15■■■□□ 2.42
VLDLR-201ENST00000382096 NBPF10Q6P3W6 841 aaKnown RBP30.15■■■□□ 2.42
VLDLR-201ENST00000382096 NBPF15Q8N660 670 aa30.15■■■□□ 2.42
VLDLR-201ENST00000382096 CAPN15O75808 1086 aa30.14■■■□□ 2.42
VLDLR-201ENST00000382096 TPTE2Q6XPS3 522 aa30.14■■■□□ 2.42
VLDLR-201ENST00000382096 NIP7Q9Y221 180 aaKnown RBP eCLIP30.14■■■□□ 2.42
VLDLR-201ENST00000382096 HTATSF1O43719 755 aaKnown RBP30.13■■■□□ 2.41
VLDLR-201ENST00000382096 FKBP4Q02790 459 aaKnown RBP eCLIP30.13■■■□□ 2.41
VLDLR-201ENST00000382096 LDHDQ86WU2 507 aa30.13■■■□□ 2.41
VLDLR-201ENST00000382096 PASKQ96RG2 1323 aa30.13■■■□□ 2.41
VLDLR-201ENST00000382096 TAF1DQ9H5J8 278 aaPredicted RBP30.12■■■□□ 2.41
VLDLR-201ENST00000382096 DCTN1Q14203 1278 aa30.11■■■□□ 2.41
VLDLR-201ENST00000382096 MKRN1Q9UHC7 482 aaKnown RBP30.11■■■□□ 2.41
VLDLR-201ENST00000382096 CNTNAP1P78357 1384 aa30.09■■■□□ 2.41
VLDLR-201ENST00000382096 RTKN2Q8IZC4 609 aa30.09■■■□□ 2.41
VLDLR-201ENST00000382096 ZNF541Q9H0D2 1346 aa30.09■■■□□ 2.41
VLDLR-201ENST00000382096 ZNF277Q9NRM2 450 aaPredicted RBP30.09■■■□□ 2.41
VLDLR-201ENST00000382096 SNED1Q8TER0 1413 aa30.07■■■□□ 2.4
VLDLR-201ENST00000382096 TAF7Q15545 349 aaPredicted RBP30.07■■■□□ 2.4
VLDLR-201ENST00000382096 OLFM4Q6UX06 510 aa30.07■■■□□ 2.4
VLDLR-201ENST00000382096 HLFQ16534 295 aa30.06■■■□□ 2.4
VLDLR-201ENST00000382096 FAM177BA6PVY3 158 aa30.05■■■□□ 2.4
VLDLR-201ENST00000382096 ALDH1B1P30837 517 aa30.05■■■□□ 2.4
VLDLR-201ENST00000382096 ITGBL1O95965 494 aaPredicted RBP30.04■■■□□ 2.4
VLDLR-201ENST00000382096 HACL1Q9UJ83 578 aa30.04■■■□□ 2.4
VLDLR-201ENST00000382096 CRY2Q49AN0 593 aa30.03■■■□□ 2.4
VLDLR-201ENST00000382096 FZD9O00144 591 aa30.02■■■□□ 2.4
VLDLR-201ENST00000382096 IARSP41252 1262 aaKnown RBP30.02■■■□□ 2.4
VLDLR-201ENST00000382096 PLEKHF1Q96S99 279 aa30.02■■■□□ 2.4
VLDLR-201ENST00000382096 RIC1Q4ADV7 1423 aa30.02■■■□□ 2.4
VLDLR-201ENST00000382096 ABCC12Q96J65 1359 aa30.02■■■□□ 2.4
VLDLR-201ENST00000382096 GTF2E1P29083 439 aaPredicted RBP30.01■■■□□ 2.39
VLDLR-201ENST00000382096 EAPPQ56P03 285 aaPredicted RBP30.01■■■□□ 2.39
VLDLR-201ENST00000382096 MIS18AQ9NYP9 233 aa30.01■■■□□ 2.39
VLDLR-201ENST00000382096 TMEM88BA6NKF7 163 aa30■■■□□ 2.39
VLDLR-201ENST00000382096 ERVV-1B6SEH8 477 aa30■■■□□ 2.39
VLDLR-201ENST00000382096 EPHX2P34913 555 aa30■■■□□ 2.39
VLDLR-201ENST00000382096 SYNE4Q8N205 404 aa30■■■□□ 2.39
VLDLR-201ENST00000382096 PSMD1Q99460 953 aa30■■■□□ 2.39
VLDLR-201ENST00000382096 NYXQ9GZU5 481 aa30■■■□□ 2.39
VLDLR-201ENST00000382096 PNMA8AQ86V59 439 aaPredicted RBP29.99■■■□□ 2.39
VLDLR-201ENST00000382096 IBTKQ9P2D0 1353 aaPredicted RBP29.99■■■□□ 2.39
VLDLR-201ENST00000382096 RNF123Q5XPI4 1314 aa29.98■■■□□ 2.39
VLDLR-201ENST00000382096 COL4A5P29400 1685 aa29.98■■■□□ 2.39
VLDLR-201ENST00000382096 FOXN1O15353 648 aa29.98■■■□□ 2.39
VLDLR-201ENST00000382096 GPC2Q8N158 579 aa29.98■■■□□ 2.39
VLDLR-201ENST00000382096 PNISRQ8TF01 805 aaKnown RBP29.98■■■□□ 2.39
VLDLR-201ENST00000382096 MAP3K15Q6ZN16 1313 aa29.97■■■□□ 2.39
VLDLR-201ENST00000382096 NEFMP07197 916 aa29.97■■■□□ 2.39
VLDLR-201ENST00000382096 LTBP1Q14766 1721 aa29.96■■■□□ 2.39
VLDLR-201ENST00000382096 NUTM1Q86Y26 1132 aa29.96■■■□□ 2.39
VLDLR-201ENST00000382096 VEGFBP49765 207 aa29.95■■■□□ 2.39
VLDLR-201ENST00000382096 CC2D2BQ6DHV5 1058 aa29.95■■■□□ 2.39
VLDLR-201ENST00000382096 CLEC11AQ9Y240 323 aa29.95■■■□□ 2.39
VLDLR-201ENST00000382096 NFE2L2Q16236 605 aa29.94■■■□□ 2.38
VLDLR-201ENST00000382096 JDP2Q8WYK2 163 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms