RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 AIMP1Q12904 312 aaKnown RBP12.2□□□□□ -0.46
PTPN20-202ENST00000374339 ANKRD13DQ6ZTN6 518 aa12.2□□□□□ -0.46
PTPN20-202ENST00000374339 COPS6Q7L5N1 327 aa12.2□□□□□ -0.46
PTPN20-202ENST00000374339 LRP10Q7Z4F1 713 aa12.2□□□□□ -0.46
PTPN20-202ENST00000374339 RIC3Q7Z5B4 369 aa12.2□□□□□ -0.46
PTPN20-202ENST00000374339 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
PTPN20-202ENST00000374339 RWDD1Q9H446 243 aaPredicted RBP12.2□□□□□ -0.46
PTPN20-202ENST00000374339 MAP3K2Q9Y2U5 619 aa12.2□□□□□ -0.46
PTPN20-202ENST00000374339 IBTKQ9P2D0 1353 aaPredicted RBP12.2□□□□□ -0.46
PTPN20-202ENST00000374339 COL5A3P25940 1745 aaPredicted RBP12.2□□□□□ -0.46
PTPN20-202ENST00000374339 NBPF26B4DH59 902 aa12.19□□□□□ -0.46
PTPN20-202ENST00000374339 ALDH1L1O75891 902 aa12.19□□□□□ -0.46
PTPN20-202ENST00000374339 NBPF14Q5TI25 921 aa12.19□□□□□ -0.46
PTPN20-202ENST00000374339 NBPF10Q6P3W6 841 aaKnown RBP12.19□□□□□ -0.46
PTPN20-202ENST00000374339 NPM2Q86SE8 214 aaKnown RBP12.19□□□□□ -0.46
PTPN20-202ENST00000374339 NBPF15Q8N660 670 aa12.19□□□□□ -0.46
PTPN20-202ENST00000374339 PLBD2Q8NHP8 589 aa12.19□□□□□ -0.46
PTPN20-202ENST00000374339 SLC4A9Q96Q91 983 aa12.19□□□□□ -0.46
PTPN20-202ENST00000374339 HDAC5Q9UQL6 1122 aa12.19□□□□□ -0.46
PTPN20-202ENST00000374339 LY75O60449 1722 aa12.19□□□□□ -0.46
PTPN20-202ENST00000374339 NUP188Q5SRE5 1749 aa12.19□□□□□ -0.46
PTPN20-202ENST00000374339 HMGB2P26583 209 aaKnown RBP12.18□□□□□ -0.46
PTPN20-202ENST00000374339 FAM182BQ5T319 152 aa12.18□□□□□ -0.46
PTPN20-202ENST00000374339 BEND3Q5T5X7 828 aa12.18□□□□□ -0.46
PTPN20-202ENST00000374339 LINS1Q8NG48 757 aa12.18□□□□□ -0.46
PTPN20-202ENST00000374339 KDM2BQ8NHM5 1336 aa12.18□□□□□ -0.46
PTPN20-202ENST00000374339 HDAC1Q13547 482 aaPredicted RBP12.18□□□□□ -0.46
PTPN20-202ENST00000374339 KIF6Q6ZMV9 814 aa12.18□□□□□ -0.46
PTPN20-202ENST00000374339 SP7Q8TDD2 431 aaPredicted RBP12.18□□□□□ -0.46
PTPN20-202ENST00000374339 CCDC87Q9NVE4 849 aa12.18□□□□□ -0.46
PTPN20-202ENST00000374339 PCDHB15Q9Y5E8 787 aa12.18□□□□□ -0.46
PTPN20-202ENST00000374339 AFDNP55196 1824 aaKnown RBP12.17□□□□□ -0.46
PTPN20-202ENST00000374339 IL6STP40189 918 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-202ENST00000374339 PIP4K2AP48426 406 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-202ENST00000374339 REM2Q8IYK8 340 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-202ENST00000374339 MEIS3Q99687 375 aa12.17□□□□□ -0.46
PTPN20-202ENST00000374339 METTL22Q9BUU2 404 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-202ENST00000374339 GNAI2P04899 355 aa12.16□□□□□ -0.46
PTPN20-202ENST00000374339 UBTFL1P0CB47 393 aaPredicted RBP12.16□□□□□ -0.46
PTPN20-202ENST00000374339 CRKLP46109 303 aaKnown RBP12.16□□□□□ -0.46
PTPN20-202ENST00000374339 RPAP2Q8IXW5 612 aaPredicted RBP12.16□□□□□ -0.46
PTPN20-202ENST00000374339 USP44Q9H0E7 712 aa12.16□□□□□ -0.46
PTPN20-202ENST00000374339 ITPK1Q13572 414 aa12.15□□□□□ -0.46
PTPN20-202ENST00000374339 C9orf78Q9NZ63 289 aaPredicted RBP12.15□□□□□ -0.46
PTPN20-202ENST00000374339 RGS17Q9UGC6 210 aaPredicted RBP12.15□□□□□ -0.46
PTPN20-202ENST00000374339 ZBTB1Q9Y2K1 713 aa12.15□□□□□ -0.46
PTPN20-202ENST00000374339 ZNF330Q9Y3S2 320 aaPredicted RBP12.15□□□□□ -0.46
PTPN20-202ENST00000374339 TAF1LQ8IZX4 1826 aa12.15□□□□□ -0.46
PTPN20-202ENST00000374339 CNTNAP4Q9C0A0 1308 aa12.14□□□□□ -0.47
PTPN20-202ENST00000374339 HMMRO75330 724 aa12.14□□□□□ -0.47
PTPN20-202ENST00000374339 IGHDP01880 384 aa12.14□□□□□ -0.47
PTPN20-202ENST00000374339 RC3H1Q5TC82 1133 aaKnown RBP12.14□□□□□ -0.47
PTPN20-202ENST00000374339 INTS5Q6P9B9 1019 aaKnown RBP12.14□□□□□ -0.47
PTPN20-202ENST00000374339 ANKRD44Q8N8A2 993 aa12.14□□□□□ -0.47
PTPN20-202ENST00000374339 MYD88Q99836 296 aa12.14□□□□□ -0.47
PTPN20-202ENST00000374339 CCNL1Q9UK58 526 aaPredicted RBP12.14□□□□□ -0.47
PTPN20-202ENST00000374339 ANKRD36CQ5JPF3 1778 aa12.14□□□□□ -0.47
PTPN20-202ENST00000374339 MAP3K15Q6ZN16 1313 aa12.14□□□□□ -0.47
PTPN20-202ENST00000374339 NEURL1BA8MQ27 555 aa12.13□□□□□ -0.47
PTPN20-202ENST00000374339 ERVV-1B6SEH8 477 aa12.13□□□□□ -0.47
PTPN20-202ENST00000374339 EIF5P55010 431 aaKnown RBP12.13□□□□□ -0.47
PTPN20-202ENST00000374339 CWF19L2Q2TBE0 894 aaKnown RBP12.13□□□□□ -0.47
PTPN20-202ENST00000374339 HSP90AB3PQ58FF7 597 aa12.13□□□□□ -0.47
PTPN20-202ENST00000374339 POTEAQ6S8J7 498 aa12.13□□□□□ -0.47
PTPN20-202ENST00000374339 TTLL7Q6ZT98 887 aa12.13□□□□□ -0.47
PTPN20-202ENST00000374339 PTF1AQ7RTS3 328 aa12.13□□□□□ -0.47
PTPN20-202ENST00000374339 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
PTPN20-202ENST00000374339 ZBTB3Q9H5J0 574 aa12.13□□□□□ -0.47
PTPN20-202ENST00000374339 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
PTPN20-202ENST00000374339 UTYO14607 1347 aa12.13□□□□□ -0.47
PTPN20-202ENST00000374339 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
PTPN20-202ENST00000374339 A0A087WZG4 1122 aa12.12□□□□□ -0.47
PTPN20-202ENST00000374339 GRM8O00222 908 aa12.12□□□□□ -0.47
PTPN20-202ENST00000374339 TRIM37O94972 964 aa12.12□□□□□ -0.47
PTPN20-202ENST00000374339 IGKV5-2P06315 115 aa12.12□□□□□ -0.47
PTPN20-202ENST00000374339 GCKRQ14397 625 aa12.12□□□□□ -0.47
PTPN20-202ENST00000374339 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
PTPN20-202ENST00000374339 CEP85Q6P2H3 762 aa12.12□□□□□ -0.47
PTPN20-202ENST00000374339 LINC00116Q8NCU8 138 aa12.12□□□□□ -0.47
PTPN20-202ENST00000374339 GCC1Q96CN9 775 aa12.12□□□□□ -0.47
PTPN20-202ENST00000374339 NUP98P52948 1817 aa12.11□□□□□ -0.47
PTPN20-202ENST00000374339 C4BP0C0L5 1744 aa12.11□□□□□ -0.47
PTPN20-202ENST00000374339 TRIM28Q13263 835 aaKnown RBP12.11□□□□□ -0.47
PTPN20-202ENST00000374339 TCIRG1Q13488 830 aa12.11□□□□□ -0.47
PTPN20-202ENST00000374339 GIGYF2Q6Y7W6 1299 aaKnown RBP12.11□□□□□ -0.47
PTPN20-202ENST00000374339 DZIP3Q86Y13 1208 aaKnown RBP12.11□□□□□ -0.47
PTPN20-202ENST00000374339 CCDC191Q8NCU4 936 aa12.11□□□□□ -0.47
PTPN20-202ENST00000374339 ARXQ96QS3 562 aa12.11□□□□□ -0.47
PTPN20-202ENST00000374339 LRRFIP2Q9Y608 721 aaKnown RBP12.11□□□□□ -0.47
PTPN20-202ENST00000374339 RGPD3A6NKT7 1758 aaPredicted RBP12.11□□□□□ -0.47
PTPN20-202ENST00000374339 RGPD4Q7Z3J3 1758 aa12.11□□□□□ -0.47
PTPN20-202ENST00000374339 COL15A1P39059 1388 aa12.11□□□□□ -0.47
PTPN20-202ENST00000374339 BCORQ6W2J9 1755 aa12.1□□□□□ -0.47
PTPN20-202ENST00000374339 RGL2O15211 777 aa12.1□□□□□ -0.47
PTPN20-202ENST00000374339 NBPF7P0C2Y1 421 aaPredicted RBP12.1□□□□□ -0.47
PTPN20-202ENST00000374339 SMC5Q8IY18 1101 aa12.1□□□□□ -0.47
PTPN20-202ENST00000374339 CWC25Q9NXE8 425 aaPredicted RBP12.1□□□□□ -0.47
PTPN20-202ENST00000374339 ATP5J2-PTCD1G3V325 749 aa12.09□□□□□ -0.47
PTPN20-202ENST00000374339 PLSCR1O15162 318 aa12.09□□□□□ -0.47
PTPN20-202ENST00000374339 ATP8B2P98198 1209 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms