RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 EPS15P42566 896 aa12.75□□□□□ -0.37
CSMD2-204ENST00000373380 METTL24Q5JXM2 366 aa12.75□□□□□ -0.37
CSMD2-204ENST00000373380 AK7Q96M32 723 aa12.75□□□□□ -0.37
CSMD2-204ENST00000373380 UBAC1Q9BSL1 405 aa12.75□□□□□ -0.37
CSMD2-204ENST00000373380 TRMT1Q9NXH9 659 aaKnown RBP12.75□□□□□ -0.37
CSMD2-204ENST00000373380 IKQ13123 557 aaPredicted RBP12.75□□□□□ -0.37
CSMD2-204ENST00000373380 ZSCAN25Q6NSZ9 544 aa12.75□□□□□ -0.37
CSMD2-204ENST00000373380 TRMT2AQ8IZ69 625 aaKnown RBP12.75□□□□□ -0.37
CSMD2-204ENST00000373380 CDKL5O76039 1030 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 SFPQP23246 707 aaKnown RBP eCLIP12.74□□□□□ -0.37
CSMD2-204ENST00000373380 PTPN14Q15678 1187 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 ZGPATQ8N5A5 531 aaKnown RBP12.74□□□□□ -0.37
CSMD2-204ENST00000373380 SNRKQ9NRH2 765 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 LRP2BPQ9P2M1 347 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 MAGEC2Q9UBF1 373 aaPredicted RBP12.74□□□□□ -0.37
CSMD2-204ENST00000373380 MADDQ8WXG6 1647 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 AIDAQ96BJ3 306 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 GNL3LQ9NVN8 582 aaKnown RBP12.74□□□□□ -0.37
CSMD2-204ENST00000373380 CGNQ9P2M7 1197 aaKnown RBP12.74□□□□□ -0.37
CSMD2-204ENST00000373380 HSP90AB3PQ58FF7 597 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 SNX21Q969T3 373 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 C8orf76Q96K31 380 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 CLTCL1P53675 1640 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 BIN1O00499 593 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 EVI5LQ96CN4 794 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 CCDC43Q96MW1 224 aaKnown RBP12.74□□□□□ -0.37
CSMD2-204ENST00000373380 CLIP2Q9UDT6 1046 aa12.74□□□□□ -0.37
CSMD2-204ENST00000373380 ZNF165P49910 485 aa12.73□□□□□ -0.37
CSMD2-204ENST00000373380 UBXN4Q92575 508 aa12.73□□□□□ -0.37
CSMD2-204ENST00000373380 CDK5RAP3Q96JB5 506 aa12.73□□□□□ -0.37
CSMD2-204ENST00000373380 TRERF1Q96PN7 1200 aa12.73□□□□□ -0.37
CSMD2-204ENST00000373380 ESYT1Q9BSJ8 1104 aa12.73□□□□□ -0.37
CSMD2-204ENST00000373380 SLC3A2P08195 630 aaKnown RBP12.73□□□□□ -0.37
CSMD2-204ENST00000373380 RDXP35241 583 aaKnown RBP12.73□□□□□ -0.37
CSMD2-204ENST00000373380 CLCN1P35523 988 aa12.73□□□□□ -0.37
CSMD2-204ENST00000373380 AMOTQ4VCS5 1084 aa12.73□□□□□ -0.37
CSMD2-204ENST00000373380 ANO10Q9NW15 660 aa12.73□□□□□ -0.37
CSMD2-204ENST00000373380 RAI14Q9P0K7 980 aa12.73□□□□□ -0.37
CSMD2-204ENST00000373380 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
CSMD2-204ENST00000373380 ATP2B2Q01814 1243 aa12.73□□□□□ -0.37
CSMD2-204ENST00000373380 AXDND1Q5T1B0 1012 aaPredicted RBP12.73□□□□□ -0.37
CSMD2-204ENST00000373380 RAB11FIP4Q86YS3 637 aa12.73□□□□□ -0.37
CSMD2-204ENST00000373380 DCTPP1Q9H773 170 aa12.73□□□□□ -0.37
CSMD2-204ENST00000373380 KLHL10Q6JEL2 608 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 GOLIM4O00461 696 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 CBFA2T2O43439 604 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 UBE2HP62256 183 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 LRSAM1Q6UWE0 723 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 ZBTB3Q9H5J0 574 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 ZNHIT6Q9NWK9 470 aaKnown RBP12.72□□□□□ -0.37
CSMD2-204ENST00000373380 CTDP1Q9Y5B0 961 aaPredicted RBP12.72□□□□□ -0.37
CSMD2-204ENST00000373380 TTC21BQ7Z4L5 1316 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 E9PCH4 1651 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 HAND2P61296 217 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 FSIP1Q8NA03 581 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 LRRC2Q9BYS8 371 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 DACH1Q9UI36 760 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 CNPY2Q9Y2B0 182 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 SPHKAPQ2M3C7 1700 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 NPATQ14207 1427 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 SMTNL1A8MU46 457 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 TNNT1P13805 278 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 EIF4A2Q14240 407 aaKnown RBP12.72□□□□□ -0.37
CSMD2-204ENST00000373380 LEKR1Q6ZMV7 388 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 PLEKHM2Q8IWE5 1019 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 HYPKQ9NX55 129 aa12.72□□□□□ -0.37
CSMD2-204ENST00000373380 UGGT1Q9NYU2 1555 aa12.71□□□□□ -0.37
CSMD2-204ENST00000373380 MINDY4BA8MYZ0 360 aa12.71□□□□□ -0.37
CSMD2-204ENST00000373380 PIP4K2AP48426 406 aaPredicted RBP12.71□□□□□ -0.37
CSMD2-204ENST00000373380 ERCC4Q92889 916 aaPredicted RBP12.71□□□□□ -0.37
CSMD2-204ENST00000373380 POGZQ7Z3K3 1410 aa12.71□□□□□ -0.37
CSMD2-204ENST00000373380 USP48Q86UV5 1035 aa12.71□□□□□ -0.37
CSMD2-204ENST00000373380 CHPF2Q9P2E5 772 aa12.71□□□□□ -0.37
CSMD2-204ENST00000373380 CT47A1Q5JQC4 288 aaPredicted RBP12.71□□□□□ -0.38
CSMD2-204ENST00000373380 ZHX3Q9H4I2 956 aa12.71□□□□□ -0.38
CSMD2-204ENST00000373380 NCKAP5LQ9HCH0 1330 aa12.7□□□□□ -0.38
CSMD2-204ENST00000373380 ZSCAN22P10073 491 aaPredicted RBP12.7□□□□□ -0.38
CSMD2-204ENST00000373380 RAB3GAP1Q15042 981 aa12.7□□□□□ -0.38
CSMD2-204ENST00000373380 ISM2Q6H9L7 571 aa12.7□□□□□ -0.38
CSMD2-204ENST00000373380 CEP85Q6P2H3 762 aa12.7□□□□□ -0.38
CSMD2-204ENST00000373380 DDX19AQ9NUU7 478 aaKnown RBP12.7□□□□□ -0.38
CSMD2-204ENST00000373380 POLR3DP05423 398 aaPredicted RBP12.7□□□□□ -0.38
CSMD2-204ENST00000373380 DDX46Q7L014 1031 aaKnown RBP12.7□□□□□ -0.38
CSMD2-204ENST00000373380 OTUD7AQ8TE49 926 aaPredicted RBP12.7□□□□□ -0.38
CSMD2-204ENST00000373380 BRF1Q92994 677 aa12.7□□□□□ -0.38
CSMD2-204ENST00000373380 TSPYL1Q9H0U9 437 aa12.7□□□□□ -0.38
CSMD2-204ENST00000373380 NOL7Q9UMY1 257 aaKnown RBP12.7□□□□□ -0.38
CSMD2-204ENST00000373380 CCAR1Q8IX12 1150 aaKnown RBP12.7□□□□□ -0.38
CSMD2-204ENST00000373380 KIF18AQ8NI77 898 aa12.7□□□□□ -0.38
CSMD2-204ENST00000373380 URI1O94763 535 aaPredicted RBP12.69□□□□□ -0.38
CSMD2-204ENST00000373380 KRT18P05783 430 aaKnown RBP12.69□□□□□ -0.38
CSMD2-204ENST00000373380 DHX8Q14562 1220 aaKnown RBP12.69□□□□□ -0.38
CSMD2-204ENST00000373380 BICDL1Q6ZP65 573 aa12.69□□□□□ -0.38
CSMD2-204ENST00000373380 BBXQ8WY36 941 aaPredicted RBP12.69□□□□□ -0.38
CSMD2-204ENST00000373380 CLASP1Q7Z460 1538 aa12.69□□□□□ -0.38
CSMD2-204ENST00000373380 GOLGA8BA8MQT2 603 aa12.69□□□□□ -0.38
CSMD2-204ENST00000373380 ATP8B2P98198 1209 aa12.69□□□□□ -0.38
CSMD2-204ENST00000373380 NEK1Q96PY6 1258 aa12.69□□□□□ -0.38
CSMD2-204ENST00000373380 TTC12Q9H892 705 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms