RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 NEXNQ0ZGT2 675 aa23.44■■□□□ 1.34
PCDHA4-201ENST00000378125 GBP4Q96PP9 640 aa23.44■■□□□ 1.34
PCDHA4-201ENST00000378125 SLAIN2Q9P270 581 aa23.44■■□□□ 1.34
PCDHA4-201ENST00000378125 MCCP23508 829 aa23.44■■□□□ 1.34
PCDHA4-201ENST00000378125 FMNL2Q96PY5 1086 aa23.44■■□□□ 1.34
PCDHA4-201ENST00000378125 NEURL1BA8MQ27 555 aa23.43■■□□□ 1.34
PCDHA4-201ENST00000378125 CWC27Q6UX04 472 aaKnown RBP23.43■■□□□ 1.34
PCDHA4-201ENST00000378125 ANKRD13DQ6ZTN6 518 aa23.43■■□□□ 1.34
PCDHA4-201ENST00000378125 CNTROBQ8N137 903 aa23.43■■□□□ 1.34
PCDHA4-201ENST00000378125 RTN4Q9NQC3 1192 aaKnown RBP23.43■■□□□ 1.34
PCDHA4-201ENST00000378125 STRN4Q9NRL3 753 aa23.43■■□□□ 1.34
PCDHA4-201ENST00000378125 CPDO75976 1380 aa23.43■■□□□ 1.34
PCDHA4-201ENST00000378125 LMTK3Q96Q04 1460 aa23.42■■□□□ 1.34
PCDHA4-201ENST00000378125 AACSQ86V21 672 aa23.42■■□□□ 1.34
PCDHA4-201ENST00000378125 UPF3BQ9BZI7 483 aaKnown RBP23.42■■□□□ 1.34
PCDHA4-201ENST00000378125 ATP5J2-PTCD1G3V325 749 aa23.42■■□□□ 1.34
PCDHA4-201ENST00000378125 PTCD1O75127 700 aaKnown RBP23.42■■□□□ 1.34
PCDHA4-201ENST00000378125 IFIT2P09913 472 aaKnown RBP23.42■■□□□ 1.34
PCDHA4-201ENST00000378125 EPHA10Q5JZY3 1008 aa23.42■■□□□ 1.34
PCDHA4-201ENST00000378125 GCKRQ14397 625 aa23.41■■□□□ 1.34
PCDHA4-201ENST00000378125 DDX54Q8TDD1 881 aaKnown RBP23.41■■□□□ 1.34
PCDHA4-201ENST00000378125 METTL22Q9BUU2 404 aaPredicted RBP23.41■■□□□ 1.34
PCDHA4-201ENST00000378125 CCDC8Q9H0W5 538 aaPredicted RBP23.41■■□□□ 1.34
PCDHA4-201ENST00000378125 SASH1O94885 1247 aa23.4■■□□□ 1.34
PCDHA4-201ENST00000378125 G3BP1Q13283 466 aaKnown RBP eCLIP23.4■■□□□ 1.34
PCDHA4-201ENST00000378125 LRP10Q7Z4F1 713 aa23.4■■□□□ 1.34
PCDHA4-201ENST00000378125 ZCRB1Q8TBF4 217 aaKnown RBP23.39■■□□□ 1.34
PCDHA4-201ENST00000378125 HDAC5Q9UQL6 1122 aa23.39■■□□□ 1.34
PCDHA4-201ENST00000378125 UTYO14607 1347 aa23.39■■□□□ 1.34
PCDHA4-201ENST00000378125 WDR17Q8IZU2 1322 aa23.39■■□□□ 1.34
PCDHA4-201ENST00000378125 GLRX3O76003 335 aaKnown RBP23.38■■□□□ 1.33
PCDHA4-201ENST00000378125 ECHDC1Q9NTX5 307 aa23.38■■□□□ 1.33
PCDHA4-201ENST00000378125 TMX3Q96JJ7 454 aa23.38■■□□□ 1.33
PCDHA4-201ENST00000378125 TLR7Q9NYK1 1049 aaKnown RBP23.38■■□□□ 1.33
PCDHA4-201ENST00000378125 SGSM2O43147 1006 aa23.37■■□□□ 1.33
PCDHA4-201ENST00000378125 FOXD4L5Q5VV16 416 aaPredicted RBP23.37■■□□□ 1.33
PCDHA4-201ENST00000378125 ERC1Q8IUD2 1116 aa23.37■■□□□ 1.33
PCDHA4-201ENST00000378125 FOXD4L4Q8WXT5 416 aaPredicted RBP23.37■■□□□ 1.33
PCDHA4-201ENST00000378125 EAF2Q96CJ1 260 aaPredicted RBP23.37■■□□□ 1.33
PCDHA4-201ENST00000378125 TTC41PQ6P2S7 1318 aa23.37■■□□□ 1.33
PCDHA4-201ENST00000378125 PKD1L3Q7Z443 1732 aa23.36■■□□□ 1.33
PCDHA4-201ENST00000378125 UBE3BQ7Z3V4 1068 aa23.36■■□□□ 1.33
PCDHA4-201ENST00000378125 SOS2Q07890 1332 aaPredicted RBP23.36■■□□□ 1.33
PCDHA4-201ENST00000378125 KDM4FA0A1W2PPD8 638 aa23.36■■□□□ 1.33
PCDHA4-201ENST00000378125 BAG4O95429 457 aaKnown RBP23.36■■□□□ 1.33
PCDHA4-201ENST00000378125 MRC1P22897 1456 aa23.36■■□□□ 1.33
PCDHA4-201ENST00000378125 STRCQ7RTU9 1775 aa23.35■■□□□ 1.33
PCDHA4-201ENST00000378125 PCDH11XQ9BZA7 1347 aa23.35■■□□□ 1.33
PCDHA4-201ENST00000378125 PCDH11YQ9BZA8 1340 aa23.35■■□□□ 1.33
PCDHA4-201ENST00000378125 USP42Q9H9J4 1324 aaKnown RBP23.35■■□□□ 1.33
PCDHA4-201ENST00000378125 DIAPH3Q9NSV4 1193 aa23.34■■□□□ 1.33
PCDHA4-201ENST00000378125 GOLGA6L3A6NEY3 463 aa23.34■■□□□ 1.33
PCDHA4-201ENST00000378125 HSPA4P34932 840 aa23.34■■□□□ 1.33
PCDHA4-201ENST00000378125 EVA1CP58658 441 aa23.34■■□□□ 1.33
PCDHA4-201ENST00000378125 ANAPC15P60006 121 aa23.34■■□□□ 1.33
PCDHA4-201ENST00000378125 GPATCH3Q96I76 525 aa23.34■■□□□ 1.33
PCDHA4-201ENST00000378125 CHAMP1Q96JM3 812 aa23.34■■□□□ 1.33
PCDHA4-201ENST00000378125 NUCB2P80303 420 aa23.33■■□□□ 1.33
PCDHA4-201ENST00000378125 MCTP1Q6DN14 999 aa23.33■■□□□ 1.33
PCDHA4-201ENST00000378125 LSG1Q9H089 658 aaKnown RBP23.33■■□□□ 1.33
PCDHA4-201ENST00000378125 NBPF26B4DH59 902 aa23.33■■□□□ 1.33
PCDHA4-201ENST00000378125 NBPF14Q5TI25 921 aa23.33■■□□□ 1.33
PCDHA4-201ENST00000378125 NBPF10Q6P3W6 841 aaKnown RBP23.33■■□□□ 1.33
PCDHA4-201ENST00000378125 NBPF15Q8N660 670 aa23.33■■□□□ 1.33
PCDHA4-201ENST00000378125 COL5A2P05997 1499 aaPredicted RBP23.33■■□□□ 1.32
PCDHA4-201ENST00000378125 ABCC6O95255 1503 aa23.32■■□□□ 1.32
PCDHA4-201ENST00000378125 A0A087WZG4 1122 aa23.32■■□□□ 1.32
PCDHA4-201ENST00000378125 A1BGP04217 495 aa23.32■■□□□ 1.32
PCDHA4-201ENST00000378125 KIAA1211Q6ZU35 1233 aa23.32■■□□□ 1.32
PCDHA4-201ENST00000378125 LARP6Q9BRS8 491 aaKnown RBP23.32■■□□□ 1.32
PCDHA4-201ENST00000378125 CWC22Q9HCG8 908 aaKnown RBP23.32■■□□□ 1.32
PCDHA4-201ENST00000378125 IL2RBP14784 551 aa23.32■■□□□ 1.32
PCDHA4-201ENST00000378125 BOLA2Q9H3K6 86 aa23.32■■□□□ 1.32
PCDHA4-201ENST00000378125 RAD50Q92878 1312 aa23.31■■□□□ 1.32
PCDHA4-201ENST00000378125 TTLL7Q6ZT98 887 aa23.31■■□□□ 1.32
PCDHA4-201ENST00000378125 RASEFQ8IZ41 740 aa23.31■■□□□ 1.32
PCDHA4-201ENST00000378125 ZDHHC9Q9Y397 364 aa23.31■■□□□ 1.32
PCDHA4-201ENST00000378125 SNX14Q9Y5W7 946 aa23.31■■□□□ 1.32
PCDHA4-201ENST00000378125 CYP2E1P05181 493 aaPredicted RBP23.3■■□□□ 1.32
PCDHA4-201ENST00000378125 GOLGA6L22H0YM25 854 aa23.3■■□□□ 1.32
PCDHA4-201ENST00000378125 PTH1RQ03431 593 aa23.3■■□□□ 1.32
PCDHA4-201ENST00000378125 L1TD1Q5T7N2 865 aaKnown RBP23.3■■□□□ 1.32
PCDHA4-201ENST00000378125 CPA1P15085 419 aa23.29■■□□□ 1.32
PCDHA4-201ENST00000378125 CHMP3Q9Y3E7 222 aa23.29■■□□□ 1.32
PCDHA4-201ENST00000378125 XRCC6P12956 609 aaKnown RBP eCLIP23.28■■□□□ 1.32
PCDHA4-201ENST00000378125 PLBD2Q8NHP8 589 aa23.28■■□□□ 1.32
PCDHA4-201ENST00000378125 ZBTB3Q9H5J0 574 aa23.28■■□□□ 1.32
PCDHA4-201ENST00000378125 ZNF330Q9Y3S2 320 aaPredicted RBP23.28■■□□□ 1.32
PCDHA4-201ENST00000378125 AFDNP55196 1824 aaKnown RBP23.27■■□□□ 1.32
PCDHA4-201ENST00000378125 MCM2P49736 904 aa23.27■■□□□ 1.32
PCDHA4-201ENST00000378125 EVI5LQ96CN4 794 aa23.27■■□□□ 1.32
PCDHA4-201ENST00000378125 FAM227BQ96M60 508 aa23.27■■□□□ 1.32
PCDHA4-201ENST00000378125 CARD10Q9BWT7 1032 aa23.27■■□□□ 1.32
PCDHA4-201ENST00000378125 CCDC9Q9Y3X0 531 aaKnown RBP23.27■■□□□ 1.32
PCDHA4-201ENST00000378125 FSD2A1L4K1 749 aa23.27■■□□□ 1.32
PCDHA4-201ENST00000378125 PANK2Q9BZ23 570 aa23.27■■□□□ 1.32
PCDHA4-201ENST00000378125 PTPN12Q05209 780 aaKnown RBP23.26■■□□□ 1.31
PCDHA4-201ENST00000378125 TFCP2Q12800 502 aa23.26■■□□□ 1.31
PCDHA4-201ENST00000378125 EDC3Q96F86 508 aaKnown RBP23.26■■□□□ 1.31
PCDHA4-201ENST00000378125 NDUFB9Q9Y6M9 179 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms