RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 TOM1O60784 492 aa18.51■□□□□ 0.55
SNX2-201ENST00000379516 NUTM1Q86Y26 1132 aa18.51■□□□□ 0.55
SNX2-201ENST00000379516 PIGBQ92521 554 aa18.51■□□□□ 0.55
SNX2-201ENST00000379516 UBR2Q8IWV8 1755 aa18.51■□□□□ 0.55
SNX2-201ENST00000379516 PAPPAQ13219 1627 aa18.51■□□□□ 0.55
SNX2-201ENST00000379516 PHLPP1O60346 1717 aa18.5■□□□□ 0.55
SNX2-201ENST00000379516 ASAP1Q9ULH1 1129 aa18.5■□□□□ 0.55
SNX2-201ENST00000379516 PA2G4Q9UQ80 394 aaKnown RBP18.5■□□□□ 0.55
SNX2-201ENST00000379516 TOGARAM1Q9Y4F4 1720 aa18.5■□□□□ 0.55
SNX2-201ENST00000379516 NUTM2BA6NNL0 878 aaPredicted RBP18.49■□□□□ 0.55
SNX2-201ENST00000379516 NUTM2EB1AL46 878 aaPredicted RBP18.49■□□□□ 0.55
SNX2-201ENST00000379516 ATP5J2-PTCD1G3V325 749 aa18.49■□□□□ 0.55
SNX2-201ENST00000379516 NUTM2AQ8IVF1 878 aaPredicted RBP18.49■□□□□ 0.55
SNX2-201ENST00000379516 TRIM6-TRIM34B2RNG4 842 aa18.48■□□□□ 0.55
SNX2-201ENST00000379516 TTLL7Q6ZT98 887 aa18.48■□□□□ 0.55
SNX2-201ENST00000379516 JARID2Q92833 1246 aaPredicted RBP18.48■□□□□ 0.55
SNX2-201ENST00000379516 RILPL2Q969X0 211 aa18.48■□□□□ 0.55
SNX2-201ENST00000379516 AOX1Q06278 1338 aa18.48■□□□□ 0.55
SNX2-201ENST00000379516 ERC1Q8IUD2 1116 aa18.47■□□□□ 0.55
SNX2-201ENST00000379516 ATG3Q9NT62 314 aa18.47■□□□□ 0.55
SNX2-201ENST00000379516 EPHA10Q5JZY3 1008 aa18.46■□□□□ 0.55
SNX2-201ENST00000379516 KIF2CQ99661 725 aa18.46■□□□□ 0.55
SNX2-201ENST00000379516 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
SNX2-201ENST00000379516 A0A087WZG4 1122 aa18.46■□□□□ 0.55
SNX2-201ENST00000379516 UBE3BQ7Z3V4 1068 aa18.46■□□□□ 0.55
SNX2-201ENST00000379516 CLASRPQ8N2M8 674 aaKnown RBP18.46■□□□□ 0.55
SNX2-201ENST00000379516 G3BP1Q13283 466 aaKnown RBP eCLIP18.45■□□□□ 0.54
SNX2-201ENST00000379516 HSCBQ8IWL3 235 aa18.45■□□□□ 0.54
SNX2-201ENST00000379516 VSIG10Q8N0Z9 540 aa18.45■□□□□ 0.54
SNX2-201ENST00000379516 SYTL4Q96C24 671 aaPredicted RBP18.45■□□□□ 0.54
SNX2-201ENST00000379516 TEX13AQ9BXU3 409 aaPredicted RBP18.45■□□□□ 0.54
SNX2-201ENST00000379516 USP26Q9BXU7 913 aa18.45■□□□□ 0.54
SNX2-201ENST00000379516 SPATA31A1Q5TZJ5 1347 aa18.45■□□□□ 0.54
SNX2-201ENST00000379516 DNAJC10Q8IXB1 793 aa18.44■□□□□ 0.54
SNX2-201ENST00000379516 SLKQ9H2G2 1235 aaPredicted RBP18.44■□□□□ 0.54
SNX2-201ENST00000379516 ZBTB3Q9H5J0 574 aa18.44■□□□□ 0.54
SNX2-201ENST00000379516 ARFGEF2Q9Y6D5 1785 aa18.44■□□□□ 0.54
SNX2-201ENST00000379516 ERC2O15083 957 aa18.44■□□□□ 0.54
SNX2-201ENST00000379516 REC8O95072 547 aa18.44■□□□□ 0.54
SNX2-201ENST00000379516 CDCA7Q9BWT1 371 aaPredicted RBP18.44■□□□□ 0.54
SNX2-201ENST00000379516 PLCH1Q4KWH8 1693 aa18.44■□□□□ 0.54
SNX2-201ENST00000379516 UNC5CLQ8IV45 518 aa18.43■□□□□ 0.54
SNX2-201ENST00000379516 PI4K2BQ8TCG2 481 aa18.43■□□□□ 0.54
SNX2-201ENST00000379516 THRAP3Q9Y2W1 955 aaKnown RBP18.43■□□□□ 0.54
SNX2-201ENST00000379516 ZNF330Q9Y3S2 320 aaPredicted RBP18.43■□□□□ 0.54
SNX2-201ENST00000379516 RTL5Q5HYW3 569 aaPredicted RBP18.43■□□□□ 0.54
SNX2-201ENST00000379516 SPRYD3Q8NCJ5 442 aa18.43■□□□□ 0.54
SNX2-201ENST00000379516 SIL1Q9H173 461 aa18.43■□□□□ 0.54
SNX2-201ENST00000379516 BCL9O00512 1426 aa18.42■□□□□ 0.54
SNX2-201ENST00000379516 STARD3NLO95772 234 aa18.42■□□□□ 0.54
SNX2-201ENST00000379516 KLHDC4Q8TBB5 520 aa18.42■□□□□ 0.54
SNX2-201ENST00000379516 SNX21Q969T3 373 aa18.42■□□□□ 0.54
SNX2-201ENST00000379516 UBAP1LF5GYI3 381 aa18.41■□□□□ 0.54
SNX2-201ENST00000379516 MAP4K4O95819 1239 aaPredicted RBP18.41■□□□□ 0.54
SNX2-201ENST00000379516 IFIT2P09913 472 aaKnown RBP18.41■□□□□ 0.54
SNX2-201ENST00000379516 CHMLP26374 656 aa18.41■□□□□ 0.54
SNX2-201ENST00000379516 DDB1Q16531 1140 aa18.41■□□□□ 0.54
SNX2-201ENST00000379516 CWC25Q9NXE8 425 aaPredicted RBP18.41■□□□□ 0.54
SNX2-201ENST00000379516 CCDC9Q9Y3X0 531 aaKnown RBP18.41■□□□□ 0.54
SNX2-201ENST00000379516 SASH1O94885 1247 aa18.41■□□□□ 0.54
SNX2-201ENST00000379516 PRIM1P49642 420 aaKnown RBP18.41■□□□□ 0.54
SNX2-201ENST00000379516 CASP7P55210 303 aa18.41■□□□□ 0.54
SNX2-201ENST00000379516 TTC41PQ6P2S7 1318 aa18.41■□□□□ 0.54
SNX2-201ENST00000379516 AACSQ86V21 672 aa18.4■□□□□ 0.54
SNX2-201ENST00000379516 ESYT1Q9BSJ8 1104 aa18.4■□□□□ 0.54
SNX2-201ENST00000379516 AFDNP55196 1824 aaKnown RBP18.4■□□□□ 0.54
SNX2-201ENST00000379516 USP42Q9H9J4 1324 aaKnown RBP18.4■□□□□ 0.54
SNX2-201ENST00000379516 COL15A1P39059 1388 aa18.4■□□□□ 0.54
SNX2-201ENST00000379516 H7C1W4 665 aa18.4■□□□□ 0.54
SNX2-201ENST00000379516 RABL6Q3YEC7 729 aaPredicted RBP18.4■□□□□ 0.54
SNX2-201ENST00000379516 CCDC191Q8NCU4 936 aa18.39■□□□□ 0.53
SNX2-201ENST00000379516 GPATCH3Q96I76 525 aa18.39■□□□□ 0.53
SNX2-201ENST00000379516 ITGB4P16144 1822 aa18.39■□□□□ 0.53
SNX2-201ENST00000379516 SPATA31A5Q5VU36 1347 aa18.39■□□□□ 0.53
SNX2-201ENST00000379516 SPATA31A7Q8IWB4 1347 aa18.39■□□□□ 0.53
SNX2-201ENST00000379516 LRP6O75581 1613 aa18.39■□□□□ 0.53
SNX2-201ENST00000379516 NRAPQ86VF7 1730 aa18.39■□□□□ 0.53
SNX2-201ENST00000379516 GLRX3O76003 335 aaKnown RBP18.38■□□□□ 0.53
SNX2-201ENST00000379516 NFKBIBQ15653 356 aa18.38■□□□□ 0.53
SNX2-201ENST00000379516 CNTROBQ8N137 903 aa18.38■□□□□ 0.53
SNX2-201ENST00000379516 ECHDC1Q9NTX5 307 aa18.38■□□□□ 0.53
SNX2-201ENST00000379516 TUBGCP6Q96RT7 1819 aa18.38■□□□□ 0.53
SNX2-201ENST00000379516 A0A0G2JS52 829 aa18.38■□□□□ 0.53
SNX2-201ENST00000379516 RFX5P48382 616 aaPredicted RBP18.38■□□□□ 0.53
SNX2-201ENST00000379516 KIF6Q6ZMV9 814 aa18.38■□□□□ 0.53
SNX2-201ENST00000379516 SLC4A9Q96Q91 983 aa18.38■□□□□ 0.53
SNX2-201ENST00000379516 ARXQ96QS3 562 aa18.38■□□□□ 0.53
SNX2-201ENST00000379516 ANTXR1Q9H6X2 564 aa18.38■□□□□ 0.53
SNX2-201ENST00000379516 COPRSQ9NQ92 184 aa18.38■□□□□ 0.53
SNX2-201ENST00000379516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.38■□□□□ 0.53
SNX2-201ENST00000379516 WNK3Q9BYP7 1800 aa18.37■□□□□ 0.53
SNX2-201ENST00000379516 PTPN12Q05209 780 aaKnown RBP18.37■□□□□ 0.53
SNX2-201ENST00000379516 LMBR1LQ6UX01 489 aa18.37■□□□□ 0.53
SNX2-201ENST00000379516 EAF2Q96CJ1 260 aaPredicted RBP18.37■□□□□ 0.53
SNX2-201ENST00000379516 CCDC8Q9H0W5 538 aaPredicted RBP18.37■□□□□ 0.53
SNX2-201ENST00000379516 CHMP3Q9Y3E7 222 aa18.37■□□□□ 0.53
SNX2-201ENST00000379516 NUP188Q5SRE5 1749 aa18.36■□□□□ 0.53
SNX2-201ENST00000379516 SLIT2O94813 1529 aa18.36■□□□□ 0.53
SNX2-201ENST00000379516 CYP19A1P11511 503 aaPredicted RBP18.36■□□□□ 0.53
SNX2-201ENST00000379516 FOXO4P98177 505 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms