RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 MAP2K1Q02750 393 aaPredicted RBP21.97■■□□□ 1.11
TBC1D4-201ENST00000377625 TRIM27P14373 513 aa21.97■■□□□ 1.11
TBC1D4-201ENST00000377625 CCDC12Q8WUD4 166 aaPredicted RBP21.97■■□□□ 1.11
TBC1D4-201ENST00000377625 USP8P40818 1118 aa21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 TMEM67Q5HYA8 995 aa21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 NAIPQ13075 1403 aa21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 NGLY1Q96IV0 654 aa21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 CDC5LQ99459 802 aaKnown RBP21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 CWC25Q9NXE8 425 aaPredicted RBP21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 MACROD2A1Z1Q3 448 aa21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 IARSP41252 1262 aaKnown RBP21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 CCDC144CPQ8IYA2 1237 aa21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 CALML4Q96GE6 196 aa21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 SNRKQ9NRH2 765 aa21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 USP16Q9Y5T5 823 aa21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 PRKCSHP14314 528 aaPredicted RBP21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 KIF5BP33176 963 aa21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 MTIF2P46199 727 aaKnown RBP21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 SKAP1Q86WV1 359 aa21.96■■□□□ 1.11
TBC1D4-201ENST00000377625 PAFAH1B1P43034 410 aa21.95■■□□□ 1.11
TBC1D4-201ENST00000377625 TEX13AQ9BXU3 409 aaPredicted RBP21.95■■□□□ 1.11
TBC1D4-201ENST00000377625 TCP11L1Q9NUJ3 509 aa21.95■■□□□ 1.11
TBC1D4-201ENST00000377625 DDX19AQ9NUU7 478 aaKnown RBP21.95■■□□□ 1.11
TBC1D4-201ENST00000377625 LDHCP07864 332 aa21.95■■□□□ 1.1
TBC1D4-201ENST00000377625 GJB2P29033 226 aa21.95■■□□□ 1.1
TBC1D4-201ENST00000377625 GOPCQ9HD26 462 aa21.95■■□□□ 1.1
TBC1D4-201ENST00000377625 IFFO1Q0D2I5 559 aa21.95■■□□□ 1.1
TBC1D4-201ENST00000377625 ATP5J2-PTCD1G3V325 749 aa21.95■■□□□ 1.1
TBC1D4-201ENST00000377625 FEZ1Q99689 392 aa21.95■■□□□ 1.1
TBC1D4-201ENST00000377625 VAT1LQ9HCJ6 419 aa21.94■■□□□ 1.1
TBC1D4-201ENST00000377625 INCENPQ9NQS7 918 aa21.94■■□□□ 1.1
TBC1D4-201ENST00000377625 CD109Q6YHK3 1445 aa21.94■■□□□ 1.1
TBC1D4-201ENST00000377625 MCM3P25205 808 aa21.94■■□□□ 1.1
TBC1D4-201ENST00000377625 AMPD3Q01432 767 aa21.94■■□□□ 1.1
TBC1D4-201ENST00000377625 CETN1Q12798 172 aa21.94■■□□□ 1.1
TBC1D4-201ENST00000377625 IFNL2Q8IZJ0 200 aa21.94■■□□□ 1.1
TBC1D4-201ENST00000377625 TTC21BQ7Z4L5 1316 aa21.94■■□□□ 1.1
TBC1D4-201ENST00000377625 TSPY2A6NKD2 308 aa21.94■■□□□ 1.1
TBC1D4-201ENST00000377625 PDE4BQ07343 736 aa21.94■■□□□ 1.1
TBC1D4-201ENST00000377625 TFIP11Q9UBB9 837 aaKnown RBP21.94■■□□□ 1.1
TBC1D4-201ENST00000377625 SHTN1A0MZ66 631 aa21.94■■□□□ 1.1
TBC1D4-201ENST00000377625 IDEP14735 1019 aa21.94■■□□□ 1.1
TBC1D4-201ENST00000377625 MYCNP04198 464 aaPredicted RBP21.93■■□□□ 1.1
TBC1D4-201ENST00000377625 KAT14Q9H8E8 782 aa21.93■■□□□ 1.1
TBC1D4-201ENST00000377625 ADGRF5Q8IZF2 1346 aa21.93■■□□□ 1.1
TBC1D4-201ENST00000377625 BIN1O00499 593 aa21.93■■□□□ 1.1
TBC1D4-201ENST00000377625 BAG3O95817 575 aa21.93■■□□□ 1.1
TBC1D4-201ENST00000377625 DDX46Q7L014 1031 aaKnown RBP21.93■■□□□ 1.1
TBC1D4-201ENST00000377625 HAND2P61296 217 aa21.93■■□□□ 1.1
TBC1D4-201ENST00000377625 CCDC40Q4G0X9 1142 aa21.93■■□□□ 1.1
TBC1D4-201ENST00000377625 LRPPRCP42704 1394 aaKnown RBP21.93■■□□□ 1.1
TBC1D4-201ENST00000377625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.93■■□□□ 1.1
TBC1D4-201ENST00000377625 TCERG1LQ5VWI1 586 aa21.93■■□□□ 1.1
TBC1D4-201ENST00000377625 UBE3BQ7Z3V4 1068 aa21.93■■□□□ 1.1
TBC1D4-201ENST00000377625 TNPO1Q92973 898 aaKnown RBP21.93■■□□□ 1.1
TBC1D4-201ENST00000377625 MFSD6Q6ZSS7 791 aa21.92■■□□□ 1.1
TBC1D4-201ENST00000377625 TRMT1LQ7Z2T5 733 aaKnown RBP21.92■■□□□ 1.1
TBC1D4-201ENST00000377625 KRT28Q7Z3Y7 464 aa21.92■■□□□ 1.1
TBC1D4-201ENST00000377625 USP25Q9UHP3 1055 aa21.92■■□□□ 1.1
TBC1D4-201ENST00000377625 HOOK3Q86VS8 718 aa21.92■■□□□ 1.1
TBC1D4-201ENST00000377625 MICU3Q86XE3 530 aa21.92■■□□□ 1.1
TBC1D4-201ENST00000377625 MAGI1Q96QZ7 1491 aaPredicted RBP21.92■■□□□ 1.1
TBC1D4-201ENST00000377625 TNNT1P13805 278 aa21.92■■□□□ 1.1
TBC1D4-201ENST00000377625 FBXO31Q5XUX0 539 aaPredicted RBP21.92■■□□□ 1.1
TBC1D4-201ENST00000377625 SPTY2D1Q68D10 685 aaPredicted RBP21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 TBC1D2Q9BYX2 928 aa21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 STX6O43752 255 aa21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 PANK2Q9BZ23 570 aa21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 GDPD2Q9HCC8 539 aa21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 TRMT1Q9NXH9 659 aaKnown RBP21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 ORC3Q9UBD5 711 aaPredicted RBP21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 TMX1Q9H3N1 280 aa21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 CABP5Q9NP86 173 aa21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 CTNNA2P26232 953 aa21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 METAP2P50579 478 aaKnown RBP eCLIP21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 PPP1R42Q7Z4L9 355 aa21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 STX1AQ16623 288 aa21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 NEK1Q96PY6 1258 aa21.91■■□□□ 1.1
TBC1D4-201ENST00000377625 TBC1D9Q6ZT07 1266 aa21.9■■□□□ 1.1
TBC1D4-201ENST00000377625 NCOA7Q8NI08 942 aa21.9■■□□□ 1.1
TBC1D4-201ENST00000377625 PI4KAP2A4QPH2 592 aa21.9■■□□□ 1.1
TBC1D4-201ENST00000377625 PI4KAP1Q8N8J0 262 aa21.9■■□□□ 1.1
TBC1D4-201ENST00000377625 PIK3R4Q99570 1358 aa21.9■■□□□ 1.1
TBC1D4-201ENST00000377625 UBA7P41226 1012 aa21.89■■□□□ 1.1
TBC1D4-201ENST00000377625 SLC4A8Q2Y0W8 1093 aa21.89■■□□□ 1.1
TBC1D4-201ENST00000377625 CAMSAP2Q08AD1 1489 aa21.89■■□□□ 1.1
TBC1D4-201ENST00000377625 TMC6Q7Z403 805 aa21.89■■□□□ 1.1
TBC1D4-201ENST00000377625 KIAA0586Q9BVV6 1533 aa21.89■■□□□ 1.1
TBC1D4-201ENST00000377625 HLA-DOAP06340 250 aa21.89■■□□□ 1.09
TBC1D4-201ENST00000377625 PAXIP1Q6ZW49 1069 aaPredicted RBP21.89■■□□□ 1.09
TBC1D4-201ENST00000377625 ALS2CR12Q96Q35 445 aa21.89■■□□□ 1.09
TBC1D4-201ENST00000377625 GOLGA6L10A0A0M3HER8 536 aa21.89■■□□□ 1.09
TBC1D4-201ENST00000377625 RAB11FIP4Q86YS3 637 aa21.89■■□□□ 1.09
TBC1D4-201ENST00000377625 SLC26A6Q9BXS9 759 aa21.89■■□□□ 1.09
TBC1D4-201ENST00000377625 MBIPQ9NS73 344 aa21.89■■□□□ 1.09
TBC1D4-201ENST00000377625 FAM135AQ9P2D6 1515 aa21.89■■□□□ 1.09
TBC1D4-201ENST00000377625 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
TBC1D4-201ENST00000377625 GCOM1H8Y6P7 765 aaPredicted RBP21.88■■□□□ 1.09
TBC1D4-201ENST00000377625 NEMFO60524 1076 aa21.88■■□□□ 1.09
TBC1D4-201ENST00000377625 MYZAPP0CAP1 466 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms