RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TWISTNBQ3B726 338 aaPredicted RBP20.88■□□□□ 0.93
SNRPB-201ENST00000381342 DZIP3Q86Y13 1208 aaKnown RBP20.88■□□□□ 0.93
SNRPB-201ENST00000381342 WWC3Q9ULE0 1092 aa20.88■□□□□ 0.93
SNRPB-201ENST00000381342 CHD4Q14839 1912 aa20.88■□□□□ 0.93
SNRPB-201ENST00000381342 SLFN5Q08AF3 891 aa20.87■□□□□ 0.93
SNRPB-201ENST00000381342 CAMTA2O94983 1202 aa20.86■□□□□ 0.93
SNRPB-201ENST00000381342 TM4SF1P30408 202 aa20.86■□□□□ 0.93
SNRPB-201ENST00000381342 LRP10Q7Z4F1 713 aa20.86■□□□□ 0.93
SNRPB-201ENST00000381342 BCL2L12Q9HB09 334 aa20.86■□□□□ 0.93
SNRPB-201ENST00000381342 DDX21Q9NR30 783 aaKnown RBP eCLIP20.86■□□□□ 0.93
SNRPB-201ENST00000381342 AFDNP55196 1824 aaKnown RBP20.85■□□□□ 0.93
SNRPB-201ENST00000381342 ANKRD36CQ5JPF3 1778 aa20.85■□□□□ 0.93
SNRPB-201ENST00000381342 ARFGEF2Q9Y6D5 1785 aa20.85■□□□□ 0.93
SNRPB-201ENST00000381342 A0A0G2JLW4 131 aa20.85■□□□□ 0.93
SNRPB-201ENST00000381342 POLRMTO00411 1230 aaKnown RBP20.84■□□□□ 0.93
SNRPB-201ENST00000381342 DDR1Q08345 913 aa20.84■□□□□ 0.93
SNRPB-201ENST00000381342 BICDL1Q6ZP65 573 aa20.84■□□□□ 0.93
SNRPB-201ENST00000381342 TTLL7Q6ZT98 887 aa20.84■□□□□ 0.93
SNRPB-201ENST00000381342 DBF4Q9UBU7 674 aaPredicted RBP20.84■□□□□ 0.93
SNRPB-201ENST00000381342 BCS1LQ9Y276 419 aa20.84■□□□□ 0.93
SNRPB-201ENST00000381342 C10orf71Q711Q0 1435 aa20.84■□□□□ 0.93
SNRPB-201ENST00000381342 ZBED9Q6R2W3 1325 aa20.83■□□□□ 0.93
SNRPB-201ENST00000381342 CACNA1FO60840 1977 aa20.83■□□□□ 0.93
SNRPB-201ENST00000381342 TCERG1O14776 1098 aaKnown RBP20.83■□□□□ 0.93
SNRPB-201ENST00000381342 DPEP1P16444 411 aa20.83■□□□□ 0.93
SNRPB-201ENST00000381342 NFIXQ14938 502 aa20.83■□□□□ 0.93
SNRPB-201ENST00000381342 NRXN2Q9P2S2 1712 aa20.82■□□□□ 0.92
SNRPB-201ENST00000381342 SERPINB2P05120 415 aa20.82■□□□□ 0.92
SNRPB-201ENST00000381342 CCDC30Q5VVM6 783 aa20.82■□□□□ 0.92
SNRPB-201ENST00000381342 KIF6Q6ZMV9 814 aa20.82■□□□□ 0.92
SNRPB-201ENST00000381342 ZNF784Q8NCA9 323 aaPredicted RBP20.82■□□□□ 0.92
SNRPB-201ENST00000381342 XAGE3Q8WTP9 111 aa20.82■□□□□ 0.92
SNRPB-201ENST00000381342 MAP3K15Q6ZN16 1313 aa20.81■□□□□ 0.92
SNRPB-201ENST00000381342 NPHP1O15259 732 aa20.81■□□□□ 0.92
SNRPB-201ENST00000381342 VAMP4O75379 141 aa20.81■□□□□ 0.92
SNRPB-201ENST00000381342 AIMP1Q12904 312 aaKnown RBP20.81■□□□□ 0.92
SNRPB-201ENST00000381342 TRMT2AQ8IZ69 625 aaKnown RBP20.81■□□□□ 0.92
SNRPB-201ENST00000381342 ZBTB3Q9H5J0 574 aa20.81■□□□□ 0.92
SNRPB-201ENST00000381342 PIM2Q9P1W9 311 aa20.81■□□□□ 0.92
SNRPB-201ENST00000381342 KIF13BQ9NQT8 1826 aa20.81■□□□□ 0.92
SNRPB-201ENST00000381342 TBC1D9BQ66K14 1250 aa20.8■□□□□ 0.92
SNRPB-201ENST00000381342 COPS6Q7L5N1 327 aa20.8■□□□□ 0.92
SNRPB-201ENST00000381342 ZNF652Q9Y2D9 606 aa20.8■□□□□ 0.92
SNRPB-201ENST00000381342 PXDNLA1KZ92 1463 aa20.8■□□□□ 0.92
SNRPB-201ENST00000381342 HLFQ16534 295 aa20.79■□□□□ 0.92
SNRPB-201ENST00000381342 SETDB2Q96T68 719 aa20.79■□□□□ 0.92
SNRPB-201ENST00000381342 STK31Q9BXU1 1019 aa20.79■□□□□ 0.92
SNRPB-201ENST00000381342 HYPKQ9NX55 129 aa20.79■□□□□ 0.92
SNRPB-201ENST00000381342 CHMP4AQ9BY43 222 aa20.78■□□□□ 0.92
SNRPB-201ENST00000381342 PHAXQ9H814 394 aaKnown RBP20.78■□□□□ 0.92
SNRPB-201ENST00000381342 DALRD3Q5D0E6 543 aaKnown RBP20.77■□□□□ 0.92
SNRPB-201ENST00000381342 ATP10DQ9P241 1426 aa20.77■□□□□ 0.91
SNRPB-201ENST00000381342 KIAA1551Q9HCM1 1747 aa20.76■□□□□ 0.91
SNRPB-201ENST00000381342 CARMIL3Q8ND23 1372 aa20.76■□□□□ 0.91
SNRPB-201ENST00000381342 ERVV-1B6SEH8 477 aa20.76■□□□□ 0.91
SNRPB-201ENST00000381342 CLEC4GQ6UXB4 293 aa20.76■□□□□ 0.91
SNRPB-201ENST00000381342 ARHGAP27Q6ZUM4 889 aa20.76■□□□□ 0.91
SNRPB-201ENST00000381342 N4BP2Q86UW6 1770 aaPredicted RBP20.75■□□□□ 0.91
SNRPB-201ENST00000381342 PDZRN3Q9UPQ7 1066 aa20.75■□□□□ 0.91
SNRPB-201ENST00000381342 ANKRD31Q8N7Z5 1873 aa20.75■□□□□ 0.91
SNRPB-201ENST00000381342 H0YIN7 160 aa20.74■□□□□ 0.91
SNRPB-201ENST00000381342 RGL2O15211 777 aa20.74■□□□□ 0.91
SNRPB-201ENST00000381342 CHRNA5P30532 468 aa20.74■□□□□ 0.91
SNRPB-201ENST00000381342 GIGYF2Q6Y7W6 1299 aaKnown RBP20.74■□□□□ 0.91
SNRPB-201ENST00000381342 G2E3Q7L622 706 aa20.74■□□□□ 0.91
SNRPB-201ENST00000381342 SLC4A2P04920 1241 aa20.73■□□□□ 0.91
SNRPB-201ENST00000381342 KCNA3P22001 575 aa20.73■□□□□ 0.91
SNRPB-201ENST00000381342 PDE6BP35913 854 aa20.73■□□□□ 0.91
SNRPB-201ENST00000381342 ST5P78524 1137 aa20.73■□□□□ 0.91
SNRPB-201ENST00000381342 NIP7Q9Y221 180 aaKnown RBP eCLIP20.73■□□□□ 0.911e-323■■■■■ 29.1
SNRPB-201ENST00000381342 GPTP24298 496 aa20.72■□□□□ 0.91
SNRPB-201ENST00000381342 C2CD5Q86YS7 1000 aa20.72■□□□□ 0.91
SNRPB-201ENST00000381342 CNBD1Q8NA66 436 aa20.72■□□□□ 0.91
SNRPB-201ENST00000381342 PLBD2Q8NHP8 589 aa20.72■□□□□ 0.91
SNRPB-201ENST00000381342 ANKRD13DQ6ZTN6 518 aa20.71■□□□□ 0.91
SNRPB-201ENST00000381342 YTHDC1Q96MU7 727 aaKnown RBP20.71■□□□□ 0.91
SNRPB-201ENST00000381342 BRIP1Q9BX63 1249 aa20.71■□□□□ 0.91
SNRPB-201ENST00000381342 UBN2Q6ZU65 1347 aa20.71■□□□□ 0.91
SNRPB-201ENST00000381342 COL11A2P13942 1736 aaPredicted RBP20.7■□□□□ 0.9
SNRPB-201ENST00000381342 FLIIQ13045 1269 aa20.7■□□□□ 0.9
SNRPB-201ENST00000381342 NBPF5PQ86XG9 351 aaPredicted RBP20.7■□□□□ 0.9
SNRPB-201ENST00000381342 TNRC6CQ9HCJ0 1690 aaKnown RBP20.7■□□□□ 0.9
SNRPB-201ENST00000381342 ADCY9O60503 1353 aa20.7■□□□□ 0.9
SNRPB-201ENST00000381342 FAM177BA6PVY3 158 aa20.69■□□□□ 0.9
SNRPB-201ENST00000381342 PRR5LQ6MZQ0 368 aa20.69■□□□□ 0.9
SNRPB-201ENST00000381342 RIC3Q7Z5B4 369 aa20.69■□□□□ 0.9
SNRPB-201ENST00000381342 TTLL6Q8N841 843 aa20.69■□□□□ 0.9
SNRPB-201ENST00000381342 BCL2L13Q9BXK5 485 aa20.69■□□□□ 0.9
SNRPB-201ENST00000381342 DLEC1Q9Y238 1755 aa20.69■□□□□ 0.9
SNRPB-201ENST00000381342 DDX58O95786 925 aaKnown RBP20.68■□□□□ 0.9
SNRPB-201ENST00000381342 GTF2E1P29083 439 aaPredicted RBP20.68■□□□□ 0.9
SNRPB-201ENST00000381342 TPTE2Q6XPS3 522 aa20.68■□□□□ 0.9
SNRPB-201ENST00000381342 ZNF34Q8IZ26 560 aa20.68■□□□□ 0.9
SNRPB-201ENST00000381342 SSH1Q8WYL5 1049 aa20.68■□□□□ 0.9
SNRPB-201ENST00000381342 ZNF622Q969S3 477 aaKnown RBP eCLIP20.68■□□□□ 0.9
SNRPB-201ENST00000381342 BRCA1P38398 1863 aaKnown RBP20.67■□□□□ 0.9
SNRPB-201ENST00000381342 CT47B1P0C2W7 299 aaPredicted RBP20.67■□□□□ 0.9
SNRPB-201ENST00000381342 HSP90AB3PQ58FF7 597 aa20.67■□□□□ 0.9
SNRPB-201ENST00000381342 CCDC24Q8N4L8 307 aa20.67■□□□□ 0.9
SNRPB-201ENST00000381342 GPBP1L1Q9HC44 474 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms