RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 FAM200AQ8TCP9 573 aa19.1■□□□□ 0.65
PBX3-204ENST00000373489 TRERF1Q96PN7 1200 aa19.1■□□□□ 0.65
PBX3-204ENST00000373489 RUFY3Q7L099 469 aa19.1■□□□□ 0.65
PBX3-204ENST00000373489 CCDC83Q8IWF9 413 aa19.1■□□□□ 0.65
PBX3-204ENST00000373489 FAM173BQ6P4H8 233 aa19.1■□□□□ 0.65
PBX3-204ENST00000373489 IL1RAPL2Q9NP60 686 aa19.1■□□□□ 0.65
PBX3-204ENST00000373489 HSPA4P34932 840 aa19.09■□□□□ 0.65
PBX3-204ENST00000373489 ZSCAN25Q6NSZ9 544 aa19.09■□□□□ 0.65
PBX3-204ENST00000373489 AEBP1Q8IUX7 1158 aa19.09■□□□□ 0.65
PBX3-204ENST00000373489 RASEFQ8IZ41 740 aa19.09■□□□□ 0.65
PBX3-204ENST00000373489 ATP6V1DQ9Y5K8 247 aa19.09■□□□□ 0.65
PBX3-204ENST00000373489 MRVI1Q9Y6F6 885 aa19.09■□□□□ 0.65
PBX3-204ENST00000373489 PNMA6EA0A0J9YXQ4 647 aa19.09■□□□□ 0.65
PBX3-204ENST00000373489 KMT5BQ4FZB7 885 aa19.09■□□□□ 0.65
PBX3-204ENST00000373489 DDX54Q8TDD1 881 aaKnown RBP19.09■□□□□ 0.65
PBX3-204ENST00000373489 LIG1P18858 919 aa19.08■□□□□ 0.65
PBX3-204ENST00000373489 GJB2P29033 226 aa19.08■□□□□ 0.65
PBX3-204ENST00000373489 TYRO3Q06418 890 aa19.08■□□□□ 0.65
PBX3-204ENST00000373489 FERMT3Q86UX7 667 aa19.08■□□□□ 0.65
PBX3-204ENST00000373489 KRT222Q8N1A0 295 aa19.08■□□□□ 0.65
PBX3-204ENST00000373489 RTF1Q92541 710 aaKnown RBP19.08■□□□□ 0.65
PBX3-204ENST00000373489 SALL3Q9BXA9 1300 aa19.08■□□□□ 0.64
PBX3-204ENST00000373489 EIF4A2Q14240 407 aaKnown RBP19.08■□□□□ 0.64
PBX3-204ENST00000373489 ANO6Q4KMQ2 910 aa19.08■□□□□ 0.64
PBX3-204ENST00000373489 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.08■□□□□ 0.64
PBX3-204ENST00000373489 SNX14Q9Y5W7 946 aa19.08■□□□□ 0.64
PBX3-204ENST00000373489 TTC21BQ7Z4L5 1316 aa19.07■□□□□ 0.64
PBX3-204ENST00000373489 NUTM1Q86Y26 1132 aa19.07■□□□□ 0.64
PBX3-204ENST00000373489 CACTINQ8WUQ7 758 aaKnown RBP19.07■□□□□ 0.64
PBX3-204ENST00000373489 CBX8Q9HC52 389 aa19.07■□□□□ 0.64
PBX3-204ENST00000373489 LIMCH1Q9UPQ0 1083 aa19.07■□□□□ 0.64
PBX3-204ENST00000373489 MAP3K11Q16584 847 aa19.07■□□□□ 0.64
PBX3-204ENST00000373489 ZNF215Q9UL58 517 aaPredicted RBP19.07■□□□□ 0.64
PBX3-204ENST00000373489 SYCP1Q15431 976 aa19.06■□□□□ 0.64
PBX3-204ENST00000373489 CEP135Q66GS9 1140 aa19.06■□□□□ 0.64
PBX3-204ENST00000373489 SULT6B1Q6IMI4 303 aa19.06■□□□□ 0.64
PBX3-204ENST00000373489 MTMR6Q9Y217 621 aa19.06■□□□□ 0.64
PBX3-204ENST00000373489 ACEP12821 1306 aa19.06■□□□□ 0.64
PBX3-204ENST00000373489 CCDC66A2RUB6 948 aa19.06■□□□□ 0.64
PBX3-204ENST00000373489 NPHP4O75161 1426 aaPredicted RBP19.06■□□□□ 0.64
PBX3-204ENST00000373489 NUP62CLQ9H1M0 184 aa19.06■□□□□ 0.64
PBX3-204ENST00000373489 PAXBP1Q9Y5B6 917 aa19.06■□□□□ 0.64
PBX3-204ENST00000373489 USP27XA6NNY8 438 aa19.05■□□□□ 0.64
PBX3-204ENST00000373489 GNAI2P04899 355 aa19.05■□□□□ 0.64
PBX3-204ENST00000373489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.05■□□□□ 0.64
PBX3-204ENST00000373489 ARID5BQ14865 1188 aa19.05■□□□□ 0.64
PBX3-204ENST00000373489 RBM33Q96EV2 1170 aaKnown RBP19.05■□□□□ 0.64
PBX3-204ENST00000373489 TIGD1Q96MW7 591 aa19.05■□□□□ 0.64
PBX3-204ENST00000373489 XRN1Q8IZH2 1706 aaKnown RBP19.04■□□□□ 0.64
PBX3-204ENST00000373489 CCDC144BQ3MJ40 725 aa19.04■□□□□ 0.64
PBX3-204ENST00000373489 TTC6Q86TZ1 520 aa19.04■□□□□ 0.64
PBX3-204ENST00000373489 CCDC144CPQ8IYA2 1237 aa19.04■□□□□ 0.64
PBX3-204ENST00000373489 TTC14Q96N46 770 aa19.04■□□□□ 0.64
PBX3-204ENST00000373489 SPG7Q9UQ90 795 aa19.04■□□□□ 0.64
PBX3-204ENST00000373489 NRKQ7Z2Y5 1582 aa19.04■□□□□ 0.64
PBX3-204ENST00000373489 PTPRCP08575 1304 aa19.04■□□□□ 0.64
PBX3-204ENST00000373489 CASTP20810 708 aaKnown RBP19.04■□□□□ 0.64
PBX3-204ENST00000373489 ZNF75DP51815 510 aa19.04■□□□□ 0.64
PBX3-204ENST00000373489 TNMDQ9H2S6 317 aa19.04■□□□□ 0.64
PBX3-204ENST00000373489 CLIP2Q9UDT6 1046 aa19.04■□□□□ 0.64
PBX3-204ENST00000373489 ELF2Q15723 593 aa19.03■□□□□ 0.64
PBX3-204ENST00000373489 NECAB1Q8N987 351 aa19.03■□□□□ 0.64
PBX3-204ENST00000373489 TRMT1Q9NXH9 659 aaKnown RBP19.03■□□□□ 0.64
PBX3-204ENST00000373489 DACT1Q9NYF0 836 aa19.03■□□□□ 0.64
PBX3-204ENST00000373489 KIAA0232Q92628 1395 aa19.03■□□□□ 0.64
PBX3-204ENST00000373489 FBXO38Q6PIJ6 1188 aa19.03■□□□□ 0.64
PBX3-204ENST00000373489 ZNF397Q8NF99 534 aaPredicted RBP19.03■□□□□ 0.64
PBX3-204ENST00000373489 IPO4Q8TEX9 1081 aaKnown RBP19.03■□□□□ 0.64
PBX3-204ENST00000373489 OVOS2A0A0J9YW53 1432 aa19.02■□□□□ 0.63
PBX3-204ENST00000373489 OVOS2Q6IE36 1432 aa19.02■□□□□ 0.63
PBX3-204ENST00000373489 PLEKHG3A1L390 1219 aa19.02■□□□□ 0.63
PBX3-204ENST00000373489 HSP90AB2PQ58FF8 381 aa19.02■□□□□ 0.63
PBX3-204ENST00000373489 NECTIN2Q92692 538 aa19.02■□□□□ 0.63
PBX3-204ENST00000373489 TFIP11Q9UBB9 837 aaKnown RBP19.02■□□□□ 0.63
PBX3-204ENST00000373489 RBM6P78332 1123 aaKnown RBP19.01■□□□□ 0.63
PBX3-204ENST00000373489 CWC27Q6UX04 472 aaKnown RBP19.01■□□□□ 0.63
PBX3-204ENST00000373489 SSH2Q76I76 1423 aa19.01■□□□□ 0.63
PBX3-204ENST00000373489 CHL1O00533 1208 aa19.01■□□□□ 0.63
PBX3-204ENST00000373489 DNAJC25Q9H1X3 360 aa19.01■□□□□ 0.63
PBX3-204ENST00000373489 GOLGA6L4A6NEF3 574 aa19■□□□□ 0.63
PBX3-204ENST00000373489 PLA2G4DQ86XP0 818 aa19■□□□□ 0.63
PBX3-204ENST00000373489 RAD50Q92878 1312 aa19■□□□□ 0.63
PBX3-204ENST00000373489 TOPAZ1Q8N9V7 1692 aa19■□□□□ 0.63
PBX3-204ENST00000373489 USP6P35125 1406 aa19■□□□□ 0.63
PBX3-204ENST00000373489 HAP1P54257 671 aaPredicted RBP18.99■□□□□ 0.63
PBX3-204ENST00000373489 PEAK1Q9H792 1746 aa18.99■□□□□ 0.63
PBX3-204ENST00000373489 SOX12O15370 315 aa18.99■□□□□ 0.63
PBX3-204ENST00000373489 ZNF165P49910 485 aa18.99■□□□□ 0.63
PBX3-204ENST00000373489 CCT4P50991 539 aaKnown RBP18.98■□□□□ 0.63
PBX3-204ENST00000373489 PTPN14Q15678 1187 aa18.98■□□□□ 0.63
PBX3-204ENST00000373489 ADCK5Q3MIX3 580 aa18.98■□□□□ 0.63
PBX3-204ENST00000373489 IL17RAQ96F46 866 aa18.98■□□□□ 0.63
PBX3-204ENST00000373489 HYPKQ9NX55 129 aa18.98■□□□□ 0.63
PBX3-204ENST00000373489 CHD2O14647 1828 aaKnown RBP18.98■□□□□ 0.63
PBX3-204ENST00000373489 SGSM2O43147 1006 aa18.98■□□□□ 0.63
PBX3-204ENST00000373489 CAPN2P17655 700 aa18.98■□□□□ 0.63
PBX3-204ENST00000373489 LARP1BQ659C4 914 aaKnown RBP18.98■□□□□ 0.63
PBX3-204ENST00000373489 STAP2Q9UGK3 403 aa18.98■□□□□ 0.63
PBX3-204ENST00000373489 LRRFIP2Q9Y608 721 aaKnown RBP18.98■□□□□ 0.63
PBX3-204ENST00000373489 KRT85P78386 507 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms