RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 YEATS2Q9ULM3 1422 aa16.3■□□□□ 0.2
SNPH-201ENST00000381867 PLEKHH1Q9ULM0 1364 aa16.3■□□□□ 0.2
SNPH-201ENST00000381867 PIK3R4Q99570 1358 aa16.3■□□□□ 0.2
SNPH-201ENST00000381867 SOS1Q07889 1333 aaPredicted RBP16.29■□□□□ 0.2
SNPH-201ENST00000381867 MCM3P25205 808 aa16.29■□□□□ 0.2
SNPH-201ENST00000381867 EIF5P55010 431 aaKnown RBP16.29■□□□□ 0.2
SNPH-201ENST00000381867 CASTP20810 708 aaKnown RBP16.29■□□□□ 0.2
SNPH-201ENST00000381867 CASQ1P31415 396 aa16.29■□□□□ 0.2
SNPH-201ENST00000381867 MPRIPQ6WCQ1 1025 aa16.29■□□□□ 0.2
SNPH-201ENST00000381867 STK11IPQ8N1F8 1099 aa16.29■□□□□ 0.2
SNPH-201ENST00000381867 WASF1Q92558 559 aa16.28■□□□□ 0.2
SNPH-201ENST00000381867 SCAND2PQ9GZW5 306 aaPredicted RBP16.28■□□□□ 0.2
SNPH-201ENST00000381867 AKAP4Q5JQC9 854 aa16.28■□□□□ 0.2
SNPH-201ENST00000381867 DNAAF4Q8WXU2 420 aa16.28■□□□□ 0.2
SNPH-201ENST00000381867 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
SNPH-201ENST00000381867 KIF5CO60282 957 aa16.28■□□□□ 0.2
SNPH-201ENST00000381867 URI1O94763 535 aaPredicted RBP16.28■□□□□ 0.2
SNPH-201ENST00000381867 DHX37Q8IY37 1157 aaKnown RBP16.28■□□□□ 0.2
SNPH-201ENST00000381867 NUP133Q8WUM0 1156 aa16.28■□□□□ 0.2
SNPH-201ENST00000381867 KIF1BPQ96EK5 621 aa16.28■□□□□ 0.2
SNPH-201ENST00000381867 ZHX3Q9H4I2 956 aa16.28■□□□□ 0.2
SNPH-201ENST00000381867 NLRP1Q9C000 1473 aa16.28■□□□□ 0.2
SNPH-201ENST00000381867 JAKMIP3Q5VZ66 844 aa16.27■□□□□ 0.2
SNPH-201ENST00000381867 CLIP2Q9UDT6 1046 aa16.27■□□□□ 0.2
SNPH-201ENST00000381867 EFCAB6Q5THR3 1501 aa16.27■□□□□ 0.2
SNPH-201ENST00000381867 SHROOM2Q13796 1616 aa16.27■□□□□ 0.2
SNPH-201ENST00000381867 NEMFO60524 1076 aa16.27■□□□□ 0.2
SNPH-201ENST00000381867 TNNT1P13805 278 aa16.27■□□□□ 0.2
SNPH-201ENST00000381867 TMEM57Q8N5G2 664 aa16.27■□□□□ 0.2
SNPH-201ENST00000381867 ZCRB1Q8TBF4 217 aaKnown RBP16.27■□□□□ 0.2
SNPH-201ENST00000381867 SSH1Q8WYL5 1049 aa16.27■□□□□ 0.2
SNPH-201ENST00000381867 A0A1W2PP64 1363 aa16.27■□□□□ 0.2
SNPH-201ENST00000381867 CDCA7Q9BWT1 371 aaPredicted RBP16.27■□□□□ 0.19
SNPH-201ENST00000381867 FAM107BQ9H098 131 aa16.27■□□□□ 0.19
SNPH-201ENST00000381867 SNRPA1P09661 255 aaKnown RBP16.27■□□□□ 0.19
SNPH-201ENST00000381867 TNPO1Q92973 898 aaKnown RBP16.27■□□□□ 0.19
SNPH-201ENST00000381867 SOGA3Q5TF21 947 aa16.26■□□□□ 0.19
SNPH-201ENST00000381867 ZSCAN29Q8IWY8 852 aaPredicted RBP16.26■□□□□ 0.19
SNPH-201ENST00000381867 IMMTQ16891 758 aaKnown RBP16.26■□□□□ 0.19
SNPH-201ENST00000381867 ZNF397Q8NF99 534 aaPredicted RBP16.26■□□□□ 0.19
SNPH-201ENST00000381867 ARHGAP45Q92619 1136 aa16.26■□□□□ 0.19
SNPH-201ENST00000381867 GBP2P32456 591 aaPredicted RBP16.26■□□□□ 0.19
SNPH-201ENST00000381867 DYDC1Q8WWB3 177 aa16.26■□□□□ 0.19
SNPH-201ENST00000381867 CEP131Q9UPN4 1083 aa16.26■□□□□ 0.19
SNPH-201ENST00000381867 CCDC83Q8IWF9 413 aa16.26■□□□□ 0.19
SNPH-201ENST00000381867 TBC1D2Q9BYX2 928 aa16.26■□□□□ 0.19
SNPH-201ENST00000381867 BMP2KQ9NSY1 1161 aaPredicted RBP16.26■□□□□ 0.19
SNPH-201ENST00000381867 PTCD1O75127 700 aaKnown RBP16.26■□□□□ 0.19
SNPH-201ENST00000381867 SSFA2P28290 1259 aa16.26■□□□□ 0.19
SNPH-201ENST00000381867 THUMPD2Q9BTF0 503 aaKnown RBP16.26■□□□□ 0.19
SNPH-201ENST00000381867 ARHGEF10O15013 1369 aa16.25■□□□□ 0.19
SNPH-201ENST00000381867 SBNO2Q9Y2G9 1366 aa16.25■□□□□ 0.19
SNPH-201ENST00000381867 MYOM2P54296 1465 aa16.25■□□□□ 0.19
SNPH-201ENST00000381867 FERMT3Q86UX7 667 aa16.25■□□□□ 0.19
SNPH-201ENST00000381867 IL1RAPL2Q9NP60 686 aa16.25■□□□□ 0.19
SNPH-201ENST00000381867 USP25Q9UHP3 1055 aa16.25■□□□□ 0.19
SNPH-201ENST00000381867 DYNC1I1O14576 645 aa16.25■□□□□ 0.19
SNPH-201ENST00000381867 KIF4BQ2VIQ3 1234 aa16.25■□□□□ 0.19
SNPH-201ENST00000381867 DDX11Q96FC9 970 aa16.25■□□□□ 0.19
SNPH-201ENST00000381867 PLEKHG1Q9ULL1 1385 aa16.25■□□□□ 0.19
SNPH-201ENST00000381867 LMTK3Q96Q04 1460 aa16.25■□□□□ 0.19
SNPH-201ENST00000381867 SH2B1Q9NRF2 756 aaPredicted RBP16.24■□□□□ 0.19
SNPH-201ENST00000381867 TOP1P11387 765 aaKnown RBP16.24■□□□□ 0.19
SNPH-201ENST00000381867 PAF1Q8N7H5 531 aa16.24■□□□□ 0.19
SNPH-201ENST00000381867 SEPT11Q9NVA2 429 aaKnown RBP16.24■□□□□ 0.19
SNPH-201ENST00000381867 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
SNPH-201ENST00000381867 CTAGE5O15320 804 aa16.24■□□□□ 0.19
SNPH-201ENST00000381867 SPA17Q15506 151 aa16.24■□□□□ 0.19
SNPH-201ENST00000381867 PPP4R3BQ5MIZ7 849 aa16.24■□□□□ 0.19
SNPH-201ENST00000381867 MICALCLQ6ZW33 695 aa16.23■□□□□ 0.19
SNPH-201ENST00000381867 POLR3GO15318 223 aaPredicted RBP16.23■□□□□ 0.19
SNPH-201ENST00000381867 IP6K1Q92551 441 aa16.23■□□□□ 0.19
SNPH-201ENST00000381867 POTEB2H3BUK9 544 aa16.23■□□□□ 0.19
SNPH-201ENST00000381867 FKBP4Q02790 459 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNPH-201ENST00000381867 FLIIQ13045 1269 aa16.23■□□□□ 0.19
SNPH-201ENST00000381867 EIF4A2Q14240 407 aaKnown RBP16.23■□□□□ 0.19
SNPH-201ENST00000381867 UBAC1Q9BSL1 405 aa16.23■□□□□ 0.19
SNPH-201ENST00000381867 MAP2K1Q02750 393 aaPredicted RBP16.23■□□□□ 0.19
SNPH-201ENST00000381867 C16orf45Q96MC5 204 aaPredicted RBP16.23■□□□□ 0.19
SNPH-201ENST00000381867 MX1P20591 662 aa16.22■□□□□ 0.19
SNPH-201ENST00000381867 MYD88Q99836 296 aa16.22■□□□□ 0.19
SNPH-201ENST00000381867 MIS18AQ9NYP9 233 aa16.22■□□□□ 0.19
SNPH-201ENST00000381867 SBNO1A3KN83 1393 aa16.22■□□□□ 0.19
SNPH-201ENST00000381867 GSDMDP57764 484 aa16.22■□□□□ 0.19
SNPH-201ENST00000381867 IL2RBP14784 551 aa16.22■□□□□ 0.19
SNPH-201ENST00000381867 HSPA2P54652 639 aa16.22■□□□□ 0.19
SNPH-201ENST00000381867 PRIMPOLQ96LW4 560 aa16.22■□□□□ 0.19
SNPH-201ENST00000381867 GLRX3O76003 335 aaKnown RBP16.22■□□□□ 0.19
SNPH-201ENST00000381867 IFIT1P09914 478 aaKnown RBP16.22■□□□□ 0.19
SNPH-201ENST00000381867 BABAM1Q9NWV8 329 aa16.22■□□□□ 0.19
SNPH-201ENST00000381867 GCP02774 474 aa16.21■□□□□ 0.19
SNPH-201ENST00000381867 GTF2F1P35269 517 aaKnown RBP eCLIP16.21■□□□□ 0.19
SNPH-201ENST00000381867 MBIPQ9NS73 344 aa16.21■□□□□ 0.19
SNPH-201ENST00000381867 RAI14Q9P0K7 980 aa16.21■□□□□ 0.19
SNPH-201ENST00000381867 CHRNA2Q15822 529 aa16.21■□□□□ 0.19
SNPH-201ENST00000381867 CLASP1Q7Z460 1538 aa16.21■□□□□ 0.19
SNPH-201ENST00000381867 UBE2Q2Q8WVN8 375 aa16.21■□□□□ 0.19
SNPH-201ENST00000381867 CCDC85AQ96PX6 553 aaPredicted RBP16.21■□□□□ 0.19
SNPH-201ENST00000381867 DDX19AQ9NUU7 478 aaKnown RBP16.21■□□□□ 0.19
SNPH-201ENST00000381867 NUTM1Q86Y26 1132 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms