RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 PTH1RQ03431 593 aa14.68□□□□□ -0.06
RFC3-201ENST00000380071 RUFY3Q7L099 469 aa14.68□□□□□ -0.06
RFC3-201ENST00000380071 DTNBO60941 627 aa14.67□□□□□ -0.06
RFC3-201ENST00000380071 TRHP20396 242 aaPredicted RBP14.67□□□□□ -0.06
RFC3-201ENST00000380071 KAZALD1Q96I82 304 aa14.67□□□□□ -0.06
RFC3-201ENST00000380071 MBD3O95983 291 aa14.67□□□□□ -0.06
RFC3-201ENST00000380071 USP48Q86UV5 1035 aa14.67□□□□□ -0.06
RFC3-201ENST00000380071 SUCLG2Q96I99 432 aa14.67□□□□□ -0.06
RFC3-201ENST00000380071 ECHDC1Q9NTX5 307 aa14.67□□□□□ -0.06
RFC3-201ENST00000380071 RPAP1Q9BWH6 1393 aaPredicted RBP14.67□□□□□ -0.06
RFC3-201ENST00000380071 IFIT2P09913 472 aaKnown RBP14.66□□□□□ -0.06
RFC3-201ENST00000380071 DIAPH3Q9NSV4 1193 aa14.66□□□□□ -0.06
RFC3-201ENST00000380071 PHRF1Q9P1Y6 1649 aaKnown RBP14.66□□□□□ -0.06
RFC3-201ENST00000380071 CASTP20810 708 aaKnown RBP14.66□□□□□ -0.06
RFC3-201ENST00000380071 SLC39A6Q13433 755 aa14.66□□□□□ -0.06
RFC3-201ENST00000380071 PDIA6Q15084 440 aa14.66□□□□□ -0.06
RFC3-201ENST00000380071 ADCK5Q3MIX3 580 aa14.66□□□□□ -0.06
RFC3-201ENST00000380071 ZSCAN30Q86W11 494 aa14.66□□□□□ -0.06
RFC3-201ENST00000380071 UBE2Q2Q8WVN8 375 aa14.66□□□□□ -0.06
RFC3-201ENST00000380071 WDR33Q9C0J8 1336 aaKnown RBP14.66□□□□□ -0.06
RFC3-201ENST00000380071 NCAPD2Q15021 1401 aa14.65□□□□□ -0.06
RFC3-201ENST00000380071 SASH1O94885 1247 aa14.65□□□□□ -0.06
RFC3-201ENST00000380071 AACSQ86V21 672 aa14.65□□□□□ -0.06
RFC3-201ENST00000380071 BICC1Q9H694 974 aaKnown RBP14.65□□□□□ -0.06
RFC3-201ENST00000380071 HYPKQ9NX55 129 aa14.65□□□□□ -0.06
RFC3-201ENST00000380071 LIMCH1Q9UPQ0 1083 aa14.65□□□□□ -0.06
RFC3-201ENST00000380071 GRM8O00222 908 aa14.65□□□□□ -0.06
RFC3-201ENST00000380071 LARGE1O95461 756 aa14.65□□□□□ -0.06
RFC3-201ENST00000380071 PRPF40BQ6NWY9 871 aaKnown RBP14.65□□□□□ -0.06
RFC3-201ENST00000380071 KRT28Q7Z3Y7 464 aa14.65□□□□□ -0.06
RFC3-201ENST00000380071 RNF214Q8ND24 703 aa14.65□□□□□ -0.06
RFC3-201ENST00000380071 DDX54Q8TDD1 881 aaKnown RBP14.65□□□□□ -0.06
RFC3-201ENST00000380071 PDLIM2Q96JY6 352 aa14.65□□□□□ -0.06
RFC3-201ENST00000380071 TCHHQ07283 1943 aa14.65□□□□□ -0.06
RFC3-201ENST00000380071 ZC3H6P61129 1189 aaKnown RBP14.64□□□□□ -0.07
RFC3-201ENST00000380071 LINS1Q8NG48 757 aa14.64□□□□□ -0.07
RFC3-201ENST00000380071 EAF2Q96CJ1 260 aaPredicted RBP14.64□□□□□ -0.07
RFC3-201ENST00000380071 CCDC8Q9H0W5 538 aaPredicted RBP14.64□□□□□ -0.07
RFC3-201ENST00000380071 CRYBG1Q9Y4K1 1723 aa14.64□□□□□ -0.07
RFC3-201ENST00000380071 DDX21Q9NR30 783 aaKnown RBP eCLIP14.64□□□□□ -0.07
RFC3-201ENST00000380071 SLIT3O75094 1523 aa14.63□□□□□ -0.07
RFC3-201ENST00000380071 IGKV5-2P06315 115 aa14.63□□□□□ -0.07
RFC3-201ENST00000380071 TPRNQ4KMQ1 711 aa14.63□□□□□ -0.07
RFC3-201ENST00000380071 ERC1Q8IUD2 1116 aa14.63□□□□□ -0.07
RFC3-201ENST00000380071 KLHDC4Q8TBB5 520 aa14.63□□□□□ -0.07
RFC3-201ENST00000380071 RUFY2Q8WXA3 655 aa14.63□□□□□ -0.07
RFC3-201ENST00000380071 MYL6BP14649 208 aa14.63□□□□□ -0.07
RFC3-201ENST00000380071 SYT1P21579 422 aa14.63□□□□□ -0.07
RFC3-201ENST00000380071 EVI5LQ96CN4 794 aa14.63□□□□□ -0.07
RFC3-201ENST00000380071 FAM227BQ96M60 508 aa14.63□□□□□ -0.07
RFC3-201ENST00000380071 JAKMIP1Q96N16 626 aaKnown RBP14.63□□□□□ -0.07
RFC3-201ENST00000380071 SIL1Q9H173 461 aa14.63□□□□□ -0.07
RFC3-201ENST00000380071 TLR7Q9NYK1 1049 aaKnown RBP14.63□□□□□ -0.07
RFC3-201ENST00000380071 CNPY2Q9Y2B0 182 aa14.63□□□□□ -0.07
RFC3-201ENST00000380071 ZSCAN22P10073 491 aaPredicted RBP14.62□□□□□ -0.07
RFC3-201ENST00000380071 G3BP1Q13283 466 aaKnown RBP eCLIP14.62□□□□□ -0.07
RFC3-201ENST00000380071 RIC3Q7Z5B4 369 aa14.62□□□□□ -0.07
RFC3-201ENST00000380071 GPATCH3Q96I76 525 aa14.62□□□□□ -0.07
RFC3-201ENST00000380071 STX6O43752 255 aa14.62□□□□□ -0.07
RFC3-201ENST00000380071 ZNF790Q6PG37 636 aa14.62□□□□□ -0.07
RFC3-201ENST00000380071 CCDC83Q8IWF9 413 aa14.62□□□□□ -0.07
RFC3-201ENST00000380071 PDRG1Q9NUG6 133 aa14.62□□□□□ -0.07
RFC3-201ENST00000380071 UTYO14607 1347 aa14.62□□□□□ -0.07
RFC3-201ENST00000380071 OVOS2A0A0G2JMS6 1433 aa14.62□□□□□ -0.07
RFC3-201ENST00000380071 RGPD5Q99666 1765 aa14.61□□□□□ -0.07
RFC3-201ENST00000380071 DDX58O95786 925 aaKnown RBP14.61□□□□□ -0.07
RFC3-201ENST00000380071 MSNP26038 577 aaKnown RBP14.61□□□□□ -0.07
RFC3-201ENST00000380071 COL9A3Q14050 684 aaPredicted RBP14.61□□□□□ -0.07
RFC3-201ENST00000380071 NECTIN1Q15223 517 aa14.61□□□□□ -0.07
RFC3-201ENST00000380071 NFATC2IPQ8NCF5 419 aa14.61□□□□□ -0.07
RFC3-201ENST00000380071 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.61□□□□□ -0.07
RFC3-201ENST00000380071 SMC3Q9UQE7 1217 aa14.61□□□□□ -0.07
RFC3-201ENST00000380071 HDAC5Q9UQL6 1122 aa14.61□□□□□ -0.07
RFC3-201ENST00000380071 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.61□□□□□ -0.07
RFC3-201ENST00000380071 ERBB3P21860 1342 aa14.61□□□□□ -0.07
RFC3-201ENST00000380071 BOLA2Q9H3K6 86 aa14.61□□□□□ -0.07
RFC3-201ENST00000380071 ZSWIM6Q9HCJ5 1215 aa14.61□□□□□ -0.07
RFC3-201ENST00000380071 NMIQ13287 307 aaPredicted RBP14.6□□□□□ -0.07
RFC3-201ENST00000380071 EPHA10Q5JZY3 1008 aa14.6□□□□□ -0.07
RFC3-201ENST00000380071 JARID2Q92833 1246 aaPredicted RBP14.6□□□□□ -0.07
RFC3-201ENST00000380071 KCNB2Q92953 911 aa14.6□□□□□ -0.07
RFC3-201ENST00000380071 TSPY26PQ9H489 355 aa14.6□□□□□ -0.07
RFC3-201ENST00000380071 SIPA1L3O60292 1781 aaPredicted RBP14.6□□□□□ -0.07
RFC3-201ENST00000380071 NPHP4O75161 1426 aaPredicted RBP14.6□□□□□ -0.07
RFC3-201ENST00000380071 CCDC171Q6TFL3 1326 aa14.6□□□□□ -0.07
RFC3-201ENST00000380071 PIP4K2AP48426 406 aaPredicted RBP14.6□□□□□ -0.07
RFC3-201ENST00000380071 HS1BP3Q53T59 392 aa14.6□□□□□ -0.07
RFC3-201ENST00000380071 VPS53Q5VIR6 699 aa14.6□□□□□ -0.07
RFC3-201ENST00000380071 XAGE3Q8WTP9 111 aa14.6□□□□□ -0.07
RFC3-201ENST00000380071 RBM8AQ9Y5S9 174 aaKnown RBP14.6□□□□□ -0.07
RFC3-201ENST00000380071 GJB2P29033 226 aa14.59□□□□□ -0.07
RFC3-201ENST00000380071 ST3GAL1Q11201 340 aa14.59□□□□□ -0.07
RFC3-201ENST00000380071 COPS6Q7L5N1 327 aa14.59□□□□□ -0.07
RFC3-201ENST00000380071 PROSER2Q86WR7 435 aaPredicted RBP14.59□□□□□ -0.07
RFC3-201ENST00000380071 DDX17Q92841 729 aaKnown RBP14.59□□□□□ -0.07
RFC3-201ENST00000380071 SYAP1Q96A49 352 aaPredicted RBP14.59□□□□□ -0.07
RFC3-201ENST00000380071 SLC52A2Q9HAB3 445 aa14.59□□□□□ -0.07
RFC3-201ENST00000380071 NLRP2Q9NX02 1062 aa14.59□□□□□ -0.07
RFC3-201ENST00000380071 NOL7Q9UMY1 257 aaKnown RBP14.59□□□□□ -0.07
RFC3-201ENST00000380071 CYP46A1Q9Y6A2 500 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms