RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 TIMM10P62072 90 aa15.89■□□□□ 0.13
NCDN-203ENST00000373253 RAB11FIP4Q86YS3 637 aa15.89■□□□□ 0.13
NCDN-203ENST00000373253 ZCRB1Q8TBF4 217 aaKnown RBP15.89■□□□□ 0.13
NCDN-203ENST00000373253 FAM227BQ96M60 508 aa15.89■□□□□ 0.13
NCDN-203ENST00000373253 CEP170BQ9Y4F5 1589 aaPredicted RBP15.89■□□□□ 0.13
NCDN-203ENST00000373253 CDC42BPGQ6DT37 1551 aa15.88■□□□□ 0.13
NCDN-203ENST00000373253 PTCH1Q13635 1447 aa15.88■□□□□ 0.13
NCDN-203ENST00000373253 NEURL4Q96JN8 1562 aa15.88■□□□□ 0.13
NCDN-203ENST00000373253 TLR7Q9NYK1 1049 aaKnown RBP15.88■□□□□ 0.13
NCDN-203ENST00000373253 LINS1Q8NG48 757 aa15.87■□□□□ 0.13
NCDN-203ENST00000373253 CRB1P82279 1406 aa15.87■□□□□ 0.13
NCDN-203ENST00000373253 XRCC6P12956 609 aaKnown RBP eCLIP15.87■□□□□ 0.13
NCDN-203ENST00000373253 DDX21Q9NR30 783 aaKnown RBP eCLIP15.87■□□□□ 0.13
NCDN-203ENST00000373253 TMOD3Q9NYL9 352 aa15.87■□□□□ 0.13
NCDN-203ENST00000373253 SYCE3A1L190 88 aa15.87■□□□□ 0.13
NCDN-203ENST00000373253 BICDL1Q6ZP65 573 aa15.87■□□□□ 0.13
NCDN-203ENST00000373253 CCDC129Q6ZRS4 1044 aa15.87■□□□□ 0.13
NCDN-203ENST00000373253 TTLL7Q6ZT98 887 aa15.87■□□□□ 0.13
NCDN-203ENST00000373253 GRPEL1Q9HAV7 217 aa15.87■□□□□ 0.13
NCDN-203ENST00000373253 GOLIM4O00461 696 aa15.86■□□□□ 0.13
NCDN-203ENST00000373253 RAB11FIP3O75154 756 aa15.86■□□□□ 0.13
NCDN-203ENST00000373253 DNTTIP2Q5QJE6 756 aaKnown RBP15.86■□□□□ 0.13
NCDN-203ENST00000373253 SLC52A2Q9HAB3 445 aa15.86■□□□□ 0.13
NCDN-203ENST00000373253 ERBB3P21860 1342 aa15.86■□□□□ 0.13
NCDN-203ENST00000373253 TFCP2Q12800 502 aa15.86■□□□□ 0.13
NCDN-203ENST00000373253 KIF2CQ99661 725 aa15.86■□□□□ 0.13
NCDN-203ENST00000373253 TBC1D2BQ9UPU7 963 aa15.86■□□□□ 0.13
NCDN-203ENST00000373253 DLC1Q96QB1 1528 aa15.85■□□□□ 0.13
NCDN-203ENST00000373253 NPHP4O75161 1426 aaPredicted RBP15.85■□□□□ 0.13
NCDN-203ENST00000373253 SLFNL1Q499Z3 407 aa15.85■□□□□ 0.13
NCDN-203ENST00000373253 EAF2Q96CJ1 260 aaPredicted RBP15.85■□□□□ 0.13
NCDN-203ENST00000373253 FAM89AQ96GI7 184 aa15.85■□□□□ 0.13
NCDN-203ENST00000373253 PDRG1Q9NUG6 133 aa15.85■□□□□ 0.13
NCDN-203ENST00000373253 BTG4Q9NY30 223 aa15.85■□□□□ 0.13
NCDN-203ENST00000373253 CHGBP05060 677 aa15.84■□□□□ 0.13
NCDN-203ENST00000373253 PHKG2P15735 406 aa15.84■□□□□ 0.13
NCDN-203ENST00000373253 CHST3Q7LGC8 479 aa15.84■□□□□ 0.13
NCDN-203ENST00000373253 IL25Q9H293 177 aa15.84■□□□□ 0.13
NCDN-203ENST00000373253 ZNF335Q9H4Z2 1342 aaPredicted RBP15.84■□□□□ 0.13
NCDN-203ENST00000373253 USP31Q70CQ4 1352 aa15.84■□□□□ 0.13
NCDN-203ENST00000373253 NASPP49321 788 aaPredicted RBP15.84■□□□□ 0.13
NCDN-203ENST00000373253 ERC1Q8IUD2 1116 aa15.84■□□□□ 0.13
NCDN-203ENST00000373253 SNX21Q969T3 373 aa15.84■□□□□ 0.13
NCDN-203ENST00000373253 CYP46A1Q9Y6A2 500 aa15.84■□□□□ 0.13
NCDN-203ENST00000373253 CYP27B1O15528 508 aa15.84■□□□□ 0.13
NCDN-203ENST00000373253 HAND2P61296 217 aa15.84■□□□□ 0.13
NCDN-203ENST00000373253 CCDC57Q2TAC2 916 aa15.84■□□□□ 0.13
NCDN-203ENST00000373253 H3BQV1 296 aa15.83■□□□□ 0.13
NCDN-203ENST00000373253 NMIQ13287 307 aaPredicted RBP15.83■□□□□ 0.13
NCDN-203ENST00000373253 IFFO2Q5TF58 517 aa15.83■□□□□ 0.13
NCDN-203ENST00000373253 HELBQ8NG08 1087 aaPredicted RBP15.83■□□□□ 0.13
NCDN-203ENST00000373253 SSH3Q8TE77 659 aa15.83■□□□□ 0.12
NCDN-203ENST00000373253 BCL11BQ9C0K0 894 aaPredicted RBP15.83■□□□□ 0.12
NCDN-203ENST00000373253 CNNM1Q9NRU3 951 aa15.83■□□□□ 0.12
NCDN-203ENST00000373253 SLAIN2Q9P270 581 aa15.83■□□□□ 0.12
NCDN-203ENST00000373253 SKOR2Q2VWA4 1001 aaPredicted RBP15.83■□□□□ 0.12
NCDN-203ENST00000373253 FAM173BQ6P4H8 233 aa15.83■□□□□ 0.12
NCDN-203ENST00000373253 FAM184AQ8NB25 1140 aa15.83■□□□□ 0.12
NCDN-203ENST00000373253 EPHA10Q5JZY3 1008 aa15.82■□□□□ 0.12
NCDN-203ENST00000373253 RASEFQ8IZ41 740 aa15.82■□□□□ 0.12
NCDN-203ENST00000373253 DBNDD2Q9BQY9 259 aa15.82■□□□□ 0.12
NCDN-203ENST00000373253 GUCY1B3Q02153 619 aa15.82■□□□□ 0.12
NCDN-203ENST00000373253 SEC62Q99442 399 aaKnown RBP15.82■□□□□ 0.12
NCDN-203ENST00000373253 PTH1RQ03431 593 aa15.82■□□□□ 0.12
NCDN-203ENST00000373253 RAB3GAP1Q15042 981 aa15.82■□□□□ 0.12
NCDN-203ENST00000373253 TFIP11Q9UBB9 837 aaKnown RBP15.81■□□□□ 0.12
NCDN-203ENST00000373253 IQSEC3Q9UPP2 1182 aaPredicted RBP15.81■□□□□ 0.12
NCDN-203ENST00000373253 MRE11P49959 708 aa15.81■□□□□ 0.12
NCDN-203ENST00000373253 AK2P54819 239 aa15.81■□□□□ 0.12
NCDN-203ENST00000373253 KCNQ4P56696 695 aa15.81■□□□□ 0.12
NCDN-203ENST00000373253 BLOC1S2Q6QNY1 142 aa15.81■□□□□ 0.12
NCDN-203ENST00000373253 DCAF5Q96JK2 942 aa15.81■□□□□ 0.12
NCDN-203ENST00000373253 TECPR2O15040 1411 aa15.81■□□□□ 0.12
NCDN-203ENST00000373253 MSNP26038 577 aaKnown RBP15.81■□□□□ 0.12
NCDN-203ENST00000373253 RNF20Q5VTR2 975 aa15.81■□□□□ 0.12
NCDN-203ENST00000373253 KIF6Q6ZMV9 814 aa15.81■□□□□ 0.12
NCDN-203ENST00000373253 CEP126Q9P2H0 1117 aa15.81■□□□□ 0.12
NCDN-203ENST00000373253 CIZ1Q9ULV3 898 aaPredicted RBP15.81■□□□□ 0.12
NCDN-203ENST00000373253 RBM8AQ9Y5S9 174 aaKnown RBP15.81■□□□□ 0.12
NCDN-203ENST00000373253 GCKRQ14397 625 aa15.8■□□□□ 0.12
NCDN-203ENST00000373253 DIP2AQ14689 1571 aa15.8■□□□□ 0.12
NCDN-203ENST00000373253 CCT2P78371 535 aaKnown RBP15.8■□□□□ 0.12
NCDN-203ENST00000373253 LARP1BQ659C4 914 aaKnown RBP15.8■□□□□ 0.12
NCDN-203ENST00000373253 DNAJC10Q8IXB1 793 aa15.79■□□□□ 0.12
NCDN-203ENST00000373253 IBTKQ9P2D0 1353 aaPredicted RBP15.79■□□□□ 0.12
NCDN-203ENST00000373253 NEURL1BA8MQ27 555 aa15.79■□□□□ 0.12
NCDN-203ENST00000373253 IDH1O75874 414 aaKnown RBP15.79■□□□□ 0.12
NCDN-203ENST00000373253 ALDH1L1O75891 902 aa15.79■□□□□ 0.12
NCDN-203ENST00000373253 IL2RBP14784 551 aa15.79■□□□□ 0.12
NCDN-203ENST00000373253 ASAP1Q9ULH1 1129 aa15.79■□□□□ 0.12
NCDN-203ENST00000373253 SYNE4Q8N205 404 aa15.78■□□□□ 0.12
NCDN-203ENST00000373253 RIMS1Q86UR5 1692 aaKnown RBP15.78■□□□□ 0.12
NCDN-203ENST00000373253 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.78■□□□□ 0.12
NCDN-203ENST00000373253 KIF20BQ96Q89 1820 aa15.78■□□□□ 0.12
NCDN-203ENST00000373253 IGKV5-2P06315 115 aa15.78■□□□□ 0.12
NCDN-203ENST00000373253 CAMK4Q16566 473 aa15.78■□□□□ 0.12
NCDN-203ENST00000373253 ADCK5Q3MIX3 580 aa15.78■□□□□ 0.12
NCDN-203ENST00000373253 TTC39AQ5SRH9 613 aa15.78■□□□□ 0.12
NCDN-203ENST00000373253 GAS2L3Q86XJ1 694 aa15.78■□□□□ 0.12
NCDN-203ENST00000373253 ATP10DQ9P241 1426 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 648.8 ms