RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 TTLL7Q6ZT98 887 aa25.65■■□□□ 1.7
DDR1-228ENST00000376575 HYPKQ9NX55 129 aa25.65■■□□□ 1.7
DDR1-228ENST00000376575 MAP3K15Q6ZN16 1313 aa25.63■■□□□ 1.69
DDR1-228ENST00000376575 COPS6Q7L5N1 327 aa25.63■■□□□ 1.69
DDR1-228ENST00000376575 XAGE3Q8WTP9 111 aa25.62■■□□□ 1.69
DDR1-228ENST00000376575 NUP98P52948 1817 aa25.61■■□□□ 1.69
DDR1-228ENST00000376575 POLD1P28340 1107 aa25.61■■□□□ 1.69
DDR1-228ENST00000376575 MMP10P09238 476 aa25.6■■□□□ 1.69
DDR1-228ENST00000376575 CT47B1P0C2W7 299 aaPredicted RBP25.6■■□□□ 1.69
DDR1-228ENST00000376575 NFIXQ14938 502 aa25.6■■□□□ 1.69
DDR1-228ENST00000376575 HLFQ16534 295 aa25.6■■□□□ 1.69
DDR1-228ENST00000376575 ZNF428Q96B54 188 aa25.6■■□□□ 1.69
DDR1-228ENST00000376575 DDR1Q08345 913 aa25.59■■□□□ 1.69
DDR1-228ENST00000376575 KIF6Q6ZMV9 814 aa25.59■■□□□ 1.69
DDR1-228ENST00000376575 PHAXQ9H814 394 aaKnown RBP25.59■■□□□ 1.69
DDR1-228ENST00000376575 TBC1D9BQ66K14 1250 aa25.58■■□□□ 1.69
DDR1-228ENST00000376575 ARXQ96QS3 562 aa25.58■■□□□ 1.69
DDR1-228ENST00000376575 STK31Q9BXU1 1019 aa25.58■■□□□ 1.69
DDR1-228ENST00000376575 ZNF652Q9Y2D9 606 aa25.58■■□□□ 1.69
DDR1-228ENST00000376575 POLRMTO00411 1230 aaKnown RBP25.57■■□□□ 1.68
DDR1-228ENST00000376575 SLC4A2P04920 1241 aa25.57■■□□□ 1.68
DDR1-228ENST00000376575 GIGYF2Q6Y7W6 1299 aaKnown RBP25.57■■□□□ 1.68
DDR1-228ENST00000376575 NRXN2Q9P2S2 1712 aa25.57■■□□□ 1.68
DDR1-228ENST00000376575 ATP10DQ9P241 1426 aa25.56■■□□□ 1.68
DDR1-228ENST00000376575 TCERG1O14776 1098 aaKnown RBP25.56■■□□□ 1.68
DDR1-228ENST00000376575 AIMP1Q12904 312 aaKnown RBP25.56■■□□□ 1.68
DDR1-228ENST00000376575 PLBD2Q8NHP8 589 aa25.56■■□□□ 1.68
DDR1-228ENST00000376575 ANKRD13DQ6ZTN6 518 aa25.55■■□□□ 1.68
DDR1-228ENST00000376575 ZBTB3Q9H5J0 574 aa25.55■■□□□ 1.68
DDR1-228ENST00000376575 G2E3Q7L622 706 aa25.54■■□□□ 1.68
DDR1-228ENST00000376575 AFDNP55196 1824 aaKnown RBP25.53■■□□□ 1.68
DDR1-228ENST00000376575 ZNF34Q8IZ26 560 aa25.53■■□□□ 1.68
DDR1-228ENST00000376575 PARP3Q9Y6F1 533 aa25.53■■□□□ 1.68
DDR1-228ENST00000376575 KIF13BQ9NQT8 1826 aa25.52■■□□□ 1.68
DDR1-228ENST00000376575 ALDH1L2Q3SY69 923 aa25.52■■□□□ 1.68
DDR1-228ENST00000376575 SETDB2Q96T68 719 aa25.52■■□□□ 1.68
DDR1-228ENST00000376575 CARMIL3Q8ND23 1372 aa25.52■■□□□ 1.68
DDR1-228ENST00000376575 ANKRD36CQ5JPF3 1778 aa25.51■■□□□ 1.67
DDR1-228ENST00000376575 ARFGEF2Q9Y6D5 1785 aa25.51■■□□□ 1.67
DDR1-228ENST00000376575 FLIIQ13045 1269 aa25.51■■□□□ 1.67
DDR1-228ENST00000376575 SSH1Q8WYL5 1049 aa25.51■■□□□ 1.67
DDR1-228ENST00000376575 SERPINB2P05120 415 aa25.5■■□□□ 1.67
DDR1-228ENST00000376575 BRPF1P55201 1214 aaPredicted RBP25.5■■□□□ 1.67
DDR1-228ENST00000376575 TCIRG1Q13488 830 aa25.5■■□□□ 1.67
DDR1-228ENST00000376575 BICDL1Q6ZP65 573 aa25.5■■□□□ 1.67
DDR1-228ENST00000376575 MRPL50Q8N5N7 158 aaKnown RBP25.5■■□□□ 1.67
DDR1-228ENST00000376575 NIP7Q9Y221 180 aaKnown RBP eCLIP25.5■■□□□ 1.67
DDR1-228ENST00000376575 C10orf71Q711Q0 1435 aa25.49■■□□□ 1.67
DDR1-228ENST00000376575 UBN2Q6ZU65 1347 aa25.49■■□□□ 1.67
DDR1-228ENST00000376575 HSP90AB3PQ58FF7 597 aa25.49■■□□□ 1.67
DDR1-228ENST00000376575 ADCY9O60503 1353 aa25.48■■□□□ 1.67
DDR1-228ENST00000376575 DDX58O95786 925 aaKnown RBP25.48■■□□□ 1.67
DDR1-228ENST00000376575 KSR2Q6VAB6 950 aa25.48■■□□□ 1.67
DDR1-228ENST00000376575 PPP1R1BQ9UD71 204 aaPredicted RBP25.48■■□□□ 1.67
DDR1-228ENST00000376575 CD2APQ9Y5K6 639 aa25.48■■□□□ 1.67
DDR1-228ENST00000376575 IBTKQ9P2D0 1353 aaPredicted RBP25.47■■□□□ 1.67
DDR1-228ENST00000376575 ISCA1Q9BUE6 129 aa25.47■■□□□ 1.67
DDR1-228ENST00000376575 FHDC1Q9C0D6 1143 aaPredicted RBP25.47■■□□□ 1.67
DDR1-228ENST00000376575 RARSP54136 660 aaKnown RBP25.46■■□□□ 1.67
DDR1-228ENST00000376575 TRIM28Q13263 835 aaKnown RBP25.46■■□□□ 1.67
DDR1-228ENST00000376575 PI4KAP2A4QPH2 592 aa25.45■■□□□ 1.66
DDR1-228ENST00000376575 RIC3Q7Z5B4 369 aa25.45■■□□□ 1.66
DDR1-228ENST00000376575 PI4KAP1Q8N8J0 262 aa25.45■■□□□ 1.66
DDR1-228ENST00000376575 SYT17Q9BSW7 474 aa25.45■■□□□ 1.66
DDR1-228ENST00000376575 METTL22Q9BUU2 404 aaPredicted RBP25.45■■□□□ 1.66
DDR1-228ENST00000376575 PARP10Q53GL7 1025 aa25.44■■□□□ 1.66
DDR1-228ENST00000376575 PRR5LQ6MZQ0 368 aa25.44■■□□□ 1.66
DDR1-228ENST00000376575 MAP3K2Q9Y2U5 619 aa25.44■■□□□ 1.66
DDR1-228ENST00000376575 GPTP24298 496 aa25.43■■□□□ 1.66
DDR1-228ENST00000376575 SUSD4Q5VX71 490 aa25.43■■□□□ 1.66
DDR1-228ENST00000376575 NLRP10Q86W26 655 aa25.43■■□□□ 1.66
DDR1-228ENST00000376575 KIAA1551Q9HCM1 1747 aa25.43■■□□□ 1.66
DDR1-228ENST00000376575 FKBP5Q13451 457 aaPredicted RBP25.42■■□□□ 1.66
DDR1-228ENST00000376575 NTSR2O95665 410 aa25.41■■□□□ 1.66
DDR1-228ENST00000376575 TPTE2Q6XPS3 522 aa25.41■■□□□ 1.66
DDR1-228ENST00000376575 NBPF5PQ86XG9 351 aaPredicted RBP25.41■■□□□ 1.66
DDR1-228ENST00000376575 BCL2L13Q9BXK5 485 aa25.41■■□□□ 1.66
DDR1-228ENST00000376575 ANKRD31Q8N7Z5 1873 aa25.4■■□□□ 1.66
DDR1-228ENST00000376575 PTPRCP08575 1304 aa25.4■■□□□ 1.66
DDR1-228ENST00000376575 CNBD1Q8NA66 436 aa25.4■■□□□ 1.66
DDR1-228ENST00000376575 NYXQ9GZU5 481 aa25.4■■□□□ 1.66
DDR1-228ENST00000376575 SMC4Q9NTJ3 1288 aa25.4■■□□□ 1.66
DDR1-228ENST00000376575 IGKV5-2P06315 115 aa25.39■■□□□ 1.66
DDR1-228ENST00000376575 TGFB2P61812 414 aa25.39■■□□□ 1.66
DDR1-228ENST00000376575 DNAAF4Q8WXU2 420 aa25.39■■□□□ 1.66
DDR1-228ENST00000376575 RNF123Q5XPI4 1314 aa25.38■■□□□ 1.65
DDR1-228ENST00000376575 ATP5J2-PTCD1G3V325 749 aa25.38■■□□□ 1.65
DDR1-228ENST00000376575 PPP1R42Q7Z4L9 355 aa25.38■■□□□ 1.65
DDR1-228ENST00000376575 NLGN2Q8NFZ4 835 aa25.38■■□□□ 1.65
DDR1-228ENST00000376575 MYD88Q99836 296 aa25.38■■□□□ 1.65
DDR1-228ENST00000376575 BRIP1Q9BX63 1249 aa25.38■■□□□ 1.65
DDR1-228ENST00000376575 PXDNLA1KZ92 1463 aa25.37■■□□□ 1.65
DDR1-228ENST00000376575 KLRG2A4D1S0 409 aaPredicted RBP25.37■■□□□ 1.65
DDR1-228ENST00000376575 CCDC191Q8NCU4 936 aa25.37■■□□□ 1.65
DDR1-228ENST00000376575 YTHDC1Q96MU7 727 aaKnown RBP25.37■■□□□ 1.65
DDR1-228ENST00000376575 UTP14AQ9BVJ6 771 aaKnown RBP25.37■■□□□ 1.65
DDR1-228ENST00000376575 RIC1Q4ADV7 1423 aa25.37■■□□□ 1.65
DDR1-228ENST00000376575 F6X3S4 739 aa25.36■■□□□ 1.65
DDR1-228ENST00000376575 SLC10A5Q5PT55 438 aa25.36■■□□□ 1.65
DDR1-228ENST00000376575 ST5P78524 1137 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms