RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 TEX13AQ9BXU3 409 aaPredicted RBP17.66■□□□□ 0.42
CLCN6-205ENST00000376492 CREBZFQ9NS37 354 aa17.66■□□□□ 0.42
CLCN6-205ENST00000376492 SIPA1L3O60292 1781 aaPredicted RBP17.66■□□□□ 0.42
CLCN6-205ENST00000376492 ST5P78524 1137 aa17.65■□□□□ 0.42
CLCN6-205ENST00000376492 STYK1Q6J9G0 422 aa17.65■□□□□ 0.42
CLCN6-205ENST00000376492 CNKSR1Q969H4 720 aa17.65■□□□□ 0.42
CLCN6-205ENST00000376492 SLX4Q8IY92 1834 aa17.65■□□□□ 0.42
CLCN6-205ENST00000376492 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
CLCN6-205ENST00000376492 DZIP3Q86Y13 1208 aaKnown RBP17.64■□□□□ 0.41
CLCN6-205ENST00000376492 MASTLQ96GX5 879 aa17.64■□□□□ 0.41
CLCN6-205ENST00000376492 PRAMEF22A3QJZ6 481 aa17.63■□□□□ 0.41
CLCN6-205ENST00000376492 BCORQ6W2J9 1755 aa17.63■□□□□ 0.41
CLCN6-205ENST00000376492 DICER1Q9UPY3 1922 aaKnown RBP17.62■□□□□ 0.41
CLCN6-205ENST00000376492 BTBD11A6QL63 1104 aa17.62■□□□□ 0.41
CLCN6-205ENST00000376492 NPM2Q86SE8 214 aaKnown RBP17.62■□□□□ 0.41
CLCN6-205ENST00000376492 PHACTR3Q96KR7 559 aa17.62■□□□□ 0.41
CLCN6-205ENST00000376492 USP16Q9Y5T5 823 aa17.62■□□□□ 0.41
CLCN6-205ENST00000376492 SOGA3Q5TF21 947 aa17.61■□□□□ 0.41
CLCN6-205ENST00000376492 OLFM4Q6UX06 510 aa17.61■□□□□ 0.41
CLCN6-205ENST00000376492 NBPF5PQ86XG9 351 aaPredicted RBP17.61■□□□□ 0.41
CLCN6-205ENST00000376492 C7orf43Q8WVR3 580 aa17.61■□□□□ 0.41
CLCN6-205ENST00000376492 PASKQ96RG2 1323 aa17.61■□□□□ 0.41
CLCN6-205ENST00000376492 ZNF541Q9H0D2 1346 aa17.61■□□□□ 0.41
CLCN6-205ENST00000376492 CNTNAP1P78357 1384 aa17.61■□□□□ 0.41
CLCN6-205ENST00000376492 CACNA1SQ13698 1873 aa17.61■□□□□ 0.41
CLCN6-205ENST00000376492 FOXN1O15353 648 aa17.6■□□□□ 0.41
CLCN6-205ENST00000376492 PRKAR2BP31323 418 aa17.6■□□□□ 0.41
CLCN6-205ENST00000376492 LDHDQ86WU2 507 aa17.6■□□□□ 0.41
CLCN6-205ENST00000376492 L3MBTL3Q96JM7 780 aaPredicted RBP17.6■□□□□ 0.41
CLCN6-205ENST00000376492 TAF1DQ9H5J8 278 aaPredicted RBP17.6■□□□□ 0.41
CLCN6-205ENST00000376492 ARFGEF2Q9Y6D5 1785 aa17.59■□□□□ 0.41
CLCN6-205ENST00000376492 IQCA1LA6NCM1 817 aa17.59■□□□□ 0.41
CLCN6-205ENST00000376492 CCDC93Q567U6 631 aa17.59■□□□□ 0.41
CLCN6-205ENST00000376492 ZNF277Q9NRM2 450 aaPredicted RBP17.59■□□□□ 0.41
CLCN6-205ENST00000376492 NPC1L1Q9UHC9 1359 aa17.58■□□□□ 0.4
CLCN6-205ENST00000376492 RSPH6AQ9H0K4 717 aa17.58■□□□□ 0.4
CLCN6-205ENST00000376492 NPR1P16066 1061 aa17.57■□□□□ 0.4
CLCN6-205ENST00000376492 FKBP4Q02790 459 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLCN6-205ENST00000376492 EAPPQ56P03 285 aaPredicted RBP17.57■□□□□ 0.4
CLCN6-205ENST00000376492 FAM177BA6PVY3 158 aa17.56■□□□□ 0.4
CLCN6-205ENST00000376492 VEGFBP49765 207 aa17.56■□□□□ 0.4
CLCN6-205ENST00000376492 CLEC4GQ6UXB4 293 aa17.56■□□□□ 0.4
CLCN6-205ENST00000376492 MCM10Q7L590 875 aa17.56■□□□□ 0.4
CLCN6-205ENST00000376492 ZNF652Q9Y2D9 606 aa17.56■□□□□ 0.4
CLCN6-205ENST00000376492 KLRG2A4D1S0 409 aaPredicted RBP17.55■□□□□ 0.4
CLCN6-205ENST00000376492 NBPF26B4DH59 902 aa17.55■□□□□ 0.4
CLCN6-205ENST00000376492 ITGBL1O95965 494 aaPredicted RBP17.55■□□□□ 0.4
CLCN6-205ENST00000376492 SNRPA1P09661 255 aaKnown RBP17.55■□□□□ 0.4
CLCN6-205ENST00000376492 NBPF10Q6P3W6 841 aaKnown RBP17.55■□□□□ 0.4
CLCN6-205ENST00000376492 NBPF15Q8N660 670 aa17.55■□□□□ 0.4
CLCN6-205ENST00000376492 NIP7Q9Y221 180 aaKnown RBP eCLIP17.55■□□□□ 0.4
CLCN6-205ENST00000376492 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
CLCN6-205ENST00000376492 TMEM88BA6NKF7 163 aa17.54■□□□□ 0.4
CLCN6-205ENST00000376492 HACL1Q9UJ83 578 aa17.54■□□□□ 0.4
CLCN6-205ENST00000376492 EPHX2P34913 555 aa17.53■□□□□ 0.4
CLCN6-205ENST00000376492 DCTN1Q14203 1278 aa17.53■□□□□ 0.4
CLCN6-205ENST00000376492 TPTE2Q6XPS3 522 aa17.53■□□□□ 0.4
CLCN6-205ENST00000376492 CLEC11AQ9Y240 323 aa17.53■□□□□ 0.4
CLCN6-205ENST00000376492 SCN4AP35499 1836 aa17.53■□□□□ 0.4
CLCN6-205ENST00000376492 ADAMTSL1Q8N6G6 1762 aa17.53■□□□□ 0.4
CLCN6-205ENST00000376492 HLFQ16534 295 aa17.52■□□□□ 0.4
CLCN6-205ENST00000376492 MAP1SQ66K74 1059 aaPredicted RBP17.52■□□□□ 0.4
CLCN6-205ENST00000376492 AIDAQ96BJ3 306 aa17.52■□□□□ 0.4
CLCN6-205ENST00000376492 PRDM10Q9NQV6 1147 aa17.52■□□□□ 0.4
CLCN6-205ENST00000376492 ABCC12Q96J65 1359 aa17.52■□□□□ 0.39
CLCN6-205ENST00000376492 IARSP41252 1262 aaKnown RBP17.51■□□□□ 0.39
CLCN6-205ENST00000376492 CTCFP49711 727 aaPredicted RBP17.51■□□□□ 0.39
CLCN6-205ENST00000376492 RTKN2Q8IZC4 609 aa17.51■□□□□ 0.39
CLCN6-205ENST00000376492 SYNE4Q8N205 404 aa17.51■□□□□ 0.39
CLCN6-205ENST00000376492 SNED1Q8TER0 1413 aa17.51■□□□□ 0.39
CLCN6-205ENST00000376492 RTF1Q92541 710 aaKnown RBP17.51■□□□□ 0.39
CLCN6-205ENST00000376492 FZD9O00144 591 aa17.5■□□□□ 0.39
CLCN6-205ENST00000376492 SLC51AQ86UW1 340 aa17.5■□□□□ 0.39
CLCN6-205ENST00000376492 CFAP53Q96M91 514 aa17.5■□□□□ 0.39
CLCN6-205ENST00000376492 COL4A5P29400 1685 aa17.49■□□□□ 0.39
CLCN6-205ENST00000376492 U2AF1L5P0DN76 240 aaPredicted RBP17.49■□□□□ 0.39
CLCN6-205ENST00000376492 LBX1P52954 281 aa17.49■□□□□ 0.39
CLCN6-205ENST00000376492 U2AF1Q01081 240 aaKnown RBP eCLIP17.49■□□□□ 0.39
CLCN6-205ENST00000376492 CNTROBQ8N137 903 aa17.49■□□□□ 0.39
CLCN6-205ENST00000376492 WBP1LQ9NX94 342 aa17.49■□□□□ 0.39
CLCN6-205ENST00000376492 RASSF10A6NK89 507 aa17.48■□□□□ 0.39
CLCN6-205ENST00000376492 RGL2O15211 777 aa17.48■□□□□ 0.39
CLCN6-205ENST00000376492 NUTM1Q86Y26 1132 aa17.48■□□□□ 0.39
CLCN6-205ENST00000376492 MIS18AQ9NYP9 233 aa17.48■□□□□ 0.39
CLCN6-205ENST00000376492 GTF2E1P29083 439 aaPredicted RBP17.47■□□□□ 0.39
CLCN6-205ENST00000376492 ALDH1B1P30837 517 aa17.47■□□□□ 0.39
CLCN6-205ENST00000376492 PNMA8AQ86V59 439 aaPredicted RBP17.47■□□□□ 0.39
CLCN6-205ENST00000376492 GPC2Q8N158 579 aa17.47■□□□□ 0.39
CLCN6-205ENST00000376492 NGEFQ8N5V2 710 aa17.47■□□□□ 0.39
CLCN6-205ENST00000376492 NUDCQ9Y266 331 aa17.47■□□□□ 0.39
CLCN6-205ENST00000376492 CRY2Q49AN0 593 aa17.46■□□□□ 0.39
CLCN6-205ENST00000376492 PSMD1Q99460 953 aa17.46■□□□□ 0.39
CLCN6-205ENST00000376492 GJA3Q9Y6H8 435 aa17.46■□□□□ 0.39
CLCN6-205ENST00000376492 LTBP1Q14766 1721 aa17.45■□□□□ 0.38
CLCN6-205ENST00000376492 HSPA8P11142 646 aaKnown RBP17.45■□□□□ 0.38
CLCN6-205ENST00000376492 FMR1Q06787 632 aaKnown RBP eCLIP17.45■□□□□ 0.38
CLCN6-205ENST00000376492 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
CLCN6-205ENST00000376492 JDP2Q8WYK2 163 aa17.45■□□□□ 0.38
CLCN6-205ENST00000376492 ABT1Q9ULW3 272 aaKnown RBP17.45■□□□□ 0.38
CLCN6-205ENST00000376492 PPP2R1AP30153 589 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms