RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 VIRMAQ69YN4 1812 aaKnown RBP21.41■■□□□ 1.02
TRAPPC3-203ENST00000373163 TTC5Q8N0Z6 440 aa21.41■■□□□ 1.02
TRAPPC3-203ENST00000373163 CNTROBQ8N137 903 aa21.41■■□□□ 1.02
TRAPPC3-203ENST00000373163 SETDB2Q96T68 719 aa21.41■■□□□ 1.02
TRAPPC3-203ENST00000373163 PANK3Q9H999 370 aa21.41■■□□□ 1.02
TRAPPC3-203ENST00000373163 ABT1Q9ULW3 272 aaKnown RBP21.41■■□□□ 1.02
TRAPPC3-203ENST00000373163 CCDC93Q567U6 631 aa21.4■■□□□ 1.02
TRAPPC3-203ENST00000373163 MAP1SQ66K74 1059 aaPredicted RBP21.4■■□□□ 1.02
TRAPPC3-203ENST00000373163 PNMA8AQ86V59 439 aaPredicted RBP21.4■■□□□ 1.02
TRAPPC3-203ENST00000373163 SCN4AP35499 1836 aa21.4■■□□□ 1.02
TRAPPC3-203ENST00000373163 SCN7AQ01118 1682 aa21.4■■□□□ 1.02
TRAPPC3-203ENST00000373163 RGS19P49795 217 aa21.39■■□□□ 1.01
TRAPPC3-203ENST00000373163 FKBP4Q02790 459 aaKnown RBP eCLIP21.38■■□□□ 1.01
TRAPPC3-203ENST00000373163 C7orf43Q8WVR3 580 aa21.38■■□□□ 1.01
TRAPPC3-203ENST00000373163 ZNF277Q9NRM2 450 aaPredicted RBP21.38■■□□□ 1.01
TRAPPC3-203ENST00000373163 SLX4Q8IY92 1834 aa21.38■■□□□ 1.01
TRAPPC3-203ENST00000373163 RNF123Q5XPI4 1314 aa21.37■■□□□ 1.01
TRAPPC3-203ENST00000373163 IL6STP40189 918 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC3-203ENST00000373163 MTHFSDQ2M296 383 aaKnown RBP21.37■■□□□ 1.01
TRAPPC3-203ENST00000373163 ADAMTSL1Q8N6G6 1762 aa21.37■■□□□ 1.01
TRAPPC3-203ENST00000373163 CAMTA2O94983 1202 aa21.36■■□□□ 1.01
TRAPPC3-203ENST00000373163 HMOX1P09601 288 aa21.36■■□□□ 1.01
TRAPPC3-203ENST00000373163 NPM2Q86SE8 214 aaKnown RBP21.36■■□□□ 1.01
TRAPPC3-203ENST00000373163 ZNF496Q96IT1 587 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC3-203ENST00000373163 BEGAINQ9BUH8 593 aa21.36■■□□□ 1.01
TRAPPC3-203ENST00000373163 TEX13AQ9BXU3 409 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC3-203ENST00000373163 UBR2Q8IWV8 1755 aa21.35■■□□□ 1.01
TRAPPC3-203ENST00000373163 HEG1Q9ULI3 1381 aa21.35■■□□□ 1.01
TRAPPC3-203ENST00000373163 DDX21Q9NR30 783 aaKnown RBP eCLIP21.34■■□□□ 1.01
TRAPPC3-203ENST00000373163 NPR1P16066 1061 aa21.33■■□□□ 1.01
TRAPPC3-203ENST00000373163 PAXIP1Q6ZW49 1069 aaPredicted RBP21.33■■□□□ 1.01
TRAPPC3-203ENST00000373163 RTKN2Q8IZC4 609 aa21.33■■□□□ 1.01
TRAPPC3-203ENST00000373163 CAPNS2Q96L46 248 aa21.33■■□□□ 1.01
TRAPPC3-203ENST00000373163 FZD9O00144 591 aa21.32■■□□□ 1
TRAPPC3-203ENST00000373163 ECE1P42892 770 aa21.32■■□□□ 1
TRAPPC3-203ENST00000373163 ZNF790Q6PG37 636 aa21.32■■□□□ 1
TRAPPC3-203ENST00000373163 NBPF5PQ86XG9 351 aaPredicted RBP21.32■■□□□ 1
TRAPPC3-203ENST00000373163 GPC2Q8N158 579 aa21.32■■□□□ 1
TRAPPC3-203ENST00000373163 ARFGEF2Q9Y6D5 1785 aa21.32■■□□□ 1
TRAPPC3-203ENST00000373163 A1BGP04217 495 aa21.31■■□□□ 1
TRAPPC3-203ENST00000373163 IARSP41252 1262 aaKnown RBP21.31■■□□□ 1
TRAPPC3-203ENST00000373163 GRM1Q13255 1194 aa21.31■■□□□ 1
TRAPPC3-203ENST00000373163 OLFM4Q6UX06 510 aa21.31■■□□□ 1
TRAPPC3-203ENST00000373163 GPR101Q96P66 508 aaPredicted RBP21.31■■□□□ 1
TRAPPC3-203ENST00000373163 THSD7BQ9C0I4 1608 aa21.3■■□□□ 1
TRAPPC3-203ENST00000373163 DZIP3Q86Y13 1208 aaKnown RBP21.3■■□□□ 1
TRAPPC3-203ENST00000373163 CACNA1SQ13698 1873 aa21.29■■□□□ 1
TRAPPC3-203ENST00000373163 TEFQ10587 303 aa21.29■■□□□ 1
TRAPPC3-203ENST00000373163 CYP4F22Q6NT55 531 aa21.29■■□□□ 1
TRAPPC3-203ENST00000373163 CFAP44Q96MT7 982 aa21.29■■□□□ 1
TRAPPC3-203ENST00000373163 SYNE4Q8N205 404 aa21.28■■□□□ 1
TRAPPC3-203ENST00000373163 FMNL2Q96PY5 1086 aa21.28■■□□□ 1
TRAPPC3-203ENST00000373163 TSKSQ9UJT2 592 aa21.28■■□□□ 1
TRAPPC3-203ENST00000373163 KLRG2A4D1S0 409 aaPredicted RBP21.27■■□□□ 1
TRAPPC3-203ENST00000373163 FMR1Q06787 632 aaKnown RBP eCLIP21.27■■□□□ 1
TRAPPC3-203ENST00000373163 KNSTRNQ9Y448 316 aa21.27■■□□□ 1
TRAPPC3-203ENST00000373163 LMOD1P29536 600 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC3-203ENST00000373163 CLEC4GQ6UXB4 293 aa21.26■□□□□ 0.99
TRAPPC3-203ENST00000373163 JDP2Q8WYK2 163 aa21.26■□□□□ 0.99
TRAPPC3-203ENST00000373163 IL17REQ8NFR9 667 aa21.25■□□□□ 0.99
TRAPPC3-203ENST00000373163 ZNF652Q9Y2D9 606 aa21.25■□□□□ 0.99
TRAPPC3-203ENST00000373163 GJA3Q9Y6H8 435 aa21.25■□□□□ 0.99
TRAPPC3-203ENST00000373163 EIF6P56537 245 aaKnown RBP21.24■□□□□ 0.99
TRAPPC3-203ENST00000373163 CST9Q5W186 159 aa21.24■□□□□ 0.99
TRAPPC3-203ENST00000373163 TPTE2Q6XPS3 522 aa21.24■□□□□ 0.99
TRAPPC3-203ENST00000373163 MCOLN1Q9GZU1 580 aa21.24■□□□□ 0.99
TRAPPC3-203ENST00000373163 TLL2Q9Y6L7 1015 aa21.24■□□□□ 0.99
TRAPPC3-203ENST00000373163 ALDH1B1P30837 517 aa21.23■□□□□ 0.99
TRAPPC3-203ENST00000373163 MAP2K2P36507 400 aa21.23■□□□□ 0.99
TRAPPC3-203ENST00000373163 PIP4K2AP48426 406 aaPredicted RBP21.23■□□□□ 0.99
TRAPPC3-203ENST00000373163 PSMD1Q99460 953 aa21.23■□□□□ 0.99
TRAPPC3-203ENST00000373163 BCORQ6W2J9 1755 aa21.23■□□□□ 0.99
TRAPPC3-203ENST00000373163 GNAT3A8MTJ3 354 aa21.22■□□□□ 0.99
TRAPPC3-203ENST00000373163 TRAF5O00463 557 aa21.22■□□□□ 0.99
TRAPPC3-203ENST00000373163 DIAPH1O60610 1272 aaKnown RBP21.22■□□□□ 0.99
TRAPPC3-203ENST00000373163 AOC2O75106 756 aa21.22■□□□□ 0.99
TRAPPC3-203ENST00000373163 CA12O43570 354 aa21.21■□□□□ 0.99
TRAPPC3-203ENST00000373163 EPS15P42566 896 aa21.21■□□□□ 0.99
TRAPPC3-203ENST00000373163 SCNN1DP51172 638 aa21.21■□□□□ 0.99
TRAPPC3-203ENST00000373163 NIP7Q9Y221 180 aaKnown RBP eCLIP21.21■□□□□ 0.99
TRAPPC3-203ENST00000373163 SNED1Q8TER0 1413 aa21.21■□□□□ 0.99
TRAPPC3-203ENST00000373163 USP50Q70EL3 339 aaPredicted RBP21.2■□□□□ 0.98
TRAPPC3-203ENST00000373163 GAS2L2Q8NHY3 880 aa21.2■□□□□ 0.98
TRAPPC3-203ENST00000373163 TIMELESSQ9UNS1 1208 aa21.2■□□□□ 0.98
TRAPPC3-203ENST00000373163 LTBP1Q14766 1721 aa21.2■□□□□ 0.98
TRAPPC3-203ENST00000373163 FAM177BA6PVY3 158 aa21.19■□□□□ 0.98
TRAPPC3-203ENST00000373163 KCNQ3O43525 872 aa21.19■□□□□ 0.98
TRAPPC3-203ENST00000373163 EIF4G2P78344 907 aaKnown RBP eCLIP21.19■□□□□ 0.98
TRAPPC3-203ENST00000373163 AMER1Q5JTC6 1135 aaPredicted RBP21.19■□□□□ 0.98
TRAPPC3-203ENST00000373163 USP16Q9Y5T5 823 aa21.19■□□□□ 0.98
TRAPPC3-203ENST00000373163 BTBD11A6QL63 1104 aa21.18■□□□□ 0.98
TRAPPC3-203ENST00000373163 COL4A5P29400 1685 aa21.18■□□□□ 0.98
TRAPPC3-203ENST00000373163 HSPA5P11021 654 aaKnown RBP21.17■□□□□ 0.98
TRAPPC3-203ENST00000373163 DGKZQ13574 1117 aa21.17■□□□□ 0.98
TRAPPC3-203ENST00000373163 CC2D2BQ6DHV5 1058 aa21.17■□□□□ 0.98
TRAPPC3-203ENST00000373163 CEMIPQ8WUJ3 1361 aa21.16■□□□□ 0.98
TRAPPC3-203ENST00000373163 RGL2O15211 777 aa21.16■□□□□ 0.98
TRAPPC3-203ENST00000373163 GTF2E1P29083 439 aaPredicted RBP21.16■□□□□ 0.98
TRAPPC3-203ENST00000373163 BRPF1P55201 1214 aaPredicted RBP21.16■□□□□ 0.98
TRAPPC3-203ENST00000373163 SAPCD2Q86UD0 394 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms