RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 LRCH2Q5VUJ6 765 aa9.84□□□□□ -0.83
GARNL3-201ENST00000373386 THUMPD2Q9BTF0 503 aaKnown RBP9.84□□□□□ -0.83
GARNL3-201ENST00000373386 C1orf115Q9H7X2 142 aa9.84□□□□□ -0.83
GARNL3-201ENST00000373386 GOLGA6L22H0YM25 854 aa9.84□□□□□ -0.83
GARNL3-201ENST00000373386 BRD1O95696 1058 aa9.84□□□□□ -0.83
GARNL3-201ENST00000373386 FBLN1P23142 703 aa9.84□□□□□ -0.83
GARNL3-201ENST00000373386 ZC3H12AQ5D1E8 599 aaKnown RBP9.84□□□□□ -0.83
GARNL3-201ENST00000373386 SULT6B1Q6IMI4 303 aa9.84□□□□□ -0.83
GARNL3-201ENST00000373386 GAS2L2Q8NHY3 880 aa9.84□□□□□ -0.83
GARNL3-201ENST00000373386 SLC26A8Q96RN1 970 aa9.84□□□□□ -0.83
GARNL3-201ENST00000373386 OSBPL3Q9H4L5 887 aa9.84□□□□□ -0.83
GARNL3-201ENST00000373386 KIF3CO14782 793 aa9.83□□□□□ -0.84
GARNL3-201ENST00000373386 TBC1D9Q6ZT07 1266 aa9.83□□□□□ -0.84
GARNL3-201ENST00000373386 PLEKHM2Q8IWE5 1019 aa9.83□□□□□ -0.84
GARNL3-201ENST00000373386 NUB1Q9Y5A7 615 aa9.83□□□□□ -0.84
GARNL3-201ENST00000373386 MED1Q15648 1581 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-201ENST00000373386 ZNF142P52746 1687 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-201ENST00000373386 RGPD8O14715 1765 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-201ENST00000373386 LTKP29376 864 aa9.83□□□□□ -0.84
GARNL3-201ENST00000373386 CCT4P50991 539 aaKnown RBP9.83□□□□□ -0.84
GARNL3-201ENST00000373386 GABPB1Q06547 395 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-201ENST00000373386 TTC22Q5TAA0 569 aa9.83□□□□□ -0.84
GARNL3-201ENST00000373386 MED4Q9NPJ6 270 aa9.83□□□□□ -0.84
GARNL3-201ENST00000373386 IBTKQ9P2D0 1353 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-201ENST00000373386 PPP1R12AO14974 1030 aaPredicted RBP9.82□□□□□ -0.84
GARNL3-201ENST00000373386 LIG1P18858 919 aa9.82□□□□□ -0.84
GARNL3-201ENST00000373386 KLHL33A6NCF5 533 aa9.82□□□□□ -0.84
GARNL3-201ENST00000373386 EPB41L2O43491 1005 aaKnown RBP9.82□□□□□ -0.84
GARNL3-201ENST00000373386 ICE2Q659A1 982 aa9.82□□□□□ -0.84
GARNL3-201ENST00000373386 CEP85Q6P2H3 762 aa9.82□□□□□ -0.84
GARNL3-201ENST00000373386 CTAGE5O15320 804 aa9.82□□□□□ -0.84
GARNL3-201ENST00000373386 HMMRO75330 724 aa9.82□□□□□ -0.84
GARNL3-201ENST00000373386 MSNP26038 577 aaKnown RBP9.82□□□□□ -0.84
GARNL3-201ENST00000373386 RABEP1Q15276 862 aa9.82□□□□□ -0.84
GARNL3-201ENST00000373386 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
GARNL3-201ENST00000373386 CEP170BQ9Y4F5 1589 aaPredicted RBP9.81□□□□□ -0.84
GARNL3-201ENST00000373386 ADGRL3Q9HAR2 1447 aa9.81□□□□□ -0.84
GARNL3-201ENST00000373386 FAM83GA6ND36 823 aa9.81□□□□□ -0.84
GARNL3-201ENST00000373386 BIRC2Q13490 618 aa9.81□□□□□ -0.84
GARNL3-201ENST00000373386 ZSCAN30Q86W11 494 aa9.81□□□□□ -0.84
GARNL3-201ENST00000373386 NME8Q8N427 588 aa9.81□□□□□ -0.84
GARNL3-201ENST00000373386 IL17RAQ96F46 866 aa9.81□□□□□ -0.84
GARNL3-201ENST00000373386 ANAPC4Q9UJX5 808 aa9.81□□□□□ -0.84
GARNL3-201ENST00000373386 CHD2O14647 1828 aaKnown RBP9.81□□□□□ -0.84
GARNL3-201ENST00000373386 COQ9O75208 318 aa9.81□□□□□ -0.84
GARNL3-201ENST00000373386 NOP2P46087 812 aaKnown RBP9.81□□□□□ -0.84
GARNL3-201ENST00000373386 SUDS3Q9H7L9 328 aaPredicted RBP9.81□□□□□ -0.84
GARNL3-201ENST00000373386 MAP3K19Q56UN5 1328 aa9.81□□□□□ -0.84
GARNL3-201ENST00000373386 MSH6P52701 1360 aa9.81□□□□□ -0.84
GARNL3-201ENST00000373386 CCDC173Q0VFZ6 552 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 NOL8Q76FK4 1167 aaKnown RBP9.8□□□□□ -0.84
GARNL3-201ENST00000373386 IPO7O95373 1038 aaKnown RBP9.8□□□□□ -0.84
GARNL3-201ENST00000373386 GSPT1P15170 499 aaKnown RBP9.8□□□□□ -0.84
GARNL3-201ENST00000373386 GUCY2CP25092 1073 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 GAS2L3Q86XJ1 694 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 THEMISQ8N1K5 641 aaPredicted RBP9.8□□□□□ -0.84
GARNL3-201ENST00000373386 SMC3Q9UQE7 1217 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 LMO7Q8WWI1 1683 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 OVOS2A0A0G2JMS6 1433 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 KDM3BQ7LBC6 1761 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 SSFA2P28290 1259 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 CSPP1Q1MSJ5 1256 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 HSP90AB2PQ58FF8 381 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 SASS6Q6UVJ0 657 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 JMYQ8N9B5 988 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 KDM4CQ9H3R0 1056 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 AMOTL2Q9Y2J4 779 aa9.8□□□□□ -0.84
GARNL3-201ENST00000373386 CAMTA1Q9Y6Y1 1673 aa9.79□□□□□ -0.84
GARNL3-201ENST00000373386 CD2BP2O95400 341 aaKnown RBP9.79□□□□□ -0.84
GARNL3-201ENST00000373386 KLHL40Q2TBA0 621 aa9.79□□□□□ -0.84
GARNL3-201ENST00000373386 UVSSAQ2YD98 709 aa9.79□□□□□ -0.84
GARNL3-201ENST00000373386 C1QTNF12Q5T7M4 302 aa9.79□□□□□ -0.84
GARNL3-201ENST00000373386 PROCA1Q8NCQ7 364 aaPredicted RBP9.79□□□□□ -0.84
GARNL3-201ENST00000373386 ATL2Q8NHH9 583 aa9.79□□□□□ -0.84
GARNL3-201ENST00000373386 RTF1Q92541 710 aaKnown RBP9.79□□□□□ -0.84
GARNL3-201ENST00000373386 NUCKS1Q9H1E3 243 aaKnown RBP9.79□□□□□ -0.84
GARNL3-201ENST00000373386 AOX1Q06278 1338 aa9.79□□□□□ -0.84
GARNL3-201ENST00000373386 LTN1O94822 1766 aa9.79□□□□□ -0.84
GARNL3-201ENST00000373386 NCAPD2Q15021 1401 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 CCDC189A1A4V9 331 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 NFAT5O94916 1531 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 TNNT1P13805 278 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 PPP1R9BQ96SB3 815 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 MTA3Q9BTC8 594 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 SENP3Q9H4L4 574 aaPredicted RBP9.78□□□□□ -0.84
GARNL3-201ENST00000373386 SUFUQ9UMX1 484 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 RPS6KL1Q9Y6S9 549 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 TPM3P06753 285 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 HOXB7P09629 217 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 NUCB2P80303 420 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 DCTN1Q14203 1278 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 MTHFSDQ2M296 383 aaKnown RBP9.78□□□□□ -0.84
GARNL3-201ENST00000373386 NOL10Q9BSC4 688 aaKnown RBP9.78□□□□□ -0.84
GARNL3-201ENST00000373386 USP26Q9BXU7 913 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 FOXD4L1Q9NU39 408 aa9.78□□□□□ -0.84
GARNL3-201ENST00000373386 MAP3K5Q99683 1374 aa9.77□□□□□ -0.85
GARNL3-201ENST00000373386 SALL3Q9BXA9 1300 aa9.77□□□□□ -0.85
GARNL3-201ENST00000373386 BAG4O95429 457 aaKnown RBP9.77□□□□□ -0.85
GARNL3-201ENST00000373386 NASPP49321 788 aaPredicted RBP9.77□□□□□ -0.85
GARNL3-201ENST00000373386 CCT2P78371 535 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms