RNA–Protein interactions for RNA: ENST00000373034.8

PCDH19-202, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 9,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-202ENST00000373034 VCX3BQ9H321 246 aa17.67■□□□□ 0.42
PCDH19-202ENST00000373034 ATRIPQ8WXE1 791 aa17.66■□□□□ 0.42
PCDH19-202ENST00000373034 LUC7L2Q9Y383 392 aaKnown RBP17.66■□□□□ 0.42
PCDH19-202ENST00000373034 BAG4O95429 457 aaKnown RBP17.66■□□□□ 0.42
PCDH19-202ENST00000373034 SARNPP82979 210 aaKnown RBP17.66■□□□□ 0.42
PCDH19-202ENST00000373034 CCDC14Q49A88 953 aa17.66■□□□□ 0.42
PCDH19-202ENST00000373034 KIF5AQ12840 1032 aa17.66■□□□□ 0.42
PCDH19-202ENST00000373034 TCP11L1Q9NUJ3 509 aa17.66■□□□□ 0.42
PCDH19-202ENST00000373034 AKAP2Q9Y2D5 859 aa17.66■□□□□ 0.42
PCDH19-202ENST00000373034 GNG11P61952 73 aa17.66■□□□□ 0.42
PCDH19-202ENST00000373034 KIAA1524Q8TCG1 905 aa17.66■□□□□ 0.42
PCDH19-202ENST00000373034 SETDB1Q15047 1291 aa17.66■□□□□ 0.42
PCDH19-202ENST00000373034 DZIP1Q86YF9 867 aaKnown RBP17.65■□□□□ 0.42
PCDH19-202ENST00000373034 IFT74Q96LB3 600 aa17.65■□□□□ 0.42
PCDH19-202ENST00000373034 NDC80O14777 642 aa17.65■□□□□ 0.42
PCDH19-202ENST00000373034 ATP2C2O75185 946 aa17.65■□□□□ 0.42
PCDH19-202ENST00000373034 TMEM87AQ8NBN3 555 aa17.65■□□□□ 0.42
PCDH19-202ENST00000373034 GBP7Q8N8V2 638 aaPredicted RBP17.65■□□□□ 0.42
PCDH19-202ENST00000373034 CTCFLQ8NI51 663 aaPredicted RBP17.65■□□□□ 0.42
PCDH19-202ENST00000373034 SSRP1Q08945 709 aaKnown RBP17.65■□□□□ 0.42
PCDH19-202ENST00000373034 MYOM3Q5VTT5 1437 aa17.65■□□□□ 0.42
PCDH19-202ENST00000373034 USP37Q86T82 979 aa17.65■□□□□ 0.42
PCDH19-202ENST00000373034 RMND1Q9NWS8 449 aa17.65■□□□□ 0.42
PCDH19-202ENST00000373034 SAMD15Q9P1V8 674 aa17.65■□□□□ 0.42
PCDH19-202ENST00000373034 CCDC50Q8IVM0 306 aa17.65■□□□□ 0.42
PCDH19-202ENST00000373034 CACNA2D3Q8IZS8 1091 aa17.65■□□□□ 0.42
PCDH19-202ENST00000373034 ATP2A2P16615 1042 aaKnown RBP17.64■□□□□ 0.42
PCDH19-202ENST00000373034 CCDC174Q6PII3 467 aa17.64■□□□□ 0.42
PCDH19-202ENST00000373034 MCM6Q14566 821 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 B4GALNT4Q76KP1 1039 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 IQCA1Q86XH1 822 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 TUBBP07437 444 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 CYLC1P35663 651 aaPredicted RBP17.64■□□□□ 0.41
PCDH19-202ENST00000373034 UBE2HP62256 183 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 STRN4Q9NRL3 753 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 TMX1Q9H3N1 280 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 SLC12A7Q9Y666 1083 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 NAA25Q14CX7 972 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 CCDC114Q96M63 670 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 CEP126Q9P2H0 1117 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 USP25Q9UHP3 1055 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 WIZO95785 1651 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 CCDC40Q4G0X9 1142 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 TRIM7Q9C029 511 aa17.64■□□□□ 0.41
PCDH19-202ENST00000373034 CTAGE15A4D2H0 777 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 CTAGE8P0CG41 777 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 CTAGE6Q86UF2 777 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 CTAGE4Q8IX94 777 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 FAM177BA6PVY3 158 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 EXOSC9Q06265 439 aaKnown RBP17.63■□□□□ 0.41
PCDH19-202ENST00000373034 CCDC63Q8NA47 563 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 SYNCQ9H7C4 482 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 PRC1O43663 620 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 GBP1P32455 592 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 CPLX4Q7Z7G2 160 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 GOLGA1Q92805 767 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 SYCP3Q8IZU3 236 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 TMOD2Q9NZR1 351 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 PPFIBP2Q8ND30 876 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 CIB2O75838 187 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 SF3B2Q13435 895 aaKnown RBP17.63■□□□□ 0.41
PCDH19-202ENST00000373034 ABTB2Q8N961 1025 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 ERCC6LQ2NKX8 1250 aa17.63■□□□□ 0.41
PCDH19-202ENST00000373034 GLRX3O76003 335 aaKnown RBP17.62■□□□□ 0.41
PCDH19-202ENST00000373034 PRKAR2BP31323 418 aa17.62■□□□□ 0.41
PCDH19-202ENST00000373034 CASQ2O14958 399 aaPredicted RBP17.62■□□□□ 0.41
PCDH19-202ENST00000373034 SH2D4BQ5SQS7 431 aa17.62■□□□□ 0.41
PCDH19-202ENST00000373034 CPLX3Q8WVH0 158 aa17.62■□□□□ 0.41
PCDH19-202ENST00000373034 IGHMBP2P38935 993 aaKnown RBP17.62■□□□□ 0.41
PCDH19-202ENST00000373034 MKNK2Q9HBH9 465 aa17.62■□□□□ 0.41
PCDH19-202ENST00000373034 SUPT6HQ7KZ85 1726 aaKnown RBP17.62■□□□□ 0.41
PCDH19-202ENST00000373034 ATP5DP30049 168 aa17.62■□□□□ 0.41
PCDH19-202ENST00000373034 LIG1P18858 919 aa17.62■□□□□ 0.41
PCDH19-202ENST00000373034 SNX16P57768 344 aa17.62■□□□□ 0.41
PCDH19-202ENST00000373034 TCERG1LQ5VWI1 586 aa17.62■□□□□ 0.41
PCDH19-202ENST00000373034 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.62■□□□□ 0.41
PCDH19-202ENST00000373034 RPGRIP1LQ68CZ1 1315 aa17.62■□□□□ 0.41
PCDH19-202ENST00000373034 CCDC194A0A1B0GVG4 234 aa17.62■□□□□ 0.41
PCDH19-202ENST00000373034 CCDC144CPQ8IYA2 1237 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 EPSTI1Q96J88 318 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 NAPBQ9H115 298 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 CEP128Q6ZU80 1094 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 LMNTD2Q8IXW0 634 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 CFAP157Q5JU67 520 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 CATIPQ7Z7H3 387 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 TXNDC16Q9P2K2 825 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 ZNF853P0CG23 659 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 FSIP1Q8NA03 581 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 PPP1R9BQ96SB3 815 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 RASSF4Q9H2L5 321 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 RNF41Q9H4P4 317 aaPredicted RBP17.61■□□□□ 0.41
PCDH19-202ENST00000373034 LMBR1Q8WVP7 490 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 KIF1BPQ96EK5 621 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 TTC36A6NLP5 189 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 A6NNZ2 444 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 CABP4P57796 275 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 TUBB8Q3ZCM7 444 aa17.61■□□□□ 0.41
PCDH19-202ENST00000373034 NBPF11Q86T75 865 aa17.6■□□□□ 0.41
PCDH19-202ENST00000373034 FAM114A2Q9NRY5 505 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms