RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 CCDC30Q5VVM6 783 aa20.61■□□□□ 0.89
HDHD3-202ENST00000374180 TBC1D9BQ66K14 1250 aa20.61■□□□□ 0.89
HDHD3-202ENST00000374180 SYT17Q9BSW7 474 aa20.61■□□□□ 0.89
HDHD3-202ENST00000374180 ERVV-1B6SEH8 477 aa20.6■□□□□ 0.89
HDHD3-202ENST00000374180 HNRNPUQ00839 825 aaKnown RBP eCLIP20.6■□□□□ 0.89
HDHD3-202ENST00000374180 DDR1Q08345 913 aa20.6■□□□□ 0.89
HDHD3-202ENST00000374180 AIMP1Q12904 312 aaKnown RBP20.6■□□□□ 0.89
HDHD3-202ENST00000374180 COPS6Q7L5N1 327 aa20.6■□□□□ 0.89
HDHD3-202ENST00000374180 HYPKQ9NX55 129 aa20.6■□□□□ 0.89
HDHD3-202ENST00000374180 MAP3K15Q6ZN16 1313 aa20.6■□□□□ 0.89
HDHD3-202ENST00000374180 POLRMTO00411 1230 aaKnown RBP20.59■□□□□ 0.89
HDHD3-202ENST00000374180 RGL2O15211 777 aa20.59■□□□□ 0.89
HDHD3-202ENST00000374180 HLFQ16534 295 aa20.59■□□□□ 0.89
HDHD3-202ENST00000374180 XAGE3Q8WTP9 111 aa20.59■□□□□ 0.89
HDHD3-202ENST00000374180 SLFN5Q08AF3 891 aa20.58■□□□□ 0.89
HDHD3-202ENST00000374180 SETDB2Q96T68 719 aa20.58■□□□□ 0.89
HDHD3-202ENST00000374180 ZBTB3Q9H5J0 574 aa20.58■□□□□ 0.89
HDHD3-202ENST00000374180 CD2APQ9Y5K6 639 aa20.58■□□□□ 0.89
HDHD3-202ENST00000374180 CDCA7LQ96GN5 454 aa20.57■□□□□ 0.88
HDHD3-202ENST00000374180 VAMP4O75379 141 aa20.56■□□□□ 0.88
HDHD3-202ENST00000374180 SERPINB2P05120 415 aa20.56■□□□□ 0.88
HDHD3-202ENST00000374180 STK31Q9BXU1 1019 aa20.56■□□□□ 0.88
HDHD3-202ENST00000374180 TCERG1O14776 1098 aaKnown RBP20.55■□□□□ 0.88
HDHD3-202ENST00000374180 GIGYF2Q6Y7W6 1299 aaKnown RBP20.55■□□□□ 0.88
HDHD3-202ENST00000374180 NIP7Q9Y221 180 aaKnown RBP eCLIP20.55■□□□□ 0.88
HDHD3-202ENST00000374180 SCN7AQ01118 1682 aa20.54■□□□□ 0.88
HDHD3-202ENST00000374180 CARMIL3Q8ND23 1372 aa20.54■□□□□ 0.88
HDHD3-202ENST00000374180 ANKRD13DQ6ZTN6 518 aa20.53■□□□□ 0.88
HDHD3-202ENST00000374180 NLGN2Q8NFZ4 835 aa20.53■□□□□ 0.88
HDHD3-202ENST00000374180 PHAXQ9H814 394 aaKnown RBP20.53■□□□□ 0.88
HDHD3-202ENST00000374180 NPHP1O15259 732 aa20.52■□□□□ 0.88
HDHD3-202ENST00000374180 SLC4A2P04920 1241 aa20.52■□□□□ 0.88
HDHD3-202ENST00000374180 TRMT2AQ8IZ69 625 aaKnown RBP20.52■□□□□ 0.88
HDHD3-202ENST00000374180 PLBD2Q8NHP8 589 aa20.52■□□□□ 0.88
HDHD3-202ENST00000374180 BCORQ6W2J9 1755 aa20.51■□□□□ 0.87
HDHD3-202ENST00000374180 GPTP24298 496 aa20.5■□□□□ 0.87
HDHD3-202ENST00000374180 NBPF5PQ86XG9 351 aaPredicted RBP20.5■□□□□ 0.87
HDHD3-202ENST00000374180 GOLGB1Q14789 3259 aaKnown RBP20.5■□□□□ 0.87
HDHD3-202ENST00000374180 TGFB2P61812 414 aa20.5■□□□□ 0.87
HDHD3-202ENST00000374180 HSP90AB3PQ58FF7 597 aa20.5■□□□□ 0.87
HDHD3-202ENST00000374180 TPTE2Q6XPS3 522 aa20.5■□□□□ 0.87
HDHD3-202ENST00000374180 CNBD1Q8NA66 436 aa20.5■□□□□ 0.87
HDHD3-202ENST00000374180 C10orf71Q711Q0 1435 aa20.49■□□□□ 0.87
HDHD3-202ENST00000374180 FAM177BA6PVY3 158 aa20.49■□□□□ 0.87
HDHD3-202ENST00000374180 DDX58O95786 925 aaKnown RBP20.49■□□□□ 0.87
HDHD3-202ENST00000374180 PRR5LQ6MZQ0 368 aa20.49■□□□□ 0.87
HDHD3-202ENST00000374180 RIC3Q7Z5B4 369 aa20.49■□□□□ 0.87
HDHD3-202ENST00000374180 ZNF34Q8IZ26 560 aa20.49■□□□□ 0.87
HDHD3-202ENST00000374180 ATP10DQ9P241 1426 aa20.48■□□□□ 0.87
HDHD3-202ENST00000374180 TCIRG1Q13488 830 aa20.48■□□□□ 0.87
HDHD3-202ENST00000374180 A0A0G2JLW4 131 aa20.47■□□□□ 0.87
HDHD3-202ENST00000374180 DCAF8L1A6NGE4 600 aa20.47■□□□□ 0.87
HDHD3-202ENST00000374180 GTF2E1P29083 439 aaPredicted RBP20.47■□□□□ 0.87
HDHD3-202ENST00000374180 CCDC24Q8N4L8 307 aa20.47■□□□□ 0.87
HDHD3-202ENST00000374180 NUP98P52948 1817 aa20.47■□□□□ 0.87
HDHD3-202ENST00000374180 ST5P78524 1137 aa20.46■□□□□ 0.87
HDHD3-202ENST00000374180 PARP10Q53GL7 1025 aa20.46■□□□□ 0.87
HDHD3-202ENST00000374180 G2E3Q7L622 706 aa20.46■□□□□ 0.87
HDHD3-202ENST00000374180 NYXQ9GZU5 481 aa20.46■□□□□ 0.87
HDHD3-202ENST00000374180 ZBED9Q6R2W3 1325 aa20.45■□□□□ 0.86
HDHD3-202ENST00000374180 UBN2Q6ZU65 1347 aa20.45■□□□□ 0.86
HDHD3-202ENST00000374180 SUSD4Q5VX71 490 aa20.45■□□□□ 0.86
HDHD3-202ENST00000374180 PPP1R42Q7Z4L9 355 aa20.45■□□□□ 0.86
HDHD3-202ENST00000374180 BRIP1Q9BX63 1249 aa20.45■□□□□ 0.86
HDHD3-202ENST00000374180 AFDNP55196 1824 aaKnown RBP20.45■□□□□ 0.86
HDHD3-202ENST00000374180 DPEP1P16444 411 aa20.44■□□□□ 0.86
HDHD3-202ENST00000374180 FLIIQ13045 1269 aa20.44■□□□□ 0.86
HDHD3-202ENST00000374180 NRXN2Q9P2S2 1712 aa20.44■□□□□ 0.86
HDHD3-202ENST00000374180 PI4KAP2A4QPH2 592 aa20.43■□□□□ 0.86
HDHD3-202ENST00000374180 PDE6BP35913 854 aa20.43■□□□□ 0.86
HDHD3-202ENST00000374180 KSR2Q6VAB6 950 aa20.43■□□□□ 0.86
HDHD3-202ENST00000374180 NLRP10Q86W26 655 aa20.43■□□□□ 0.86
HDHD3-202ENST00000374180 PELP1Q8IZL8 1130 aaKnown RBP20.43■□□□□ 0.86
HDHD3-202ENST00000374180 PI4KAP1Q8N8J0 262 aa20.43■□□□□ 0.86
HDHD3-202ENST00000374180 ZNF428Q96B54 188 aa20.43■□□□□ 0.86
HDHD3-202ENST00000374180 ATP5J2-PTCD1G3V325 749 aa20.43■□□□□ 0.86
HDHD3-202ENST00000374180 CT47B1P0C2W7 299 aaPredicted RBP20.43■□□□□ 0.86
HDHD3-202ENST00000374180 GPR162Q16538 588 aa20.43■□□□□ 0.86
HDHD3-202ENST00000374180 MAP3K2Q9Y2U5 619 aa20.43■□□□□ 0.86
HDHD3-202ENST00000374180 PXDNLA1KZ92 1463 aa20.42■□□□□ 0.86
HDHD3-202ENST00000374180 KIF13BQ9NQT8 1826 aa20.42■□□□□ 0.86
HDHD3-202ENST00000374180 UTRNP46939 3433 aa20.42■□□□□ 0.86
HDHD3-202ENST00000374180 H0YIN7 160 aa20.42■□□□□ 0.86
HDHD3-202ENST00000374180 CHRNA5P30532 468 aa20.42■□□□□ 0.86
HDHD3-202ENST00000374180 FKBP5Q13451 457 aaPredicted RBP20.42■□□□□ 0.86
HDHD3-202ENST00000374180 NUTM1Q86Y26 1132 aa20.42■□□□□ 0.86
HDHD3-202ENST00000374180 ISCA1Q9BUE6 129 aa20.42■□□□□ 0.86
HDHD3-202ENST00000374180 UTP14AQ9BVJ6 771 aaKnown RBP20.42■□□□□ 0.86
HDHD3-202ENST00000374180 WWC3Q9ULE0 1092 aa20.42■□□□□ 0.86
HDHD3-202ENST00000374180 C2CD5Q86YS7 1000 aa20.41■□□□□ 0.86
HDHD3-202ENST00000374180 MYD88Q99836 296 aa20.41■□□□□ 0.86
HDHD3-202ENST00000374180 METTL22Q9BUU2 404 aaPredicted RBP20.41■□□□□ 0.86
HDHD3-202ENST00000374180 PDZRN3Q9UPQ7 1066 aa20.41■□□□□ 0.86
HDHD3-202ENST00000374180 NTSR2O95665 410 aa20.4■□□□□ 0.86
HDHD3-202ENST00000374180 KCNA3P22001 575 aa20.4■□□□□ 0.86
HDHD3-202ENST00000374180 TRIM28Q13263 835 aaKnown RBP20.4■□□□□ 0.86
HDHD3-202ENST00000374180 ERFEQ4G0M1 354 aa20.4■□□□□ 0.86
HDHD3-202ENST00000374180 SSH1Q8WYL5 1049 aa20.4■□□□□ 0.86
HDHD3-202ENST00000374180 PIM2Q9P1W9 311 aa20.4■□□□□ 0.86
HDHD3-202ENST00000374180 TRMT112Q9UI30 125 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms