RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 ST5P78524 1137 aa20.95■□□□□ 0.94
CLSTN1-202ENST00000377298 PIBF1Q8WXW3 757 aa20.95■□□□□ 0.94
CLSTN1-202ENST00000377298 DCAF5Q96JK2 942 aa20.95■□□□□ 0.94
CLSTN1-202ENST00000377298 EYA1Q99502 592 aa20.95■□□□□ 0.94
CLSTN1-202ENST00000377298 UHRF1BP1Q6BDS2 1440 aa20.95■□□□□ 0.94
CLSTN1-202ENST00000377298 LIMCH1Q9UPQ0 1083 aa20.95■□□□□ 0.94
CLSTN1-202ENST00000377298 NEO1Q92859 1461 aa20.94■□□□□ 0.94
CLSTN1-202ENST00000377298 C8orf37Q96NL8 207 aa20.94■□□□□ 0.94
CLSTN1-202ENST00000377298 MEIS3Q99687 375 aa20.94■□□□□ 0.94
CLSTN1-202ENST00000377298 SLC12A7Q9Y666 1083 aa20.94■□□□□ 0.94
CLSTN1-202ENST00000377298 MAP3K5Q99683 1374 aa20.94■□□□□ 0.94
CLSTN1-202ENST00000377298 GRM8O00222 908 aa20.94■□□□□ 0.94
CLSTN1-202ENST00000377298 HOXC9P31274 260 aa20.94■□□□□ 0.94
CLSTN1-202ENST00000377298 SYCP1Q15431 976 aa20.94■□□□□ 0.94
CLSTN1-202ENST00000377298 CEP57L1Q8IYX8 460 aa20.94■□□□□ 0.94
CLSTN1-202ENST00000377298 BAG3O95817 575 aa20.93■□□□□ 0.94
CLSTN1-202ENST00000377298 ZFYVE27Q5T4F4 411 aa20.93■□□□□ 0.94
CLSTN1-202ENST00000377298 WDHD1O75717 1129 aaPredicted RBP20.93■□□□□ 0.94
CLSTN1-202ENST00000377298 TTC22Q5TAA0 569 aa20.93■□□□□ 0.94
CLSTN1-202ENST00000377298 SSBP05455 408 aaKnown RBP eCLIP20.93■□□□□ 0.94
CLSTN1-202ENST00000377298 ACSBG1Q96GR2 724 aa20.93■□□□□ 0.94
CLSTN1-202ENST00000377298 MAP3K19Q56UN5 1328 aa20.93■□□□□ 0.94
CLSTN1-202ENST00000377298 IFIT3O14879 490 aaKnown RBP20.92■□□□□ 0.94
CLSTN1-202ENST00000377298 TNNT3P45378 269 aaPredicted RBP20.92■□□□□ 0.94
CLSTN1-202ENST00000377298 ANKRD44Q8N8A2 993 aa20.92■□□□□ 0.94
CLSTN1-202ENST00000377298 C8orf76Q96K31 380 aa20.92■□□□□ 0.94
CLSTN1-202ENST00000377298 SETDB2Q96T68 719 aa20.92■□□□□ 0.94
CLSTN1-202ENST00000377298 SOS1Q07889 1333 aaPredicted RBP20.92■□□□□ 0.94
CLSTN1-202ENST00000377298 PPFIBP1Q86W92 1011 aa20.92■□□□□ 0.94
CLSTN1-202ENST00000377298 SCAND2PQ9GZW5 306 aaPredicted RBP20.92■□□□□ 0.94
CLSTN1-202ENST00000377298 SNRKQ9NRH2 765 aa20.92■□□□□ 0.94
CLSTN1-202ENST00000377298 CBFA2T2O43439 604 aa20.91■□□□□ 0.94
CLSTN1-202ENST00000377298 LINS1Q8NG48 757 aa20.91■□□□□ 0.94
CLSTN1-202ENST00000377298 TBC1D9Q6ZT07 1266 aa20.91■□□□□ 0.94
CLSTN1-202ENST00000377298 NFATC2IPQ8NCF5 419 aa20.91■□□□□ 0.94
CLSTN1-202ENST00000377298 FERMT3Q86UX7 667 aa20.91■□□□□ 0.94
CLSTN1-202ENST00000377298 ANKRD18AQ8IVF6 992 aa20.91■□□□□ 0.94
CLSTN1-202ENST00000377298 ACBD3Q9H3P7 528 aa20.91■□□□□ 0.94
CLSTN1-202ENST00000377298 LUC7LQ9NQ29 371 aaKnown RBP20.91■□□□□ 0.94
CLSTN1-202ENST00000377298 HMG20BQ9P0W2 317 aa20.91■□□□□ 0.94
CLSTN1-202ENST00000377298 ATP8B2P98198 1209 aa20.9■□□□□ 0.94
CLSTN1-202ENST00000377298 NUCB1Q02818 461 aa20.9■□□□□ 0.94
CLSTN1-202ENST00000377298 SAMD9Q5K651 1589 aa20.9■□□□□ 0.94
CLSTN1-202ENST00000377298 JARID2Q92833 1246 aaPredicted RBP20.9■□□□□ 0.94
CLSTN1-202ENST00000377298 PHAXQ9H814 394 aaKnown RBP20.9■□□□□ 0.94
CLSTN1-202ENST00000377298 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.9■□□□□ 0.942e-6■■■■■ 108.7
CLSTN1-202ENST00000377298 IGHDP01880 384 aa20.9■□□□□ 0.94
CLSTN1-202ENST00000377298 CAGE1Q8TC20 777 aa20.9■□□□□ 0.94
CLSTN1-202ENST00000377298 NLRP3Q96P20 1036 aa20.9■□□□□ 0.94
CLSTN1-202ENST00000377298 ZFYP08048 801 aaPredicted RBP20.89■□□□□ 0.94
CLSTN1-202ENST00000377298 CATIPQ7Z7H3 387 aa20.89■□□□□ 0.94
CLSTN1-202ENST00000377298 RUFY1Q96T51 708 aa20.89■□□□□ 0.94
CLSTN1-202ENST00000377298 PCDH11XQ9BZA7 1347 aa20.89■□□□□ 0.93
CLSTN1-202ENST00000377298 PCDH11YQ9BZA8 1340 aa20.89■□□□□ 0.93
CLSTN1-202ENST00000377298 COL17A1Q9UMD9 1497 aaPredicted RBP20.89■□□□□ 0.93
CLSTN1-202ENST00000377298 IL15P40933 162 aaPredicted RBP20.89■□□□□ 0.93
CLSTN1-202ENST00000377298 EDC4Q6P2E9 1401 aaKnown RBP20.89■□□□□ 0.93
CLSTN1-202ENST00000377298 GOLGA8AA7E2F4 631 aa20.89■□□□□ 0.93
CLSTN1-202ENST00000377298 GOLGA8BA8MQT2 603 aa20.89■□□□□ 0.93
CLSTN1-202ENST00000377298 ZNF219Q9P2Y4 722 aaPredicted RBP20.89■□□□□ 0.93
CLSTN1-202ENST00000377298 LMBR1LQ6UX01 489 aa20.88■□□□□ 0.93
CLSTN1-202ENST00000377298 TANGO6Q9C0B7 1094 aa20.88■□□□□ 0.93
CLSTN1-202ENST00000377298 RDXP35241 583 aaKnown RBP20.88■□□□□ 0.93
CLSTN1-202ENST00000377298 CDR1P51861 262 aa20.88■□□□□ 0.93
CLSTN1-202ENST00000377298 NPC1L1Q9UHC9 1359 aa20.88■□□□□ 0.93
CLSTN1-202ENST00000377298 PDE4BQ07343 736 aa20.88■□□□□ 0.93
CLSTN1-202ENST00000377298 TNIP1Q15025 636 aa20.88■□□□□ 0.93
CLSTN1-202ENST00000377298 TTLL5Q6EMB2 1281 aa20.88■□□□□ 0.93
CLSTN1-202ENST00000377298 VAMP4O75379 141 aa20.87■□□□□ 0.93
CLSTN1-202ENST00000377298 ATP2B3Q16720 1220 aa20.87■□□□□ 0.93
CLSTN1-202ENST00000377298 CCDC96Q2M329 555 aa20.87■□□□□ 0.93
CLSTN1-202ENST00000377298 ZNF622Q969S3 477 aaKnown RBP eCLIP20.87■□□□□ 0.93
CLSTN1-202ENST00000377298 SMTNL1A8MU46 457 aa20.87■□□□□ 0.93
CLSTN1-202ENST00000377298 SKAP1Q86WV1 359 aa20.87■□□□□ 0.93
CLSTN1-202ENST00000377298 LMTK3Q96Q04 1460 aa20.87■□□□□ 0.93
CLSTN1-202ENST00000377298 GSTO1P78417 241 aa20.87■□□□□ 0.93
CLSTN1-202ENST00000377298 SSRP1Q08945 709 aaKnown RBP20.87■□□□□ 0.93
CLSTN1-202ENST00000377298 MAP3K11Q16584 847 aa20.87■□□□□ 0.93
CLSTN1-202ENST00000377298 PER1O15534 1290 aaPredicted RBP20.87■□□□□ 0.93
CLSTN1-202ENST00000377298 TXLNBQ8N3L3 684 aa20.87■□□□□ 0.93
CLSTN1-202ENST00000377298 PHACTR3Q96KR7 559 aa20.86■□□□□ 0.93
CLSTN1-202ENST00000377298 RNMTO43148 476 aaKnown RBP20.86■□□□□ 0.93
CLSTN1-202ENST00000377298 SIRT1Q96EB6 747 aa20.86■□□□□ 0.93
CLSTN1-202ENST00000377298 NIP7Q9Y221 180 aaKnown RBP eCLIP20.86■□□□□ 0.93
CLSTN1-202ENST00000377298 PAF1Q8N7H5 531 aa20.86■□□□□ 0.93
CLSTN1-202ENST00000377298 UTP14AQ9BVJ6 771 aaKnown RBP20.86■□□□□ 0.93
CLSTN1-202ENST00000377298 CDCA7Q9BWT1 371 aaPredicted RBP20.86■□□□□ 0.93
CLSTN1-202ENST00000377298 NYXQ9GZU5 481 aa20.86■□□□□ 0.93
CLSTN1-202ENST00000377298 DZIP3Q86Y13 1208 aaKnown RBP20.85■□□□□ 0.93
CLSTN1-202ENST00000377298 SPC24Q8NBT2 197 aa20.85■□□□□ 0.93
CLSTN1-202ENST00000377298 PDCL3Q9H2J4 239 aa20.85■□□□□ 0.93
CLSTN1-202ENST00000377298 SBNO1A3KN83 1393 aa20.85■□□□□ 0.93
CLSTN1-202ENST00000377298 KIF5BP33176 963 aa20.85■□□□□ 0.93
CLSTN1-202ENST00000377298 MFSD6Q6ZSS7 791 aa20.85■□□□□ 0.93
CLSTN1-202ENST00000377298 NCOA7Q8NI08 942 aa20.85■□□□□ 0.93
CLSTN1-202ENST00000377298 NEK1Q96PY6 1258 aa20.85■□□□□ 0.93
CLSTN1-202ENST00000377298 ZGPATQ8N5A5 531 aaKnown RBP20.84■□□□□ 0.93
CLSTN1-202ENST00000377298 CRNKL1Q9BZJ0 848 aaKnown RBP20.84■□□□□ 0.93
CLSTN1-202ENST00000377298 TEX35Q5T0J7 233 aa20.84■□□□□ 0.93
CLSTN1-202ENST00000377298 RAB34Q9BZG1 259 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms