RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 IRX3P78415 501 aaPredicted RBP13.75□□□□□ -0.21
TM9SF2-201ENST00000376387 PI4K2BQ8TCG2 481 aa13.75□□□□□ -0.21
TM9SF2-201ENST00000376387 CCDC61Q9Y6R9 512 aa13.75□□□□□ -0.21
TM9SF2-201ENST00000376387 METP08581 1390 aa13.75□□□□□ -0.21
TM9SF2-201ENST00000376387 SGSM2O43147 1006 aa13.75□□□□□ -0.21
TM9SF2-201ENST00000376387 LETM1O95202 739 aaPredicted RBP13.75□□□□□ -0.21
TM9SF2-201ENST00000376387 GJB2P29033 226 aa13.75□□□□□ -0.21
TM9SF2-201ENST00000376387 CWC27Q6UX04 472 aaKnown RBP13.75□□□□□ -0.21
TM9SF2-201ENST00000376387 LIMCH1Q9UPQ0 1083 aa13.75□□□□□ -0.21
TM9SF2-201ENST00000376387 SETD1AO15047 1707 aaKnown RBP13.75□□□□□ -0.21
TM9SF2-201ENST00000376387 COL9A3Q14050 684 aaPredicted RBP13.74□□□□□ -0.21
TM9SF2-201ENST00000376387 CAMK4Q16566 473 aa13.74□□□□□ -0.21
TM9SF2-201ENST00000376387 FAM173BQ6P4H8 233 aa13.74□□□□□ -0.21
TM9SF2-201ENST00000376387 USP44Q9H0E7 712 aa13.74□□□□□ -0.21
TM9SF2-201ENST00000376387 MTMR6Q9Y217 621 aa13.74□□□□□ -0.21
TM9SF2-201ENST00000376387 CASTP20810 708 aaKnown RBP13.74□□□□□ -0.21
TM9SF2-201ENST00000376387 ST3GAL1Q11201 340 aa13.74□□□□□ -0.21
TM9SF2-201ENST00000376387 LRMPQ12912 555 aa13.74□□□□□ -0.21
TM9SF2-201ENST00000376387 ADCK5Q3MIX3 580 aa13.74□□□□□ -0.21
TM9SF2-201ENST00000376387 XRN1Q8IZH2 1706 aaKnown RBP13.74□□□□□ -0.21
TM9SF2-201ENST00000376387 NAA30Q147X3 362 aaPredicted RBP13.74□□□□□ -0.21
TM9SF2-201ENST00000376387 ANKRD7Q92527 254 aa13.74□□□□□ -0.21
TM9SF2-201ENST00000376387 GNAI3P08754 354 aa13.73□□□□□ -0.21
TM9SF2-201ENST00000376387 LUZP1Q86V48 1076 aa13.73□□□□□ -0.21
TM9SF2-201ENST00000376387 CHMP4CQ96CF2 233 aa13.73□□□□□ -0.21
TM9SF2-201ENST00000376387 STK31Q9BXU1 1019 aa13.73□□□□□ -0.21
TM9SF2-201ENST00000376387 TMEM51Q9NW97 253 aa13.73□□□□□ -0.21
TM9SF2-201ENST00000376387 NRBP1Q9UHY1 535 aa13.73□□□□□ -0.21
TM9SF2-201ENST00000376387 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
TM9SF2-201ENST00000376387 HYPKQ9NX55 129 aa13.73□□□□□ -0.21
TM9SF2-201ENST00000376387 VPS37CA5D8V6 355 aaPredicted RBP13.73□□□□□ -0.21
TM9SF2-201ENST00000376387 SURF6O75683 361 aaKnown RBP13.73□□□□□ -0.21
TM9SF2-201ENST00000376387 RTF1Q92541 710 aaKnown RBP13.73□□□□□ -0.21
TM9SF2-201ENST00000376387 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.72□□□□□ -0.21
TM9SF2-201ENST00000376387 LIG1P18858 919 aa13.72□□□□□ -0.21
TM9SF2-201ENST00000376387 PTH1RQ03431 593 aa13.72□□□□□ -0.21
TM9SF2-201ENST00000376387 PPP1R42Q7Z4L9 355 aa13.72□□□□□ -0.21
TM9SF2-201ENST00000376387 AKAP12Q02952 1782 aa13.72□□□□□ -0.21
TM9SF2-201ENST00000376387 CTIFO43310 598 aaKnown RBP13.71□□□□□ -0.21
TM9SF2-201ENST00000376387 FERMT3Q86UX7 667 aa13.71□□□□□ -0.21
TM9SF2-201ENST00000376387 GTPBP4Q9BZE4 634 aaKnown RBP13.71□□□□□ -0.21
TM9SF2-201ENST00000376387 SOS1Q07889 1333 aaPredicted RBP13.71□□□□□ -0.21
TM9SF2-201ENST00000376387 RGPD1P0DJD0 1748 aa13.71□□□□□ -0.21
TM9SF2-201ENST00000376387 CKAP2LQ8IYA6 745 aa13.71□□□□□ -0.21
TM9SF2-201ENST00000376387 NCBP1Q09161 790 aaKnown RBP13.71□□□□□ -0.22
TM9SF2-201ENST00000376387 TTC6Q86TZ1 520 aa13.71□□□□□ -0.22
TM9SF2-201ENST00000376387 C16orf45Q96MC5 204 aaPredicted RBP13.71□□□□□ -0.22
TM9SF2-201ENST00000376387 PHAXQ9H814 394 aaKnown RBP13.71□□□□□ -0.22
TM9SF2-201ENST00000376387 MRVI1Q9Y6F6 885 aa13.71□□□□□ -0.22
TM9SF2-201ENST00000376387 TTC21BQ7Z4L5 1316 aa13.71□□□□□ -0.22
TM9SF2-201ENST00000376387 ITSN1Q15811 1721 aa13.71□□□□□ -0.22
TM9SF2-201ENST00000376387 UBTFL1P0CB47 393 aaPredicted RBP13.7□□□□□ -0.22
TM9SF2-201ENST00000376387 CCDC186Q7Z3E2 898 aa13.7□□□□□ -0.22
TM9SF2-201ENST00000376387 RHPN1Q8TCX5 695 aa13.7□□□□□ -0.22
TM9SF2-201ENST00000376387 DIAPH3Q9NSV4 1193 aa13.7□□□□□ -0.22
TM9SF2-201ENST00000376387 CHAF1AQ13111 956 aaPredicted RBP13.7□□□□□ -0.22
TM9SF2-201ENST00000376387 JAKMIP1Q96N16 626 aaKnown RBP13.7□□□□□ -0.22
TM9SF2-201ENST00000376387 ME3Q16798 604 aa13.7□□□□□ -0.22
TM9SF2-201ENST00000376387 PRPF40BQ6NWY9 871 aaKnown RBP13.7□□□□□ -0.22
TM9SF2-201ENST00000376387 SSH3Q8TE77 659 aa13.7□□□□□ -0.22
TM9SF2-201ENST00000376387 A2ML1A8K2U0 1454 aa13.7□□□□□ -0.22
TM9SF2-201ENST00000376387 FAM208AQ9UK61 1670 aaKnown RBP13.69□□□□□ -0.22
TM9SF2-201ENST00000376387 CCDC192P0DO97 292 aa13.69□□□□□ -0.22
TM9SF2-201ENST00000376387 AOX1Q06278 1338 aa13.69□□□□□ -0.22
TM9SF2-201ENST00000376387 PDRG1Q9NUG6 133 aa13.69□□□□□ -0.22
TM9SF2-201ENST00000376387 TYRO3Q06418 890 aa13.68□□□□□ -0.22
TM9SF2-201ENST00000376387 CDC37L1Q7L3B6 337 aa13.68□□□□□ -0.22
TM9SF2-201ENST00000376387 CCDC30Q5VVM6 783 aa13.68□□□□□ -0.22
TM9SF2-201ENST00000376387 ATP6V1DQ9Y5K8 247 aa13.68□□□□□ -0.22
TM9SF2-201ENST00000376387 ACEP12821 1306 aa13.68□□□□□ -0.22
TM9SF2-201ENST00000376387 NRXN3Q9Y4C0 1643 aa13.68□□□□□ -0.22
TM9SF2-201ENST00000376387 SRGAP3O43295 1099 aa13.68□□□□□ -0.22
TM9SF2-201ENST00000376387 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
TM9SF2-201ENST00000376387 ANO6Q4KMQ2 910 aa13.67□□□□□ -0.22
TM9SF2-201ENST00000376387 FAM200AQ8TCP9 573 aa13.67□□□□□ -0.22
TM9SF2-201ENST00000376387 TCEANC2Q96MN5 208 aa13.67□□□□□ -0.22
TM9SF2-201ENST00000376387 CBX8Q9HC52 389 aa13.67□□□□□ -0.22
TM9SF2-201ENST00000376387 CEP170BQ9Y4F5 1589 aaPredicted RBP13.67□□□□□ -0.22
TM9SF2-201ENST00000376387 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
TM9SF2-201ENST00000376387 CNTROBQ8N137 903 aa13.67□□□□□ -0.22
TM9SF2-201ENST00000376387 TFIP11Q9UBB9 837 aaKnown RBP13.67□□□□□ -0.22
TM9SF2-201ENST00000376387 TPCN1Q9ULQ1 816 aa13.67□□□□□ -0.22
TM9SF2-201ENST00000376387 OVOS2A0A0J9YW53 1432 aa13.67□□□□□ -0.22
TM9SF2-201ENST00000376387 OVOS2Q6IE36 1432 aa13.67□□□□□ -0.22
TM9SF2-201ENST00000376387 ARHGEF10O15013 1369 aa13.67□□□□□ -0.22
TM9SF2-201ENST00000376387 POLA2Q14181 598 aa13.66□□□□□ -0.22
TM9SF2-201ENST00000376387 MAP3K11Q16584 847 aa13.66□□□□□ -0.22
TM9SF2-201ENST00000376387 GRIPAP1Q4V328 841 aa13.66□□□□□ -0.22
TM9SF2-201ENST00000376387 DRC7Q8IY82 874 aa13.66□□□□□ -0.22
TM9SF2-201ENST00000376387 EYA1Q99502 592 aa13.66□□□□□ -0.22
TM9SF2-201ENST00000376387 SPATA31D1Q6ZQQ2 1576 aa13.66□□□□□ -0.22
TM9SF2-201ENST00000376387 GOLGA6L6A8MZA4 724 aa13.66□□□□□ -0.22
TM9SF2-201ENST00000376387 EPB41L2O43491 1005 aaKnown RBP13.66□□□□□ -0.22
TM9SF2-201ENST00000376387 NUP62CLQ9H1M0 184 aa13.66□□□□□ -0.22
TM9SF2-201ENST00000376387 DACT1Q9NYF0 836 aa13.66□□□□□ -0.22
TM9SF2-201ENST00000376387 TPM3P06753 285 aa13.65□□□□□ -0.22
TM9SF2-201ENST00000376387 CCDC144BQ3MJ40 725 aa13.65□□□□□ -0.22
TM9SF2-201ENST00000376387 ZSCAN25Q6NSZ9 544 aa13.65□□□□□ -0.22
TM9SF2-201ENST00000376387 CCDC144CPQ8IYA2 1237 aa13.65□□□□□ -0.22
TM9SF2-201ENST00000376387 KIF20AO95235 890 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms