RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
TNFRSF9-201ENST00000377507 PRAMEF22A3QJZ6 481 aa14.2□□□□□ -0.14
TNFRSF9-201ENST00000377507 GRM8O00222 908 aa14.2□□□□□ -0.14
TNFRSF9-201ENST00000377507 XPCQ01831 940 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF9-201ENST00000377507 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF9-201ENST00000377507 NSFL1CQ9UNZ2 370 aaKnown RBP14.2□□□□□ -0.14
TNFRSF9-201ENST00000377507 DDX58O95786 925 aaKnown RBP14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 CWF19L2Q2TBE0 894 aaKnown RBP14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 LRSAM1Q6UWE0 723 aa14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 CWC27Q6UX04 472 aaKnown RBP14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 KIAA1211Q6ZU35 1233 aa14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 RUFY2Q8WXA3 655 aa14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 ANP32BQ92688 251 aaKnown RBP14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 PDLIM2Q96JY6 352 aa14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 SNRKQ9NRH2 765 aa14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 RBM27Q9P2N5 1060 aaKnown RBP14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 WDR33Q9C0J8 1336 aaKnown RBP14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 C1orf167Q5SNV9 1468 aa14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 OS9Q13438 667 aaPredicted RBP14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 HS1BP3Q53T59 392 aa14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 EVI5LQ96CN4 794 aa14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 TM6SF1Q9BZW5 370 aa14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 PLEKHG2Q9H7P9 1386 aa14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 LIMCH1Q9UPQ0 1083 aa14.19□□□□□ -0.14
TNFRSF9-201ENST00000377507 ABCC6O95255 1503 aa14.18□□□□□ -0.14
TNFRSF9-201ENST00000377507 RPAP1Q9BWH6 1393 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF9-201ENST00000377507 NOL8Q76FK4 1167 aaKnown RBP14.18□□□□□ -0.14
TNFRSF9-201ENST00000377507 TMEM87AQ8NBN3 555 aa14.18□□□□□ -0.14
TNFRSF9-201ENST00000377507 GPATCH3Q96I76 525 aa14.18□□□□□ -0.14
TNFRSF9-201ENST00000377507 SUCLG2Q96I99 432 aa14.18□□□□□ -0.14
TNFRSF9-201ENST00000377507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.18□□□□□ -0.14
TNFRSF9-201ENST00000377507 SASH1O94885 1247 aa14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 IFIT2P09913 472 aaKnown RBP14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 AK2P54819 239 aa14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 ZNF790Q6PG37 636 aa14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 RUFY3Q7L099 469 aa14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 C19orf44Q9H6X5 657 aa14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 PA2G4Q9UQ80 394 aaKnown RBP14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 SPG7Q9UQ90 795 aa14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 ALS2Q96Q42 1657 aa14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 IGKV5-2P06315 115 aa14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 FOXD4L5Q5VV16 416 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 FOXD4L4Q8WXT5 416 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 SLC52A2Q9HAB3 445 aa14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 DIAPH3Q9NSV4 1193 aa14.17□□□□□ -0.14
TNFRSF9-201ENST00000377507 KDM6AO15550 1401 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF9-201ENST00000377507 NPHP3Q7Z494 1330 aa14.16□□□□□ -0.14
TNFRSF9-201ENST00000377507 NECTIN1Q15223 517 aa14.16□□□□□ -0.14
TNFRSF9-201ENST00000377507 VPS53Q5VIR6 699 aa14.16□□□□□ -0.14
TNFRSF9-201ENST00000377507 LARP1Q6PKG0 1096 aaKnown RBP14.16□□□□□ -0.14
TNFRSF9-201ENST00000377507 BICC1Q9H694 974 aaKnown RBP14.16□□□□□ -0.14
TNFRSF9-201ENST00000377507 ZSWIM6Q9HCJ5 1215 aa14.16□□□□□ -0.14
TNFRSF9-201ENST00000377507 SYCE3A1L190 88 aa14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 PTH1RQ03431 593 aa14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 LMOD2Q6P5Q4 547 aa14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 AACSQ86V21 672 aa14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 EAF2Q96CJ1 260 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 RGPD5Q99666 1765 aa14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 SCN11AQ9UI33 1791 aa14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 MRC1P22897 1456 aa14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 HIP1O00291 1037 aa14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 PHKG2P15735 406 aa14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 LRP10Q7Z4F1 713 aa14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 ZSCAN30Q86W11 494 aa14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 PROSER2Q86WR7 435 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF9-201ENST00000377507 G3BP1Q13283 466 aaKnown RBP eCLIP14.14□□□□□ -0.15
TNFRSF9-201ENST00000377507 RAPGEF4Q8WZA2 1011 aa14.14□□□□□ -0.15
TNFRSF9-201ENST00000377507 NEURL1BA8MQ27 555 aa14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 ZSCAN22P10073 491 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 USP48Q86UV5 1035 aa14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 MAP4K1Q92918 833 aa14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 SYAP1Q96A49 352 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 ZSCAN31Q96LW9 406 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 METTL22Q9BUU2 404 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 COL15A1P39059 1388 aa14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 CCDC171Q6TFL3 1326 aa14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 CASTP20810 708 aaKnown RBP14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 SYT1P21579 422 aa14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 GCKRQ14397 625 aa14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 RIC3Q7Z5B4 369 aa14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 KLHL34Q8N239 644 aa14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 SH2B1Q9NRF2 756 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 C5P01031 1676 aa14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 COL18A1P39060 1754 aa14.13□□□□□ -0.15
TNFRSF9-201ENST00000377507 STX6O43752 255 aa14.12□□□□□ -0.15
TNFRSF9-201ENST00000377507 TATP17735 454 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF9-201ENST00000377507 ZC3H6P61129 1189 aaKnown RBP14.12□□□□□ -0.15
TNFRSF9-201ENST00000377507 AIMP1Q12904 312 aaKnown RBP14.12□□□□□ -0.15
TNFRSF9-201ENST00000377507 SLC39A6Q13433 755 aa14.12□□□□□ -0.15
TNFRSF9-201ENST00000377507 ADCK5Q3MIX3 580 aa14.12□□□□□ -0.15
TNFRSF9-201ENST00000377507 NFATC2IPQ8NCF5 419 aa14.12□□□□□ -0.15
TNFRSF9-201ENST00000377507 GADD45BO75293 160 aaPredicted RBP14.11□□□□□ -0.15
TNFRSF9-201ENST00000377507 NEXNQ0ZGT2 675 aa14.11□□□□□ -0.15
TNFRSF9-201ENST00000377507 PRPF40BQ6NWY9 871 aaKnown RBP14.11□□□□□ -0.15
TNFRSF9-201ENST00000377507 COPRSQ9NQ92 184 aa14.11□□□□□ -0.15
TNFRSF9-201ENST00000377507 PDRG1Q9NUG6 133 aa14.11□□□□□ -0.15
TNFRSF9-201ENST00000377507 CYP46A1Q9Y6A2 500 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms