RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 MROH1Q8NDA8 1641 aa12.04□□□□□ -0.48
ZNF550-203ENST00000376230 ARHGEF40Q8TER5 1519 aa12.04□□□□□ -0.48
ZNF550-203ENST00000376230 AKAP4Q5JQC9 854 aa12.04□□□□□ -0.48
ZNF550-203ENST00000376230 LARP1BQ659C4 914 aaKnown RBP12.04□□□□□ -0.48
ZNF550-203ENST00000376230 ACSBG1Q96GR2 724 aa12.04□□□□□ -0.48
ZNF550-203ENST00000376230 GLRX3O76003 335 aaKnown RBP12.04□□□□□ -0.48
ZNF550-203ENST00000376230 SLC4A8Q2Y0W8 1093 aa12.04□□□□□ -0.48
ZNF550-203ENST00000376230 RRP12Q5JTH9 1297 aaKnown RBP12.04□□□□□ -0.48
ZNF550-203ENST00000376230 CNPY2Q9Y2B0 182 aa12.04□□□□□ -0.48
ZNF550-203ENST00000376230 FMNL2Q96PY5 1086 aa12.03□□□□□ -0.48
ZNF550-203ENST00000376230 NSFL1CQ9UNZ2 370 aaKnown RBP12.03□□□□□ -0.48
ZNF550-203ENST00000376230 SEC62Q99442 399 aaKnown RBP12.03□□□□□ -0.48
ZNF550-203ENST00000376230 IL25Q9H293 177 aa12.03□□□□□ -0.48
ZNF550-203ENST00000376230 KIAA2012Q0VF49 1180 aa12.03□□□□□ -0.48
ZNF550-203ENST00000376230 C17orf53Q8N3J3 647 aaPredicted RBP12.03□□□□□ -0.48
ZNF550-203ENST00000376230 PIK3C2BO00750 1634 aa12.03□□□□□ -0.48
ZNF550-203ENST00000376230 PNPLA6Q8IY17 1366 aa12.03□□□□□ -0.48
ZNF550-203ENST00000376230 AK2P54819 239 aa12.02□□□□□ -0.48
ZNF550-203ENST00000376230 AMOTQ4VCS5 1084 aa12.02□□□□□ -0.48
ZNF550-203ENST00000376230 BLOC1S2Q6QNY1 142 aa12.02□□□□□ -0.48
ZNF550-203ENST00000376230 KSR2Q6VAB6 950 aa12.02□□□□□ -0.48
ZNF550-203ENST00000376230 CREBRFQ8IUR6 639 aa12.02□□□□□ -0.48
ZNF550-203ENST00000376230 CKAP2LQ8IYA6 745 aa12.02□□□□□ -0.48
ZNF550-203ENST00000376230 RASEFQ8IZ41 740 aa12.02□□□□□ -0.48
ZNF550-203ENST00000376230 PDCL3Q9H2J4 239 aa12.02□□□□□ -0.48
ZNF550-203ENST00000376230 ARAP3Q8WWN8 1544 aa12.02□□□□□ -0.48
ZNF550-203ENST00000376230 NMIQ13287 307 aaPredicted RBP12.02□□□□□ -0.49
ZNF550-203ENST00000376230 ZNF790Q6PG37 636 aa12.02□□□□□ -0.49
ZNF550-203ENST00000376230 LARP1Q6PKG0 1096 aaKnown RBP12.02□□□□□ -0.49
ZNF550-203ENST00000376230 CD163L1Q9NR16 1453 aa12.02□□□□□ -0.49
ZNF550-203ENST00000376230 PTH1RQ03431 593 aa12.02□□□□□ -0.49
ZNF550-203ENST00000376230 TFCP2Q12800 502 aa12.02□□□□□ -0.49
ZNF550-203ENST00000376230 SF3A1Q15459 793 aaKnown RBP12.01□□□□□ -0.49
ZNF550-203ENST00000376230 IFNL2Q8IZJ0 200 aa12.01□□□□□ -0.49
ZNF550-203ENST00000376230 PIBF1Q8WXW3 757 aa12.01□□□□□ -0.49
ZNF550-203ENST00000376230 LMBRD1Q9NUN5 540 aa12.01□□□□□ -0.49
ZNF550-203ENST00000376230 TBC1D2BQ9UPU7 963 aa12.01□□□□□ -0.49
ZNF550-203ENST00000376230 IGSF1Q8N6C5 1336 aa12.01□□□□□ -0.49
ZNF550-203ENST00000376230 ARHGAP31Q2M1Z3 1444 aa12.01□□□□□ -0.49
ZNF550-203ENST00000376230 GADD45BO75293 160 aaPredicted RBP12.01□□□□□ -0.49
ZNF550-203ENST00000376230 IDH1O75874 414 aaKnown RBP12.01□□□□□ -0.49
ZNF550-203ENST00000376230 CCDC144CPQ8IYA2 1237 aa12.01□□□□□ -0.49
ZNF550-203ENST00000376230 FAM89AQ96GI7 184 aa12.01□□□□□ -0.49
ZNF550-203ENST00000376230 CNNM1Q9NRU3 951 aa12.01□□□□□ -0.49
ZNF550-203ENST00000376230 TMEM63CQ9P1W3 806 aa12.01□□□□□ -0.49
ZNF550-203ENST00000376230 ZHX1Q9UKY1 873 aaPredicted RBP12.01□□□□□ -0.49
ZNF550-203ENST00000376230 CCDC24Q8N4L8 307 aa12.01□□□□□ -0.49
ZNF550-203ENST00000376230 HDAC5Q9UQL6 1122 aa12.01□□□□□ -0.49
ZNF550-203ENST00000376230 RBM8AQ9Y5S9 174 aaKnown RBP12.01□□□□□ -0.49
ZNF550-203ENST00000376230 GIGYF1O75420 1035 aaPredicted RBP12□□□□□ -0.49
ZNF550-203ENST00000376230 OFD1O75665 1012 aa12□□□□□ -0.49
ZNF550-203ENST00000376230 GJB2P29033 226 aa12□□□□□ -0.49
ZNF550-203ENST00000376230 KCNQ4P56696 695 aa12□□□□□ -0.49
ZNF550-203ENST00000376230 GIMAP6Q6P9H5 292 aa12□□□□□ -0.49
ZNF550-203ENST00000376230 GPT2Q8TD30 523 aa12□□□□□ -0.49
ZNF550-203ENST00000376230 SYAP1Q96A49 352 aaPredicted RBP12□□□□□ -0.49
ZNF550-203ENST00000376230 EAF2Q96CJ1 260 aaPredicted RBP12□□□□□ -0.49
ZNF550-203ENST00000376230 DBNDD2Q9BQY9 259 aa12□□□□□ -0.49
ZNF550-203ENST00000376230 CHMP4AQ9BY43 222 aa12□□□□□ -0.49
ZNF550-203ENST00000376230 USP25Q9UHP3 1055 aa12□□□□□ -0.49
ZNF550-203ENST00000376230 AK9Q5TCS8 1911 aa12□□□□□ -0.49
ZNF550-203ENST00000376230 TTLL7Q6ZT98 887 aa12□□□□□ -0.49
ZNF550-203ENST00000376230 CCDC57Q2TAC2 916 aa12□□□□□ -0.49
ZNF550-203ENST00000376230 ADCK5Q3MIX3 580 aa12□□□□□ -0.49
ZNF550-203ENST00000376230 RNF20Q5VTR2 975 aa12□□□□□ -0.49
ZNF550-203ENST00000376230 DNM1Q05193 864 aaKnown RBP11.99□□□□□ -0.49
ZNF550-203ENST00000376230 C19orf44Q9H6X5 657 aa11.99□□□□□ -0.49
ZNF550-203ENST00000376230 HYPKQ9NX55 129 aa11.99□□□□□ -0.49
ZNF550-203ENST00000376230 BEND3Q5T5X7 828 aa11.99□□□□□ -0.49
ZNF550-203ENST00000376230 TTC12Q9H892 705 aaPredicted RBP11.99□□□□□ -0.49
ZNF550-203ENST00000376230 A0A0U1RQG5 324 aaPredicted RBP11.98□□□□□ -0.49
ZNF550-203ENST00000376230 HCLS1P14317 486 aaPredicted RBP11.98□□□□□ -0.49
ZNF550-203ENST00000376230 USP48Q86UV5 1035 aa11.98□□□□□ -0.49
ZNF550-203ENST00000376230 TSPY26PQ9H489 355 aa11.98□□□□□ -0.49
ZNF550-203ENST00000376230 MYO3AQ8NEV4 1616 aa11.98□□□□□ -0.49
ZNF550-203ENST00000376230 IQSEC2Q5JU85 1478 aa11.98□□□□□ -0.49
ZNF550-203ENST00000376230 AATKQ6ZMQ8 1374 aa11.98□□□□□ -0.49
ZNF550-203ENST00000376230 CPLX1O14810 134 aa11.98□□□□□ -0.49
ZNF550-203ENST00000376230 CEP126Q9P2H0 1117 aa11.98□□□□□ -0.49
ZNF550-203ENST00000376230 CCDC39Q9UFE4 941 aa11.98□□□□□ -0.49
ZNF550-203ENST00000376230 NRXN1Q9ULB1 1477 aa11.98□□□□□ -0.49
ZNF550-203ENST00000376230 SNRPA1P09661 255 aaKnown RBP11.98□□□□□ -0.49
ZNF550-203ENST00000376230 TTC39AQ5SRH9 613 aa11.98□□□□□ -0.49
ZNF550-203ENST00000376230 LINS1Q8NG48 757 aa11.98□□□□□ -0.49
ZNF550-203ENST00000376230 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.98□□□□□ -0.49
ZNF550-203ENST00000376230 PTPRUQ92729 1446 aa11.97□□□□□ -0.49
ZNF550-203ENST00000376230 RXRAP19793 462 aa11.97□□□□□ -0.49
ZNF550-203ENST00000376230 EPHA10Q5JZY3 1008 aa11.97□□□□□ -0.49
ZNF550-203ENST00000376230 ISM2Q6H9L7 571 aa11.97□□□□□ -0.49
ZNF550-203ENST00000376230 ZNF592Q92610 1267 aa11.97□□□□□ -0.49
ZNF550-203ENST00000376230 BRF1Q92994 677 aa11.97□□□□□ -0.49
ZNF550-203ENST00000376230 CWC22Q9HCG8 908 aaKnown RBP11.97□□□□□ -0.49
ZNF550-203ENST00000376230 CBX1P83916 185 aa11.97□□□□□ -0.49
ZNF550-203ENST00000376230 NFXL1Q6ZNB6 911 aa11.97□□□□□ -0.49
ZNF550-203ENST00000376230 TMOD3Q9NYL9 352 aa11.97□□□□□ -0.49
ZNF550-203ENST00000376230 LIMCH1Q9UPQ0 1083 aa11.97□□□□□ -0.49
ZNF550-203ENST00000376230 JAG2Q9Y219 1238 aa11.97□□□□□ -0.49
ZNF550-203ENST00000376230 CPSF1Q10570 1443 aaKnown RBP11.97□□□□□ -0.49
ZNF550-203ENST00000376230 ATP7BP35670 1465 aa11.97□□□□□ -0.49
ZNF550-203ENST00000376230 IFIT1P09914 478 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms