RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 C21orf2O43822 256 aa25.56■■□□□ 1.68
CBWD3-204ENST00000377349 CNBD1Q8NA66 436 aa25.56■■□□□ 1.68
CBWD3-204ENST00000377349 NUP98P52948 1817 aa25.55■■□□□ 1.68
CBWD3-204ENST00000377349 POTECB2RU33 542 aa25.54■■□□□ 1.68
CBWD3-204ENST00000377349 SNRPA1P09661 255 aaKnown RBP25.54■■□□□ 1.68
CBWD3-204ENST00000377349 NBPF26B4DH59 902 aa25.54■■□□□ 1.68
CBWD3-204ENST00000377349 SRGNP10124 158 aa25.54■■□□□ 1.68
CBWD3-204ENST00000377349 NBPF10Q6P3W6 841 aaKnown RBP25.54■■□□□ 1.68
CBWD3-204ENST00000377349 NBPF15Q8N660 670 aa25.54■■□□□ 1.68
CBWD3-204ENST00000377349 SMC1BQ8NDV3 1235 aa25.54■■□□□ 1.68
CBWD3-204ENST00000377349 RTF1Q92541 710 aaKnown RBP25.54■■□□□ 1.68
CBWD3-204ENST00000377349 KLRG1Q96E93 195 aa25.54■■□□□ 1.68
CBWD3-204ENST00000377349 ZNF219Q9P2Y4 722 aaPredicted RBP25.54■■□□□ 1.68
CBWD3-204ENST00000377349 VEGFAP15692 232 aaPredicted RBP25.53■■□□□ 1.68
CBWD3-204ENST00000377349 LTBP3Q9NS15 1303 aa25.52■■□□□ 1.68
CBWD3-204ENST00000377349 HTATSF1O43719 755 aaKnown RBP25.52■■□□□ 1.68
CBWD3-204ENST00000377349 STYK1Q6J9G0 422 aa25.52■■□□□ 1.68
CBWD3-204ENST00000377349 CLEC4GQ6UXB4 293 aa25.52■■□□□ 1.68
CBWD3-204ENST00000377349 NPM2Q86SE8 214 aaKnown RBP25.51■■□□□ 1.67
CBWD3-204ENST00000377349 JMYQ8N9B5 988 aa25.51■■□□□ 1.67
CBWD3-204ENST00000377349 ST5P78524 1137 aa25.5■■□□□ 1.67
CBWD3-204ENST00000377349 PRPF40BQ6NWY9 871 aaKnown RBP25.5■■□□□ 1.67
CBWD3-204ENST00000377349 CNKSR1Q969H4 720 aa25.49■■□□□ 1.67
CBWD3-204ENST00000377349 MASTLQ96GX5 879 aa25.48■■□□□ 1.67
CBWD3-204ENST00000377349 ERFEQ4G0M1 354 aa25.47■■□□□ 1.67
CBWD3-204ENST00000377349 C7orf43Q8WVR3 580 aa25.47■■□□□ 1.67
CBWD3-204ENST00000377349 TAOK3Q9H2K8 898 aa25.47■■□□□ 1.67
CBWD3-204ENST00000377349 KLRG2A4D1S0 409 aaPredicted RBP25.46■■□□□ 1.67
CBWD3-204ENST00000377349 RGL2O15211 777 aa25.46■■□□□ 1.67
CBWD3-204ENST00000377349 TAF7Q15545 349 aaPredicted RBP25.46■■□□□ 1.67
CBWD3-204ENST00000377349 NBPF5PQ86XG9 351 aaPredicted RBP25.46■■□□□ 1.67
CBWD3-204ENST00000377349 MIS18AQ9NYP9 233 aa25.46■■□□□ 1.67
CBWD3-204ENST00000377349 NPHP1O15259 732 aa25.46■■□□□ 1.67
CBWD3-204ENST00000377349 ZNF652Q9Y2D9 606 aa25.46■■□□□ 1.67
CBWD3-204ENST00000377349 SCN4AP35499 1836 aa25.45■■□□□ 1.67
CBWD3-204ENST00000377349 PLEKHF1Q96S99 279 aa25.45■■□□□ 1.66
CBWD3-204ENST00000377349 HLFQ16534 295 aa25.44■■□□□ 1.66
CBWD3-204ENST00000377349 NIP7Q9Y221 180 aaKnown RBP eCLIP25.44■■□□□ 1.66
CBWD3-204ENST00000377349 DPY19L2Q6NUT2 758 aa25.43■■□□□ 1.66
CBWD3-204ENST00000377349 SOGA3Q5TF21 947 aa25.41■■□□□ 1.66
CBWD3-204ENST00000377349 DDNO94850 711 aaPredicted RBP25.4■■□□□ 1.66
CBWD3-204ENST00000377349 NPR1P16066 1061 aa25.4■■□□□ 1.66
CBWD3-204ENST00000377349 TPTE2Q6XPS3 522 aa25.4■■□□□ 1.66
CBWD3-204ENST00000377349 OLFM4Q6UX06 510 aa25.39■■□□□ 1.66
CBWD3-204ENST00000377349 SNED1Q8TER0 1413 aa25.39■■□□□ 1.65
CBWD3-204ENST00000377349 THUMPD2Q9BTF0 503 aaKnown RBP25.38■■□□□ 1.65
CBWD3-204ENST00000377349 ABCC12Q96J65 1359 aa25.38■■□□□ 1.65
CBWD3-204ENST00000377349 POTEIP0CG38 1075 aa25.37■■□□□ 1.65
CBWD3-204ENST00000377349 POTEJP0CG39 1038 aa25.37■■□□□ 1.65
CBWD3-204ENST00000377349 EIF4A1P60842 406 aaKnown RBP25.37■■□□□ 1.65
CBWD3-204ENST00000377349 CCDC93Q567U6 631 aa25.37■■□□□ 1.65
CBWD3-204ENST00000377349 FAM177BA6PVY3 158 aa25.37■■□□□ 1.65
CBWD3-204ENST00000377349 NEFMP07197 916 aa25.37■■□□□ 1.65
CBWD3-204ENST00000377349 NFE2L2Q16236 605 aa25.37■■□□□ 1.65
CBWD3-204ENST00000377349 PNISRQ8TF01 805 aaKnown RBP25.36■■□□□ 1.65
CBWD3-204ENST00000377349 ADAMTSL1Q8N6G6 1762 aa25.35■■□□□ 1.65
CBWD3-204ENST00000377349 DDX10Q13206 875 aaKnown RBP25.35■■□□□ 1.65
CBWD3-204ENST00000377349 FKBP4Q02790 459 aaKnown RBP eCLIP25.34■■□□□ 1.65
CBWD3-204ENST00000377349 CRY2Q49AN0 593 aa25.34■■□□□ 1.65
CBWD3-204ENST00000377349 COL13A1Q5TAT6 717 aaPredicted RBP25.34■■□□□ 1.65
CBWD3-204ENST00000377349 TTLL7Q6ZT98 887 aa25.34■■□□□ 1.65
CBWD3-204ENST00000377349 L3MBTL3Q96JM7 780 aaPredicted RBP25.34■■□□□ 1.65
CBWD3-204ENST00000377349 MAP3K15Q6ZN16 1313 aa25.34■■□□□ 1.65
CBWD3-204ENST00000377349 ERVV-1B6SEH8 477 aa25.33■■□□□ 1.65
CBWD3-204ENST00000377349 CHADLQ6NUI6 762 aa25.33■■□□□ 1.65
CBWD3-204ENST00000377349 NGEFQ8N5V2 710 aa25.33■■□□□ 1.65
CBWD3-204ENST00000377349 ZNF277Q9NRM2 450 aaPredicted RBP25.33■■□□□ 1.65
CBWD3-204ENST00000377349 ZNF541Q9H0D2 1346 aa25.33■■□□□ 1.65
CBWD3-204ENST00000377349 RIC1Q4ADV7 1423 aa25.32■■□□□ 1.64
CBWD3-204ENST00000377349 UBN2Q6ZU65 1347 aa25.31■■□□□ 1.64
CBWD3-204ENST00000377349 NUTM1Q86Y26 1132 aa25.31■■□□□ 1.64
CBWD3-204ENST00000377349 COL4A5P29400 1685 aa25.31■■□□□ 1.64
CBWD3-204ENST00000377349 RRP7AQ9Y3A4 280 aaKnown RBP25.3■■□□□ 1.64
CBWD3-204ENST00000377349 ANKRD36CQ5JPF3 1778 aa25.3■■□□□ 1.64
CBWD3-204ENST00000377349 IBTKQ9P2D0 1353 aaPredicted RBP25.3■■□□□ 1.64
CBWD3-204ENST00000377349 RTKN2Q8IZC4 609 aa25.29■■□□□ 1.64
CBWD3-204ENST00000377349 LAMB2P55268 1798 aa25.29■■□□□ 1.64
CBWD3-204ENST00000377349 MYL6BP14649 208 aa25.29■■□□□ 1.64
CBWD3-204ENST00000377349 ALDH1B1P30837 517 aa25.29■■□□□ 1.64
CBWD3-204ENST00000377349 LRP10Q7Z4F1 713 aa25.29■■□□□ 1.64
CBWD3-204ENST00000377349 TAF1DQ9H5J8 278 aaPredicted RBP25.29■■□□□ 1.64
CBWD3-204ENST00000377349 NYXQ9GZU5 481 aa25.28■■□□□ 1.64
CBWD3-204ENST00000377349 MAPK8IP3Q9UPT6 1336 aa25.27■■□□□ 1.64
CBWD3-204ENST00000377349 IQCA1LA6NCM1 817 aa25.27■■□□□ 1.64
CBWD3-204ENST00000377349 GTF2E1P29083 439 aaPredicted RBP25.27■■□□□ 1.64
CBWD3-204ENST00000377349 ZBTB3Q9H5J0 574 aa25.27■■□□□ 1.64
CBWD3-204ENST00000377349 LTBP1Q14766 1721 aa25.26■■□□□ 1.63
CBWD3-204ENST00000377349 PASKQ96RG2 1323 aa25.26■■□□□ 1.63
CBWD3-204ENST00000377349 FZD9O00144 591 aa25.26■■□□□ 1.63
CBWD3-204ENST00000377349 GPTP24298 496 aa25.26■■□□□ 1.63
CBWD3-204ENST00000377349 IARSP41252 1262 aaKnown RBP25.26■■□□□ 1.63
CBWD3-204ENST00000377349 SUSD4Q5VX71 490 aa25.26■■□□□ 1.63
CBWD3-204ENST00000377349 KIF6Q6ZMV9 814 aa25.26■■□□□ 1.63
CBWD3-204ENST00000377349 SLC51AQ86UW1 340 aa25.26■■□□□ 1.63
CBWD3-204ENST00000377349 ZNF34Q8IZ26 560 aa25.26■■□□□ 1.63
CBWD3-204ENST00000377349 CREBZFQ9NS37 354 aa25.26■■□□□ 1.63
CBWD3-204ENST00000377349 ERBB4Q15303 1308 aa25.25■■□□□ 1.63
CBWD3-204ENST00000377349 HSPA1AP0DMV8 641 aaKnown RBP25.25■■□□□ 1.63
CBWD3-204ENST00000377349 HSPA1BP0DMV9 641 aaKnown RBP25.25■■□□□ 1.63
CBWD3-204ENST00000377349 HOXA10P31260 410 aaPredicted RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms