RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 SP4Q02446 784 aa16.31■□□□□ 0.2
TRIM13-202ENST00000378182 KIF1BPQ96EK5 621 aa16.31■□□□□ 0.2
TRIM13-202ENST00000378182 NCOA2Q15596 1464 aa16.31■□□□□ 0.2
TRIM13-202ENST00000378182 MTIF2P46199 727 aaKnown RBP16.31■□□□□ 0.2
TRIM13-202ENST00000378182 PPP1R42Q7Z4L9 355 aa16.31■□□□□ 0.2
TRIM13-202ENST00000378182 OGFOD1Q8N543 542 aa16.31■□□□□ 0.2
TRIM13-202ENST00000378182 TMEM67Q5HYA8 995 aa16.31■□□□□ 0.2
TRIM13-202ENST00000378182 DDX23Q9BUQ8 820 aaKnown RBP16.31■□□□□ 0.2
TRIM13-202ENST00000378182 C9orf84Q5VXU9 1444 aa16.3■□□□□ 0.2
TRIM13-202ENST00000378182 PHACTR2O75167 634 aa16.3■□□□□ 0.2
TRIM13-202ENST00000378182 CCDC40Q4G0X9 1142 aa16.3■□□□□ 0.2
TRIM13-202ENST00000378182 POLD1P28340 1107 aa16.3■□□□□ 0.2
TRIM13-202ENST00000378182 BRD4O60885 1362 aaPredicted RBP16.3■□□□□ 0.2
TRIM13-202ENST00000378182 TSPY3P0CV98 308 aa16.3■□□□□ 0.2
TRIM13-202ENST00000378182 TSPY8P0CW00 308 aa16.3■□□□□ 0.2
TRIM13-202ENST00000378182 CCDC196A0A1B0GTZ2 297 aa16.3■□□□□ 0.2
TRIM13-202ENST00000378182 LDHAL6AQ6ZMR3 332 aa16.3■□□□□ 0.2
TRIM13-202ENST00000378182 NFE2L2Q16236 605 aa16.3■□□□□ 0.2
TRIM13-202ENST00000378182 FGFR1OPO95684 399 aaKnown RBP16.3■□□□□ 0.2
TRIM13-202ENST00000378182 TFCP2L1Q9NZI6 479 aa16.3■□□□□ 0.2
TRIM13-202ENST00000378182 JAG2Q9Y219 1238 aa16.3■□□□□ 0.2
TRIM13-202ENST00000378182 AMOTL2Q9Y2J4 779 aa16.3■□□□□ 0.2
TRIM13-202ENST00000378182 NME9Q86XW9 330 aa16.29■□□□□ 0.2
TRIM13-202ENST00000378182 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
TRIM13-202ENST00000378182 EP400NLQ6ZTU2 488 aa16.29■□□□□ 0.2
TRIM13-202ENST00000378182 CNNM3Q8NE01 707 aa16.29■□□□□ 0.2
TRIM13-202ENST00000378182 ZSCAN31Q96LW9 406 aaPredicted RBP16.29■□□□□ 0.2
TRIM13-202ENST00000378182 CALM1P0DP23 149 aa16.29■□□□□ 0.2
TRIM13-202ENST00000378182 CALM2P0DP24 149 aa16.29■□□□□ 0.2
TRIM13-202ENST00000378182 CALM3P0DP25 149 aa16.29■□□□□ 0.2
TRIM13-202ENST00000378182 PDE4BQ07343 736 aa16.29■□□□□ 0.2
TRIM13-202ENST00000378182 TSNARE1Q96NA8 513 aa16.29■□□□□ 0.2
TRIM13-202ENST00000378182 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
TRIM13-202ENST00000378182 GJC1P36383 396 aa16.28■□□□□ 0.2
TRIM13-202ENST00000378182 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
TRIM13-202ENST00000378182 CCDC174Q6PII3 467 aa16.28■□□□□ 0.2
TRIM13-202ENST00000378182 SLC52A1Q9NWF4 448 aa16.28■□□□□ 0.2
TRIM13-202ENST00000378182 LMOD1P29536 600 aaPredicted RBP16.28■□□□□ 0.2
TRIM13-202ENST00000378182 AAMPQ13685 434 aa16.28■□□□□ 0.2
TRIM13-202ENST00000378182 CETN1Q12798 172 aa16.28■□□□□ 0.2
TRIM13-202ENST00000378182 EPRSP07814 1512 aaKnown RBP16.28■□□□□ 0.2
TRIM13-202ENST00000378182 TMEM110-MUSTN1A8MSY1 372 aa16.27■□□□□ 0.2
TRIM13-202ENST00000378182 BIN1O00499 593 aa16.27■□□□□ 0.2
TRIM13-202ENST00000378182 CWC25Q9NXE8 425 aaPredicted RBP16.27■□□□□ 0.2
TRIM13-202ENST00000378182 FERP16591 822 aa16.27■□□□□ 0.2
TRIM13-202ENST00000378182 STAC3Q96MF2 364 aa16.27■□□□□ 0.19
TRIM13-202ENST00000378182 TMPOP42166 694 aaKnown RBP16.27■□□□□ 0.19
TRIM13-202ENST00000378182 MICU3Q86XE3 530 aa16.27■□□□□ 0.19
TRIM13-202ENST00000378182 SLC26A6Q9BXS9 759 aa16.27■□□□□ 0.19
TRIM13-202ENST00000378182 MAP3K11Q16584 847 aa16.27■□□□□ 0.19
TRIM13-202ENST00000378182 HEATR3Q7Z4Q2 680 aa16.27■□□□□ 0.19
TRIM13-202ENST00000378182 APBB1IPQ7Z5R6 666 aaPredicted RBP16.27■□□□□ 0.19
TRIM13-202ENST00000378182 ANKRD30BQ9BXX2 1392 aa16.26■□□□□ 0.19
TRIM13-202ENST00000378182 CBX1P83916 185 aa16.26■□□□□ 0.19
TRIM13-202ENST00000378182 PHF8Q9UPP1 1060 aa16.26■□□□□ 0.19
TRIM13-202ENST00000378182 CFTRP13569 1480 aa16.26■□□□□ 0.19
TRIM13-202ENST00000378182 C11orf95C9JLR9 678 aaPredicted RBP16.26■□□□□ 0.19
TRIM13-202ENST00000378182 MAPK8IP2Q13387 824 aaPredicted RBP16.26■□□□□ 0.19
TRIM13-202ENST00000378182 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
TRIM13-202ENST00000378182 PARP3Q9Y6F1 533 aa16.26■□□□□ 0.19
TRIM13-202ENST00000378182 AKNAQ7Z591 1439 aa16.26■□□□□ 0.19
TRIM13-202ENST00000378182 RNF41Q9H4P4 317 aaPredicted RBP16.26■□□□□ 0.19
TRIM13-202ENST00000378182 SYCE3A1L190 88 aa16.26■□□□□ 0.19
TRIM13-202ENST00000378182 MFSD6Q6ZSS7 791 aa16.26■□□□□ 0.19
TRIM13-202ENST00000378182 TCP11L1Q9NUJ3 509 aa16.26■□□□□ 0.19
TRIM13-202ENST00000378182 MX1P20591 662 aa16.25■□□□□ 0.19
TRIM13-202ENST00000378182 CCDC61Q9Y6R9 512 aa16.25■□□□□ 0.19
TRIM13-202ENST00000378182 FERMT1Q9BQL6 677 aa16.25■□□□□ 0.19
TRIM13-202ENST00000378182 RAB11FIP3O75154 756 aa16.25■□□□□ 0.19
TRIM13-202ENST00000378182 HLTFQ14527 1009 aaKnown RBP eCLIP16.25■□□□□ 0.19
TRIM13-202ENST00000378182 CRACR2AQ9BSW2 395 aa16.25■□□□□ 0.19
TRIM13-202ENST00000378182 SIRT1Q96EB6 747 aa16.25■□□□□ 0.19
TRIM13-202ENST00000378182 HYPKQ9NX55 129 aa16.25■□□□□ 0.19
TRIM13-202ENST00000378182 LRPPRCP42704 1394 aaKnown RBP16.24■□□□□ 0.19
TRIM13-202ENST00000378182 WDR63Q8IWG1 891 aa16.24■□□□□ 0.19
TRIM13-202ENST00000378182 SH3BP5O60239 455 aa16.24■□□□□ 0.19
TRIM13-202ENST00000378182 KIF5BP33176 963 aa16.24■□□□□ 0.19
TRIM13-202ENST00000378182 TMCO3Q6UWJ1 677 aa16.24■□□□□ 0.19
TRIM13-202ENST00000378182 KIF5CO60282 957 aa16.24■□□□□ 0.19
TRIM13-202ENST00000378182 CCDC152Q4G0S7 254 aa16.24■□□□□ 0.19
TRIM13-202ENST00000378182 PPP1R14CQ8TAE6 165 aa16.24■□□□□ 0.19
TRIM13-202ENST00000378182 CIZ1Q9ULV3 898 aaPredicted RBP16.24■□□□□ 0.19
TRIM13-202ENST00000378182 TTC21AQ8NDW8 1320 aa16.24■□□□□ 0.19
TRIM13-202ENST00000378182 GCOM1H8Y6P7 765 aaPredicted RBP16.24■□□□□ 0.19
TRIM13-202ENST00000378182 MYZAPP0CAP1 466 aa16.24■□□□□ 0.19
TRIM13-202ENST00000378182 TOP1P11387 765 aaKnown RBP16.24■□□□□ 0.19
TRIM13-202ENST00000378182 GLRX3O76003 335 aaKnown RBP16.24■□□□□ 0.19
TRIM13-202ENST00000378182 TICAM2Q86XR7 235 aa16.24■□□□□ 0.19
TRIM13-202ENST00000378182 TCHPQ9BT92 498 aa16.24■□□□□ 0.19
TRIM13-202ENST00000378182 CRNKL1Q9BZJ0 848 aaKnown RBP16.24■□□□□ 0.19
TRIM13-202ENST00000378182 STX6O43752 255 aa16.23■□□□□ 0.19
TRIM13-202ENST00000378182 TBCAO75347 108 aaKnown RBP16.23■□□□□ 0.19
TRIM13-202ENST00000378182 KIF4BQ2VIQ3 1234 aa16.23■□□□□ 0.19
TRIM13-202ENST00000378182 PAIP2Q9BPZ3 127 aaKnown RBP16.23■□□□□ 0.19
TRIM13-202ENST00000378182 MRVI1Q9Y6F6 885 aa16.23■□□□□ 0.19
TRIM13-202ENST00000378182 PHAXQ9H814 394 aaKnown RBP16.23■□□□□ 0.19
TRIM13-202ENST00000378182 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.23■□□□□ 0.19
TRIM13-202ENST00000378182 NCBP1Q09161 790 aaKnown RBP16.23■□□□□ 0.19
TRIM13-202ENST00000378182 DMRT2Q9Y5R5 561 aa16.23■□□□□ 0.19
TRIM13-202ENST00000378182 GRIN2BQ13224 1484 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms