RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 ZSCAN22P10073 491 aaPredicted RBP13.71□□□□□ -0.21
PTPN20-204ENST00000374346 PDIA4P13667 645 aaKnown RBP13.71□□□□□ -0.21
PTPN20-204ENST00000374346 AK2P54819 239 aa13.71□□□□□ -0.21
PTPN20-204ENST00000374346 PSME1Q06323 249 aa13.71□□□□□ -0.21
PTPN20-204ENST00000374346 UVSSAQ2YD98 709 aa13.71□□□□□ -0.21
PTPN20-204ENST00000374346 ZNF530Q6P9A1 599 aaPredicted RBP13.71□□□□□ -0.21
PTPN20-204ENST00000374346 RNF214Q8ND24 703 aa13.71□□□□□ -0.21
PTPN20-204ENST00000374346 ECHDC1Q9NTX5 307 aa13.71□□□□□ -0.21
PTPN20-204ENST00000374346 NCAPD2Q15021 1401 aa13.71□□□□□ -0.21
PTPN20-204ENST00000374346 CRYBG1Q9Y4K1 1723 aa13.71□□□□□ -0.21
PTPN20-204ENST00000374346 HIP1O00291 1037 aa13.71□□□□□ -0.21
PTPN20-204ENST00000374346 CCDC183Q5T5S1 534 aa13.71□□□□□ -0.21
PTPN20-204ENST00000374346 ZSCAN31Q96LW9 406 aaPredicted RBP13.71□□□□□ -0.21
PTPN20-204ENST00000374346 ZKSCAN1P17029 563 aaPredicted RBP13.7□□□□□ -0.22
PTPN20-204ENST00000374346 CASTP20810 708 aaKnown RBP13.7□□□□□ -0.22
PTPN20-204ENST00000374346 UBE2HP62256 183 aa13.7□□□□□ -0.22
PTPN20-204ENST00000374346 FOXD4L6Q3SYB3 417 aaPredicted RBP13.7□□□□□ -0.22
PTPN20-204ENST00000374346 FOXD4L3Q6VB84 417 aaPredicted RBP13.7□□□□□ -0.22
PTPN20-204ENST00000374346 SH2B1Q9NRF2 756 aaPredicted RBP13.7□□□□□ -0.22
PTPN20-204ENST00000374346 VPS53Q5VIR6 699 aa13.7□□□□□ -0.22
PTPN20-204ENST00000374346 EVI5LQ96CN4 794 aa13.7□□□□□ -0.22
PTPN20-204ENST00000374346 NFAT5O94916 1531 aa13.7□□□□□ -0.22
PTPN20-204ENST00000374346 ADCY9O60503 1353 aa13.7□□□□□ -0.22
PTPN20-204ENST00000374346 RPAP1Q9BWH6 1393 aaPredicted RBP13.7□□□□□ -0.22
PTPN20-204ENST00000374346 PHRF1Q9P1Y6 1649 aaKnown RBP13.69□□□□□ -0.22
PTPN20-204ENST00000374346 OVOS2A0A0G2JMS6 1433 aa13.69□□□□□ -0.22
PTPN20-204ENST00000374346 KSR2Q6VAB6 950 aa13.69□□□□□ -0.22
PTPN20-204ENST00000374346 GDPD2Q9HCC8 539 aa13.69□□□□□ -0.22
PTPN20-204ENST00000374346 SPG7Q9UQ90 795 aa13.69□□□□□ -0.22
PTPN20-204ENST00000374346 CYP46A1Q9Y6A2 500 aa13.69□□□□□ -0.22
PTPN20-204ENST00000374346 ZBTB7CA1YPR0 619 aa13.69□□□□□ -0.22
PTPN20-204ENST00000374346 DDX58O95786 925 aaKnown RBP13.69□□□□□ -0.22
PTPN20-204ENST00000374346 TM6SF1Q9BZW5 370 aa13.69□□□□□ -0.22
PTPN20-204ENST00000374346 MAP3K2Q9Y2U5 619 aa13.69□□□□□ -0.22
PTPN20-204ENST00000374346 F13A1P00488 732 aa13.68□□□□□ -0.22
PTPN20-204ENST00000374346 SYT1P21579 422 aa13.68□□□□□ -0.22
PTPN20-204ENST00000374346 RUFY3Q7L099 469 aa13.68□□□□□ -0.22
PTPN20-204ENST00000374346 RASEFQ8IZ41 740 aa13.68□□□□□ -0.22
PTPN20-204ENST00000374346 PDRG1Q9NUG6 133 aa13.68□□□□□ -0.22
PTPN20-204ENST00000374346 HYPKQ9NX55 129 aa13.68□□□□□ -0.22
PTPN20-204ENST00000374346 GADD45BO75293 160 aaPredicted RBP13.68□□□□□ -0.22
PTPN20-204ENST00000374346 MPRIPQ6WCQ1 1025 aa13.68□□□□□ -0.22
PTPN20-204ENST00000374346 JAKMIP1Q96N16 626 aaKnown RBP13.67□□□□□ -0.22
PTPN20-204ENST00000374346 CHD2O14647 1828 aaKnown RBP13.67□□□□□ -0.22
PTPN20-204ENST00000374346 RNMTO43148 476 aaKnown RBP13.67□□□□□ -0.22
PTPN20-204ENST00000374346 KCNJ4P48050 445 aa13.67□□□□□ -0.22
PTPN20-204ENST00000374346 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.67□□□□□ -0.22
PTPN20-204ENST00000374346 CNPY2Q9Y2B0 182 aa13.67□□□□□ -0.22
PTPN20-204ENST00000374346 RGPD2P0DJD1 1756 aa13.67□□□□□ -0.22
PTPN20-204ENST00000374346 KCNQ3O43525 872 aa13.66□□□□□ -0.22
PTPN20-204ENST00000374346 GIGYF1O75420 1035 aaPredicted RBP13.66□□□□□ -0.22
PTPN20-204ENST00000374346 ANXA1P04083 346 aa13.66□□□□□ -0.22
PTPN20-204ENST00000374346 PSMA5P28066 241 aa13.66□□□□□ -0.22
PTPN20-204ENST00000374346 G3BP1Q13283 466 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTPN20-204ENST00000374346 ESCO1Q5FWF5 840 aa13.66□□□□□ -0.22
PTPN20-204ENST00000374346 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
PTPN20-204ENST00000374346 R3HCC1Q9Y3T6 440 aaKnown RBP13.66□□□□□ -0.22
PTPN20-204ENST00000374346 XPCQ01831 940 aaPredicted RBP13.66□□□□□ -0.22
PTPN20-204ENST00000374346 KIAA2012Q0VF49 1180 aa13.66□□□□□ -0.22
PTPN20-204ENST00000374346 RNF20Q5VTR2 975 aa13.66□□□□□ -0.22
PTPN20-204ENST00000374346 PRPF40BQ6NWY9 871 aaKnown RBP13.66□□□□□ -0.22
PTPN20-204ENST00000374346 AACSQ86V21 672 aa13.66□□□□□ -0.22
PTPN20-204ENST00000374346 LINS1Q8NG48 757 aa13.66□□□□□ -0.22
PTPN20-204ENST00000374346 GJB2P29033 226 aa13.65□□□□□ -0.22
PTPN20-204ENST00000374346 KCNB2Q92953 911 aa13.65□□□□□ -0.22
PTPN20-204ENST00000374346 PDCL3Q9H2J4 239 aa13.65□□□□□ -0.22
PTPN20-204ENST00000374346 CCDC171Q6TFL3 1326 aa13.65□□□□□ -0.22
PTPN20-204ENST00000374346 GRM8O00222 908 aa13.65□□□□□ -0.22
PTPN20-204ENST00000374346 FIBPO43427 364 aa13.64□□□□□ -0.23
PTPN20-204ENST00000374346 ANKRD1Q15327 319 aa13.64□□□□□ -0.23
PTPN20-204ENST00000374346 ANKLE2Q86XL3 938 aa13.64□□□□□ -0.23
PTPN20-204ENST00000374346 CCDC83Q8IWF9 413 aa13.64□□□□□ -0.23
PTPN20-204ENST00000374346 LRRC59Q96AG4 307 aaKnown RBP13.64□□□□□ -0.23
PTPN20-204ENST00000374346 PDCP20941 246 aa13.64□□□□□ -0.23
PTPN20-204ENST00000374346 NECTIN1Q15223 517 aa13.64□□□□□ -0.23
PTPN20-204ENST00000374346 PTH1RQ03431 593 aa13.63□□□□□ -0.23
PTPN20-204ENST00000374346 HEG1Q9ULI3 1381 aa13.63□□□□□ -0.23
PTPN20-204ENST00000374346 NEXNQ0ZGT2 675 aa13.63□□□□□ -0.23
PTPN20-204ENST00000374346 CWF19L2Q2TBE0 894 aaKnown RBP13.63□□□□□ -0.23
PTPN20-204ENST00000374346 MAP7D2Q96T17 732 aa13.63□□□□□ -0.23
PTPN20-204ENST00000374346 LARP6Q9BRS8 491 aaKnown RBP13.63□□□□□ -0.23
PTPN20-204ENST00000374346 UTYO14607 1347 aa13.62□□□□□ -0.23
PTPN20-204ENST00000374346 GCP02774 474 aa13.62□□□□□ -0.23
PTPN20-204ENST00000374346 DDX21Q9NR30 783 aaKnown RBP eCLIP13.62□□□□□ -0.23
PTPN20-204ENST00000374346 PA2G4Q9UQ80 394 aaKnown RBP13.62□□□□□ -0.23
PTPN20-204ENST00000374346 RBM8AQ9Y5S9 174 aaKnown RBP13.62□□□□□ -0.23
PTPN20-204ENST00000374346 ADCK5Q3MIX3 580 aa13.62□□□□□ -0.23
PTPN20-204ENST00000374346 CREB3L3Q68CJ9 461 aa13.62□□□□□ -0.23
PTPN20-204ENST00000374346 ARHGEF25Q86VW2 580 aa13.62□□□□□ -0.23
PTPN20-204ENST00000374346 MAP4K1Q92918 833 aa13.62□□□□□ -0.23
PTPN20-204ENST00000374346 MTMR6Q9Y217 621 aa13.62□□□□□ -0.23
PTPN20-204ENST00000374346 VPS37CA5D8V6 355 aaPredicted RBP13.61□□□□□ -0.23
PTPN20-204ENST00000374346 CPA1P15085 419 aa13.61□□□□□ -0.23
PTPN20-204ENST00000374346 SASS6Q6UVJ0 657 aa13.61□□□□□ -0.23
PTPN20-204ENST00000374346 ANKRD24Q8TF21 1146 aa13.61□□□□□ -0.23
PTPN20-204ENST00000374346 HCLS1P14317 486 aaPredicted RBP13.61□□□□□ -0.23
PTPN20-204ENST00000374346 KRT85P78386 507 aa13.61□□□□□ -0.23
PTPN20-204ENST00000374346 DNM1Q05193 864 aaKnown RBP13.61□□□□□ -0.23
PTPN20-204ENST00000374346 PROSER3Q2NL68 480 aa13.61□□□□□ -0.23
PTPN20-204ENST00000374346 LARP1BQ659C4 914 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms