RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 RRP9O43818 475 aaKnown RBP7.39□□□□□ -1.23
PTPN3-202ENST00000374541 ECE1P42892 770 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 SYCP1Q15431 976 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 MAPKBP1O60336 1514 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 HLA-DOAP06340 250 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 CNGA1P29973 690 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 COG6Q9Y2V7 657 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 ADCY10Q96PN6 1610 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 UBTFL1P0CB47 393 aaPredicted RBP7.39□□□□□ -1.23
PTPN3-202ENST00000374541 NBPF1Q3BBV0 1214 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 BRINP3Q76B58 766 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 ARMC9Q7Z3E5 817 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 AEBP1Q8IUX7 1158 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 STK11IPQ8N1F8 1099 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 SYCP2Q9BX26 1530 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 MAGI2Q86UL8 1455 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 CCDC7Q96M83 1385 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 TNIP1Q15025 636 aa7.38□□□□□ -1.23
PTPN3-202ENST00000374541 UTP14AQ9BVJ6 771 aaKnown RBP7.38□□□□□ -1.23
PTPN3-202ENST00000374541 LARP1Q6PKG0 1096 aaKnown RBP7.38□□□□□ -1.23
PTPN3-202ENST00000374541 FAM107BQ9H098 131 aa7.38□□□□□ -1.23
PTPN3-202ENST00000374541 TMOD4Q9NZQ9 345 aa7.38□□□□□ -1.23
PTPN3-202ENST00000374541 ANKRD18BA2A2Z9 1011 aa7.38□□□□□ -1.23
PTPN3-202ENST00000374541 PPP1R12BO60237 982 aaPredicted RBP7.38□□□□□ -1.23
PTPN3-202ENST00000374541 SEPT7Q16181 437 aaKnown RBP7.38□□□□□ -1.23
PTPN3-202ENST00000374541 ZNF804AQ7Z570 1209 aa7.38□□□□□ -1.23
PTPN3-202ENST00000374541 DRC1Q96MC2 740 aa7.38□□□□□ -1.23
PTPN3-202ENST00000374541 CDC42BPAQ5VT25 1732 aa7.38□□□□□ -1.23
PTPN3-202ENST00000374541 TRAK2O60296 914 aa7.38□□□□□ -1.23
PTPN3-202ENST00000374541 CCDC192P0DO97 292 aa7.38□□□□□ -1.23
PTPN3-202ENST00000374541 PDE3AQ14432 1141 aa7.38□□□□□ -1.23
PTPN3-202ENST00000374541 FOXD4L6Q3SYB3 417 aaPredicted RBP7.38□□□□□ -1.23
PTPN3-202ENST00000374541 FOXD4L3Q6VB84 417 aaPredicted RBP7.38□□□□□ -1.23
PTPN3-202ENST00000374541 KCNQ2O43526 872 aa7.38□□□□□ -1.23
PTPN3-202ENST00000374541 IFIT5Q13325 482 aaKnown RBP7.38□□□□□ -1.23
PTPN3-202ENST00000374541 STIM1Q13586 685 aa7.38□□□□□ -1.23
PTPN3-202ENST00000374541 EZH2Q15910 746 aaKnown RBP7.38□□□□□ -1.23
PTPN3-202ENST00000374541 ZFYVE27Q5T4F4 411 aa7.38□□□□□ -1.23
PTPN3-202ENST00000374541 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.38□□□□□ -1.23
PTPN3-202ENST00000374541 BRD4O60885 1362 aaPredicted RBP7.37□□□□□ -1.23
PTPN3-202ENST00000374541 ADGRF5Q8IZF2 1346 aa7.37□□□□□ -1.23
PTPN3-202ENST00000374541 SMC2O95347 1197 aa7.37□□□□□ -1.23
PTPN3-202ENST00000374541 CNTROBQ8N137 903 aa7.37□□□□□ -1.23
PTPN3-202ENST00000374541 CEP126Q9P2H0 1117 aa7.37□□□□□ -1.23
PTPN3-202ENST00000374541 GPHNQ9NQX3 736 aaPredicted RBP7.37□□□□□ -1.23
PTPN3-202ENST00000374541 MKRN3Q13064 507 aaKnown RBP7.37□□□□□ -1.23
PTPN3-202ENST00000374541 DYDC1Q8WWB3 177 aa7.37□□□□□ -1.23
PTPN3-202ENST00000374541 RUNDC1Q96C34 613 aa7.37□□□□□ -1.23
PTPN3-202ENST00000374541 ZNF287Q9HBT7 754 aa7.37□□□□□ -1.23
PTPN3-202ENST00000374541 TRPM2O94759 1503 aa7.37□□□□□ -1.23
PTPN3-202ENST00000374541 ANKRD1Q15327 319 aa7.37□□□□□ -1.23
PTPN3-202ENST00000374541 CCDC181Q5TID7 509 aa7.37□□□□□ -1.23
PTPN3-202ENST00000374541 PPFIBP1Q86W92 1011 aa7.37□□□□□ -1.23
PTPN3-202ENST00000374541 SPC25Q9HBM1 224 aa7.37□□□□□ -1.23
PTPN3-202ENST00000374541 CIZ1Q9ULV3 898 aaPredicted RBP7.37□□□□□ -1.23
PTPN3-202ENST00000374541 NEFHP12036 1026 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 TNS4Q8IZW8 715 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 LDHCP07864 332 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 SNRPA1P09661 255 aaKnown RBP7.36□□□□□ -1.23
PTPN3-202ENST00000374541 MCM3P25205 808 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 BRDTQ58F21 947 aaPredicted RBP7.36□□□□□ -1.23
PTPN3-202ENST00000374541 MYD88Q99836 296 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 SLC5A1P13866 664 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 NFE2L2Q16236 605 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 THRAP3Q9Y2W1 955 aaKnown RBP7.36□□□□□ -1.23
PTPN3-202ENST00000374541 GNAI3P08754 354 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 ERC1Q8IUD2 1116 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 DNAJC2Q99543 621 aaKnown RBP7.36□□□□□ -1.23
PTPN3-202ENST00000374541 NACAP1Q9BZK3 213 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 CDC42BPBQ9Y5S2 1711 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 ZBTB33Q86T24 672 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 TTLL6Q8N841 843 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 CDK5RAP3Q96JB5 506 aa7.36□□□□□ -1.23
PTPN3-202ENST00000374541 LBHD1Q9BQE6 289 aaPredicted RBP7.36□□□□□ -1.23
PTPN3-202ENST00000374541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.36□□□□□ -1.23
PTPN3-202ENST00000374541 PLCD4Q9BRC7 762 aa7.35□□□□□ -1.23
PTPN3-202ENST00000374541 SIL1Q9H173 461 aa7.35□□□□□ -1.23
PTPN3-202ENST00000374541 GPATCH8Q9UKJ3 1502 aaKnown RBP7.35□□□□□ -1.23
PTPN3-202ENST00000374541 DESP17661 470 aa7.35□□□□□ -1.23
PTPN3-202ENST00000374541 CCDC24Q8N4L8 307 aa7.35□□□□□ -1.23
PTPN3-202ENST00000374541 NBPF3Q9H094 633 aa7.35□□□□□ -1.23
PTPN3-202ENST00000374541 SLC5A4Q9NY91 659 aa7.35□□□□□ -1.23
PTPN3-202ENST00000374541 GIMAP7Q8NHV1 300 aa7.35□□□□□ -1.23
PTPN3-202ENST00000374541 WDR33Q9C0J8 1336 aaKnown RBP7.35□□□□□ -1.23
PTPN3-202ENST00000374541 TAOK3Q9H2K8 898 aa7.35□□□□□ -1.23
PTPN3-202ENST00000374541 B4DLN1 442 aa7.35□□□□□ -1.23
PTPN3-202ENST00000374541 HOXD10P28358 340 aa7.35□□□□□ -1.23
PTPN3-202ENST00000374541 ZNF76P36508 570 aa7.35□□□□□ -1.23
PTPN3-202ENST00000374541 MRPL12P52815 198 aaKnown RBP7.35□□□□□ -1.23
PTPN3-202ENST00000374541 STK38Q15208 465 aa7.35□□□□□ -1.23
PTPN3-202ENST00000374541 ENOX2Q16206 610 aaKnown RBP7.35□□□□□ -1.23
PTPN3-202ENST00000374541 TTC21BQ7Z4L5 1316 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 STK25O00506 426 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 MPNDQ8N594 471 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 DPF3Q92784 378 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 GCC1Q96CN9 775 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 PODXL2Q9NZ53 605 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 GLRX3O76003 335 aaKnown RBP7.34□□□□□ -1.23
PTPN3-202ENST00000374541 UFL1O94874 794 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 GBP2P32456 591 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms