RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 TTC22Q5TAA0 569 aa16.84■□□□□ 0.29
SNCAIP-203ENST00000379538 SLC4A10Q6U841 1118 aa16.84■□□□□ 0.29
SNCAIP-203ENST00000379538 CCDC9Q9Y3X0 531 aaKnown RBP16.84■□□□□ 0.29
SNCAIP-203ENST00000379538 IL2RBP14784 551 aa16.83■□□□□ 0.28
SNCAIP-203ENST00000379538 SASS6Q6UVJ0 657 aa16.83■□□□□ 0.28
SNCAIP-203ENST00000379538 IFNL2Q8IZJ0 200 aa16.83■□□□□ 0.28
SNCAIP-203ENST00000379538 ZCRB1Q8TBF4 217 aaKnown RBP16.83■□□□□ 0.28
SNCAIP-203ENST00000379538 C8orf37Q96NL8 207 aa16.83■□□□□ 0.28
SNCAIP-203ENST00000379538 A0A0G2JS52 829 aa16.83■□□□□ 0.28
SNCAIP-203ENST00000379538 DTNBO60941 627 aa16.83■□□□□ 0.28
SNCAIP-203ENST00000379538 TSHZ3Q63HK5 1081 aa16.83■□□□□ 0.28
SNCAIP-203ENST00000379538 MAP7D2Q96T17 732 aa16.83■□□□□ 0.28
SNCAIP-203ENST00000379538 CBX1P83916 185 aa16.82■□□□□ 0.28
SNCAIP-203ENST00000379538 CARD10Q9BWT7 1032 aa16.82■□□□□ 0.28
SNCAIP-203ENST00000379538 GADD45BO75293 160 aaPredicted RBP16.81■□□□□ 0.28
SNCAIP-203ENST00000379538 HDGFL1Q5TGJ6 251 aa16.81■□□□□ 0.28
SNCAIP-203ENST00000379538 ZNF710Q8N1W2 664 aa16.81■□□□□ 0.28
SNCAIP-203ENST00000379538 TTC12Q9H892 705 aaPredicted RBP16.81■□□□□ 0.28
SNCAIP-203ENST00000379538 CCDC39Q9UFE4 941 aa16.81■□□□□ 0.28
SNCAIP-203ENST00000379538 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
SNCAIP-203ENST00000379538 PROSER3Q2NL68 480 aa16.81■□□□□ 0.28
SNCAIP-203ENST00000379538 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
SNCAIP-203ENST00000379538 CHPF2Q9P2E5 772 aa16.8■□□□□ 0.28
SNCAIP-203ENST00000379538 NEK4P51957 841 aa16.8■□□□□ 0.28
SNCAIP-203ENST00000379538 SLC52A2Q9HAB3 445 aa16.8■□□□□ 0.28
SNCAIP-203ENST00000379538 HSPA1LP34931 641 aa16.79■□□□□ 0.28
SNCAIP-203ENST00000379538 CSPP1Q1MSJ5 1256 aa16.79■□□□□ 0.28
SNCAIP-203ENST00000379538 ST18O60284 1047 aa16.79■□□□□ 0.28
SNCAIP-203ENST00000379538 IGSF3O75054 1194 aa16.79■□□□□ 0.28
SNCAIP-203ENST00000379538 PTCD1O75127 700 aaKnown RBP16.79■□□□□ 0.28
SNCAIP-203ENST00000379538 SMAP1Q8IYB5 467 aaPredicted RBP16.79■□□□□ 0.28
SNCAIP-203ENST00000379538 ZNF496Q96IT1 587 aaPredicted RBP16.79■□□□□ 0.28
SNCAIP-203ENST00000379538 ZSCAN20P17040 1043 aaPredicted RBP16.78■□□□□ 0.28
SNCAIP-203ENST00000379538 CABP4P57796 275 aa16.78■□□□□ 0.28
SNCAIP-203ENST00000379538 FKBP5Q13451 457 aaPredicted RBP16.78■□□□□ 0.28
SNCAIP-203ENST00000379538 INTS3Q68E01 1043 aaKnown RBP16.78■□□□□ 0.28
SNCAIP-203ENST00000379538 ZNF790Q6PG37 636 aa16.78■□□□□ 0.28
SNCAIP-203ENST00000379538 TMX3Q96JJ7 454 aa16.78■□□□□ 0.28
SNCAIP-203ENST00000379538 USP25Q9UHP3 1055 aa16.78■□□□□ 0.28
SNCAIP-203ENST00000379538 SYTL4Q96C24 671 aaPredicted RBP16.77■□□□□ 0.28
SNCAIP-203ENST00000379538 NGLY1Q96IV0 654 aa16.77■□□□□ 0.28
SNCAIP-203ENST00000379538 DCTPP1Q9H773 170 aa16.77■□□□□ 0.28
SNCAIP-203ENST00000379538 ABCC4O15439 1325 aa16.77■□□□□ 0.27
SNCAIP-203ENST00000379538 KIAA2012Q0VF49 1180 aa16.77■□□□□ 0.27
SNCAIP-203ENST00000379538 ATP2B3Q16720 1220 aa16.77■□□□□ 0.27
SNCAIP-203ENST00000379538 CCDC94Q9BW85 323 aaPredicted RBP16.77■□□□□ 0.27
SNCAIP-203ENST00000379538 CWC22Q9HCG8 908 aaKnown RBP16.77■□□□□ 0.27
SNCAIP-203ENST00000379538 OVOS2A0A0G2JMS6 1433 aa16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 PLEKHG2Q9H7P9 1386 aa16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 SPDYE4A6NLX3 237 aa16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 FLIIQ13045 1269 aa16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 DCAF5Q96JK2 942 aa16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 STK31Q9BXU1 1019 aa16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 USP16Q9Y5T5 823 aa16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 LRRC37A3O60309 1634 aa16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 GIGYF1O75420 1035 aaPredicted RBP16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 PLCB2Q00722 1185 aa16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 AIMP1Q12904 312 aaKnown RBP16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 FAM182BQ5T319 152 aa16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 TSPY26PQ9H489 355 aa16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 PALD1Q9ULE6 856 aa16.76■□□□□ 0.27
SNCAIP-203ENST00000379538 MYL6BP14649 208 aa16.75■□□□□ 0.27
SNCAIP-203ENST00000379538 CCDC30Q5VVM6 783 aa16.75■□□□□ 0.27
SNCAIP-203ENST00000379538 RGS12O14924 1447 aa16.74■□□□□ 0.27
SNCAIP-203ENST00000379538 COL14A1Q05707 1796 aaKnown RBP16.74■□□□□ 0.27
SNCAIP-203ENST00000379538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.74■□□□□ 0.27
SNCAIP-203ENST00000379538 MCM5P33992 734 aa16.74■□□□□ 0.27
SNCAIP-203ENST00000379538 BRPF1P55201 1214 aaPredicted RBP16.74■□□□□ 0.27
SNCAIP-203ENST00000379538 MYRIPQ8NFW9 859 aa16.74■□□□□ 0.27
SNCAIP-203ENST00000379538 MEIS3Q99687 375 aa16.74■□□□□ 0.27
SNCAIP-203ENST00000379538 UPF3BQ9BZI7 483 aaKnown RBP16.74■□□□□ 0.27
SNCAIP-203ENST00000379538 PCDH11XQ9BZA7 1347 aa16.73■□□□□ 0.27
SNCAIP-203ENST00000379538 PCDH11YQ9BZA8 1340 aa16.73■□□□□ 0.27
SNCAIP-203ENST00000379538 LARP6Q9BRS8 491 aaKnown RBP16.73■□□□□ 0.27
SNCAIP-203ENST00000379538 FAM98CQ17RN3 349 aaKnown RBP16.73■□□□□ 0.27
SNCAIP-203ENST00000379538 PPP4R3BQ5MIZ7 849 aa16.73■□□□□ 0.27
SNCAIP-203ENST00000379538 ACSBG1Q96GR2 724 aa16.73■□□□□ 0.27
SNCAIP-203ENST00000379538 NOLC1Q14978 699 aaKnown RBP eCLIP16.72■□□□□ 0.27
SNCAIP-203ENST00000379538 ARHGAP45Q92619 1136 aa16.72■□□□□ 0.27
SNCAIP-203ENST00000379538 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
SNCAIP-203ENST00000379538 ASAP1Q9ULH1 1129 aa16.72■□□□□ 0.27
SNCAIP-203ENST00000379538 HCLS1P14317 486 aaPredicted RBP16.71■□□□□ 0.27
SNCAIP-203ENST00000379538 DMTNQ08495 405 aa16.71■□□□□ 0.27
SNCAIP-203ENST00000379538 NWD2Q9ULI1 1742 aa16.71■□□□□ 0.27
SNCAIP-203ENST00000379538 BRD1O95696 1058 aa16.71■□□□□ 0.26
SNCAIP-203ENST00000379538 USP48Q86UV5 1035 aa16.71■□□□□ 0.26
SNCAIP-203ENST00000379538 TTC5Q8N0Z6 440 aa16.71■□□□□ 0.26
SNCAIP-203ENST00000379538 API5Q9BZZ5 524 aaKnown RBP16.71■□□□□ 0.26
SNCAIP-203ENST00000379538 PI4KAP2A4QPH2 592 aa16.7■□□□□ 0.26
SNCAIP-203ENST00000379538 CEP85Q6P2H3 762 aa16.7■□□□□ 0.26
SNCAIP-203ENST00000379538 PI4KAP1Q8N8J0 262 aa16.7■□□□□ 0.26
SNCAIP-203ENST00000379538 ADCY5O95622 1261 aa16.7■□□□□ 0.26
SNCAIP-203ENST00000379538 MTERF4Q7Z6M4 381 aaKnown RBP16.7■□□□□ 0.26
SNCAIP-203ENST00000379538 EXOC5O00471 708 aa16.69■□□□□ 0.26
SNCAIP-203ENST00000379538 ERC2O15083 957 aa16.69■□□□□ 0.26
SNCAIP-203ENST00000379538 PIGBQ92521 554 aa16.69■□□□□ 0.26
SNCAIP-203ENST00000379538 SPATA31A1Q5TZJ5 1347 aa16.69■□□□□ 0.26
SNCAIP-203ENST00000379538 MBD3O95983 291 aa16.68■□□□□ 0.26
SNCAIP-203ENST00000379538 CASC1Q6TDU7 716 aa16.68■□□□□ 0.26
SNCAIP-203ENST00000379538 ANKRD44Q8N8A2 993 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms