RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 CNBD1Q8NA66 436 aa19.93■□□□□ 0.78
CLCN6-204ENST00000376491 ZNF219Q9P2Y4 722 aaPredicted RBP19.93■□□□□ 0.78
CLCN6-204ENST00000376491 NBPF26B4DH59 902 aa19.92■□□□□ 0.78
CLCN6-204ENST00000376491 HTATSF1O43719 755 aaKnown RBP19.92■□□□□ 0.78
CLCN6-204ENST00000376491 NBPF10Q6P3W6 841 aaKnown RBP19.92■□□□□ 0.78
CLCN6-204ENST00000376491 NBPF15Q8N660 670 aa19.92■□□□□ 0.78
CLCN6-204ENST00000376491 ARFGEF2Q9Y6D5 1785 aa19.91■□□□□ 0.78
CLCN6-204ENST00000376491 SRGNP10124 158 aa19.91■□□□□ 0.78
CLCN6-204ENST00000376491 POTECB2RU33 542 aa19.9■□□□□ 0.78
CLCN6-204ENST00000376491 VEGFAP15692 232 aaPredicted RBP19.9■□□□□ 0.78
CLCN6-204ENST00000376491 ST5P78524 1137 aa19.9■□□□□ 0.78
CLCN6-204ENST00000376491 CLEC4GQ6UXB4 293 aa19.9■□□□□ 0.78
CLCN6-204ENST00000376491 SMC1BQ8NDV3 1235 aa19.9■□□□□ 0.78
CLCN6-204ENST00000376491 MIS18AQ9NYP9 233 aa19.9■□□□□ 0.78
CLCN6-204ENST00000376491 NPHP1O15259 732 aa19.89■□□□□ 0.77
CLCN6-204ENST00000376491 TAF7Q15545 349 aaPredicted RBP19.89■□□□□ 0.77
CLCN6-204ENST00000376491 STYK1Q6J9G0 422 aa19.89■□□□□ 0.77
CLCN6-204ENST00000376491 CNKSR1Q969H4 720 aa19.89■□□□□ 0.77
CLCN6-204ENST00000376491 PRPF40BQ6NWY9 871 aaKnown RBP19.88■□□□□ 0.77
CLCN6-204ENST00000376491 KLRG1Q96E93 195 aa19.88■□□□□ 0.77
CLCN6-204ENST00000376491 MASTLQ96GX5 879 aa19.88■□□□□ 0.77
CLCN6-204ENST00000376491 LAMB4A4D0S4 1761 aa19.88■□□□□ 0.77
CLCN6-204ENST00000376491 LTBP3Q9NS15 1303 aa19.87■□□□□ 0.77
CLCN6-204ENST00000376491 ERFEQ4G0M1 354 aa19.87■□□□□ 0.77
CLCN6-204ENST00000376491 NBPF5PQ86XG9 351 aaPredicted RBP19.87■□□□□ 0.77
CLCN6-204ENST00000376491 KDM3BQ7LBC6 1761 aa19.87■□□□□ 0.77
CLCN6-204ENST00000376491 PLEKHF1Q96S99 279 aa19.86■□□□□ 0.77
CLCN6-204ENST00000376491 TAOK3Q9H2K8 898 aa19.86■□□□□ 0.77
CLCN6-204ENST00000376491 ZNF652Q9Y2D9 606 aa19.86■□□□□ 0.77
CLCN6-204ENST00000376491 HLFQ16534 295 aa19.85■□□□□ 0.77
CLCN6-204ENST00000376491 DPY19L2Q6NUT2 758 aa19.85■□□□□ 0.77
CLCN6-204ENST00000376491 C7orf43Q8WVR3 580 aa19.85■□□□□ 0.77
CLCN6-204ENST00000376491 NIP7Q9Y221 180 aaKnown RBP eCLIP19.85■□□□□ 0.77
CLCN6-204ENST00000376491 KLRG2A4D1S0 409 aaPredicted RBP19.84■□□□□ 0.77
CLCN6-204ENST00000376491 RGL2O15211 777 aa19.84■□□□□ 0.77
CLCN6-204ENST00000376491 JMYQ8N9B5 988 aa19.84■□□□□ 0.77
CLCN6-204ENST00000376491 FAM177BA6PVY3 158 aa19.83■□□□□ 0.77
CLCN6-204ENST00000376491 THUMPD2Q9BTF0 503 aaKnown RBP19.83■□□□□ 0.77
CLCN6-204ENST00000376491 NUP98P52948 1817 aa19.83■□□□□ 0.76
CLCN6-204ENST00000376491 NPR1P16066 1061 aa19.82■□□□□ 0.76
CLCN6-204ENST00000376491 TPTE2Q6XPS3 522 aa19.82■□□□□ 0.76
CLCN6-204ENST00000376491 DDNO94850 711 aaPredicted RBP19.81■□□□□ 0.76
CLCN6-204ENST00000376491 EIF4A1P60842 406 aaKnown RBP19.81■□□□□ 0.76
CLCN6-204ENST00000376491 SOGA3Q5TF21 947 aa19.81■□□□□ 0.76
CLCN6-204ENST00000376491 PNISRQ8TF01 805 aaKnown RBP19.81■□□□□ 0.76
CLCN6-204ENST00000376491 NEFMP07197 916 aa19.8■□□□□ 0.76
CLCN6-204ENST00000376491 NFE2L2Q16236 605 aa19.8■□□□□ 0.76
CLCN6-204ENST00000376491 OLFM4Q6UX06 510 aa19.8■□□□□ 0.76
CLCN6-204ENST00000376491 NGEFQ8N5V2 710 aa19.8■□□□□ 0.76
CLCN6-204ENST00000376491 CCDC93Q567U6 631 aa19.79■□□□□ 0.76
CLCN6-204ENST00000376491 TTLL7Q6ZT98 887 aa19.78■□□□□ 0.76
CLCN6-204ENST00000376491 ERVV-1B6SEH8 477 aa19.77■□□□□ 0.76
CLCN6-204ENST00000376491 POTEIP0CG38 1075 aa19.77■□□□□ 0.76
CLCN6-204ENST00000376491 POTEJP0CG39 1038 aa19.77■□□□□ 0.76
CLCN6-204ENST00000376491 RRP7AQ9Y3A4 280 aaKnown RBP19.77■□□□□ 0.76
CLCN6-204ENST00000376491 ABCC12Q96J65 1359 aa19.77■□□□□ 0.76
CLCN6-204ENST00000376491 MAP3K15Q6ZN16 1313 aa19.76■□□□□ 0.75
CLCN6-204ENST00000376491 FKBP4Q02790 459 aaKnown RBP eCLIP19.76■□□□□ 0.75
CLCN6-204ENST00000376491 NUTM1Q86Y26 1132 aa19.76■□□□□ 0.75
CLCN6-204ENST00000376491 MYL6BP14649 208 aa19.75■□□□□ 0.75
CLCN6-204ENST00000376491 ZNF277Q9NRM2 450 aaPredicted RBP19.75■□□□□ 0.75
CLCN6-204ENST00000376491 SCN4AP35499 1836 aa19.74■□□□□ 0.75
CLCN6-204ENST00000376491 GTF2E1P29083 439 aaPredicted RBP19.74■□□□□ 0.75
CLCN6-204ENST00000376491 UBN2Q6ZU65 1347 aa19.74■□□□□ 0.75
CLCN6-204ENST00000376491 MAPK8IP3Q9UPT6 1336 aa19.74■□□□□ 0.75
CLCN6-204ENST00000376491 GPTP24298 496 aa19.73■□□□□ 0.75
CLCN6-204ENST00000376491 ALDH1B1P30837 517 aa19.73■□□□□ 0.75
CLCN6-204ENST00000376491 CRY2Q49AN0 593 aa19.73■□□□□ 0.75
CLCN6-204ENST00000376491 CHADLQ6NUI6 762 aa19.73■□□□□ 0.75
CLCN6-204ENST00000376491 L3MBTL3Q96JM7 780 aaPredicted RBP19.73■□□□□ 0.75
CLCN6-204ENST00000376491 PNNQ9H307 717 aaKnown RBP19.73■□□□□ 0.75
CLCN6-204ENST00000376491 ZBTB3Q9H5J0 574 aa19.73■□□□□ 0.75
CLCN6-204ENST00000376491 SNED1Q8TER0 1413 aa19.73■□□□□ 0.75
CLCN6-204ENST00000376491 ZNF541Q9H0D2 1346 aa19.73■□□□□ 0.75
CLCN6-204ENST00000376491 SUSD4Q5VX71 490 aa19.72■□□□□ 0.75
CLCN6-204ENST00000376491 KIF6Q6ZMV9 814 aa19.72■□□□□ 0.75
CLCN6-204ENST00000376491 RTKN2Q8IZC4 609 aa19.72■□□□□ 0.75
CLCN6-204ENST00000376491 NYXQ9GZU5 481 aa19.72■□□□□ 0.75
CLCN6-204ENST00000376491 PCNTO95613 3336 aa19.71■□□□□ 0.75
CLCN6-204ENST00000376491 COL13A1Q5TAT6 717 aaPredicted RBP19.71■□□□□ 0.75
CLCN6-204ENST00000376491 LRP10Q7Z4F1 713 aa19.71■□□□□ 0.75
CLCN6-204ENST00000376491 ZNF34Q8IZ26 560 aa19.71■□□□□ 0.75
CLCN6-204ENST00000376491 SYNE4Q8N205 404 aa19.71■□□□□ 0.75
CLCN6-204ENST00000376491 TAF1DQ9H5J8 278 aaPredicted RBP19.71■□□□□ 0.75
CLCN6-204ENST00000376491 IARSP41252 1262 aaKnown RBP19.7■□□□□ 0.74
CLCN6-204ENST00000376491 PDIA6Q15084 440 aa19.7■□□□□ 0.74
CLCN6-204ENST00000376491 TSPYL4Q9UJ04 414 aa19.7■□□□□ 0.74
CLCN6-204ENST00000376491 ERBB4Q15303 1308 aa19.7■□□□□ 0.74
CLCN6-204ENST00000376491 IBTKQ9P2D0 1353 aaPredicted RBP19.7■□□□□ 0.74
CLCN6-204ENST00000376491 IQCA1LA6NCM1 817 aa19.69■□□□□ 0.74
CLCN6-204ENST00000376491 RIPK4P57078 832 aa19.69■□□□□ 0.74
CLCN6-204ENST00000376491 GIGYF2Q6Y7W6 1299 aaKnown RBP19.69■□□□□ 0.74
CLCN6-204ENST00000376491 SLC51AQ86UW1 340 aa19.69■□□□□ 0.74
CLCN6-204ENST00000376491 RIC1Q4ADV7 1423 aa19.68■□□□□ 0.74
CLCN6-204ENST00000376491 FZD9O00144 591 aa19.68■□□□□ 0.74
CLCN6-204ENST00000376491 NTSR2O95665 410 aa19.68■□□□□ 0.74
CLCN6-204ENST00000376491 RALBP1Q15311 655 aa19.68■□□□□ 0.74
CLCN6-204ENST00000376491 COL4A5P29400 1685 aa19.68■□□□□ 0.74
CLCN6-204ENST00000376491 ANXA1P04083 346 aa19.67■□□□□ 0.74
CLCN6-204ENST00000376491 HSPA1AP0DMV8 641 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms