RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 FSD2A1L4K1 749 aa22.8■■□□□ 1.24
USP49-202ENST00000373010 BAG4O95429 457 aaKnown RBP22.8■■□□□ 1.24
USP49-202ENST00000373010 ANAPC15P60006 121 aa22.8■■□□□ 1.24
USP49-202ENST00000373010 CPDO75976 1380 aa22.8■■□□□ 1.24
USP49-202ENST00000373010 MRC1P22897 1456 aa22.79■■□□□ 1.24
USP49-202ENST00000373010 NUCB2P80303 420 aa22.79■■□□□ 1.24
USP49-202ENST00000373010 CLEC17AQ6ZS10 378 aa22.79■■□□□ 1.24
USP49-202ENST00000373010 CWC22Q9HCG8 908 aaKnown RBP22.79■■□□□ 1.24
USP49-202ENST00000373010 TTC41PQ6P2S7 1318 aa22.79■■□□□ 1.24
USP49-202ENST00000373010 CYP2E1P05181 493 aaPredicted RBP22.79■■□□□ 1.24
USP49-202ENST00000373010 SNRPA1P09661 255 aaKnown RBP22.79■■□□□ 1.24
USP49-202ENST00000373010 TMX3Q96JJ7 454 aa22.79■■□□□ 1.24
USP49-202ENST00000373010 MYD88Q99836 296 aa22.79■■□□□ 1.24
USP49-202ENST00000373010 NEURL1BA8MQ27 555 aa22.78■■□□□ 1.24
USP49-202ENST00000373010 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.78■■□□□ 1.24
USP49-202ENST00000373010 SGSM2O43147 1006 aa22.78■■□□□ 1.24
USP49-202ENST00000373010 GLRX3O76003 335 aaKnown RBP22.78■■□□□ 1.24
USP49-202ENST00000373010 CABP4P57796 275 aa22.78■■□□□ 1.24
USP49-202ENST00000373010 NEXNQ0ZGT2 675 aa22.78■■□□□ 1.24
USP49-202ENST00000373010 NOL8Q76FK4 1167 aaKnown RBP22.78■■□□□ 1.24
USP49-202ENST00000373010 DNAJC5Q9H3Z4 198 aa22.78■■□□□ 1.24
USP49-202ENST00000373010 LRP10Q7Z4F1 713 aa22.77■■□□□ 1.24
USP49-202ENST00000373010 ERC1Q8IUD2 1116 aa22.77■■□□□ 1.24
USP49-202ENST00000373010 UPF3BQ9BZI7 483 aaKnown RBP22.77■■□□□ 1.24
USP49-202ENST00000373010 IFIT2P09913 472 aaKnown RBP22.77■■□□□ 1.24
USP49-202ENST00000373010 FMNL2Q96PY5 1086 aa22.77■■□□□ 1.24
USP49-202ENST00000373010 METTL22Q9BUU2 404 aaPredicted RBP22.77■■□□□ 1.24
USP49-202ENST00000373010 SASH1O94885 1247 aa22.76■■□□□ 1.23
USP49-202ENST00000373010 HSPA4P34932 840 aa22.76■■□□□ 1.23
USP49-202ENST00000373010 GCKRQ14397 625 aa22.76■■□□□ 1.23
USP49-202ENST00000373010 AACSQ86V21 672 aa22.76■■□□□ 1.23
USP49-202ENST00000373010 ECHDC1Q9NTX5 307 aa22.76■■□□□ 1.23
USP49-202ENST00000373010 XRCC6P12956 609 aaKnown RBP eCLIP22.76■■□□□ 1.23
USP49-202ENST00000373010 CWC27Q6UX04 472 aaKnown RBP22.76■■□□□ 1.23
USP49-202ENST00000373010 SKOR2Q2VWA4 1001 aaPredicted RBP22.75■■□□□ 1.23
USP49-202ENST00000373010 ANKRD13DQ6ZTN6 518 aa22.75■■□□□ 1.23
USP49-202ENST00000373010 JARID2Q92833 1246 aaPredicted RBP22.75■■□□□ 1.23
USP49-202ENST00000373010 IL17RAQ96F46 866 aa22.75■■□□□ 1.23
USP49-202ENST00000373010 SIL1Q9H173 461 aa22.75■■□□□ 1.23
USP49-202ENST00000373010 PTMSP20962 102 aa22.74■■□□□ 1.23
USP49-202ENST00000373010 G3BP1Q13283 466 aaKnown RBP eCLIP22.74■■□□□ 1.23
USP49-202ENST00000373010 EPHA10Q5JZY3 1008 aa22.74■■□□□ 1.23
USP49-202ENST00000373010 PRDM11Q9NQV5 511 aa22.74■■□□□ 1.23
USP49-202ENST00000373010 GOLGA6L22H0YM25 854 aa22.74■■□□□ 1.23
USP49-202ENST00000373010 MCM2P49736 904 aa22.74■■□□□ 1.23
USP49-202ENST00000373010 KLHDC4Q8TBB5 520 aa22.74■■□□□ 1.23
USP49-202ENST00000373010 LSG1Q9H089 658 aaKnown RBP22.74■■□□□ 1.23
USP49-202ENST00000373010 ZDHHC9Q9Y397 364 aa22.74■■□□□ 1.23
USP49-202ENST00000373010 RAD50Q92878 1312 aa22.74■■□□□ 1.23
USP49-202ENST00000373010 PLEKHG2Q9H7P9 1386 aa22.73■■□□□ 1.23
USP49-202ENST00000373010 MCTP1Q6DN14 999 aa22.73■■□□□ 1.23
USP49-202ENST00000373010 EPB41L2O43491 1005 aaKnown RBP22.72■■□□□ 1.23
USP49-202ENST00000373010 EAF2Q96CJ1 260 aaPredicted RBP22.72■■□□□ 1.23
USP49-202ENST00000373010 GPATCH3Q96I76 525 aa22.72■■□□□ 1.23
USP49-202ENST00000373010 CCDC8Q9H0W5 538 aaPredicted RBP22.72■■□□□ 1.23
USP49-202ENST00000373010 TOM1L2Q6ZVM7 507 aa22.72■■□□□ 1.23
USP49-202ENST00000373010 DIAPH3Q9NSV4 1193 aa22.71■■□□□ 1.23
USP49-202ENST00000373010 WDR17Q8IZU2 1322 aa22.71■■□□□ 1.23
USP49-202ENST00000373010 CUL4AQ13619 759 aa22.71■■□□□ 1.23
USP49-202ENST00000373010 TLR7Q9NYK1 1049 aaKnown RBP22.71■■□□□ 1.23
USP49-202ENST00000373010 AFDNP55196 1824 aaKnown RBP22.71■■□□□ 1.23
USP49-202ENST00000373010 GLI3P10071 1580 aa22.71■■□□□ 1.23
USP49-202ENST00000373010 PANK2Q9BZ23 570 aa22.7■■□□□ 1.22
USP49-202ENST00000373010 SNX14Q9Y5W7 946 aa22.7■■□□□ 1.22
USP49-202ENST00000373010 KIAA1211Q6ZU35 1233 aa22.7■■□□□ 1.22
USP49-202ENST00000373010 ATP5J2-PTCD1G3V325 749 aa22.69■■□□□ 1.22
USP49-202ENST00000373010 PTCD1O75127 700 aaKnown RBP22.69■■□□□ 1.22
USP49-202ENST00000373010 RASEFQ8IZ41 740 aa22.69■■□□□ 1.22
USP49-202ENST00000373010 ZCRB1Q8TBF4 217 aaKnown RBP22.69■■□□□ 1.22
USP49-202ENST00000373010 SLAIN2Q9P270 581 aa22.69■■□□□ 1.22
USP49-202ENST00000373010 PARP4Q9UKK3 1724 aaKnown RBP22.69■■□□□ 1.22
USP49-202ENST00000373010 ARFGEF2Q9Y6D5 1785 aa22.69■■□□□ 1.22
USP49-202ENST00000373010 FOXD4L5Q5VV16 416 aaPredicted RBP22.69■■□□□ 1.22
USP49-202ENST00000373010 FOXD4L4Q8WXT5 416 aaPredicted RBP22.69■■□□□ 1.22
USP49-202ENST00000373010 CHAMP1Q96JM3 812 aa22.68■■□□□ 1.22
USP49-202ENST00000373010 DDX49Q9Y6V7 483 aaKnown RBP22.68■■□□□ 1.22
USP49-202ENST00000373010 STRCQ7RTU9 1775 aa22.68■■□□□ 1.22
USP49-202ENST00000373010 SOS2Q07890 1332 aaPredicted RBP22.68■■□□□ 1.22
USP49-202ENST00000373010 ZNF335Q9H4Z2 1342 aaPredicted RBP22.68■■□□□ 1.22
USP49-202ENST00000373010 LAMB4A4D0S4 1761 aa22.68■■□□□ 1.22
USP49-202ENST00000373010 UBE3BQ7Z3V4 1068 aa22.67■■□□□ 1.22
USP49-202ENST00000373010 GAS2L3Q86XJ1 694 aa22.67■■□□□ 1.22
USP49-202ENST00000373010 PCDH11XQ9BZA7 1347 aa22.67■■□□□ 1.22
USP49-202ENST00000373010 PCDH11YQ9BZA8 1340 aa22.67■■□□□ 1.22
USP49-202ENST00000373010 PTH1RQ03431 593 aa22.67■■□□□ 1.22
USP49-202ENST00000373010 EVI5LQ96CN4 794 aa22.67■■□□□ 1.22
USP49-202ENST00000373010 RUFY2Q8WXA3 655 aa22.66■■□□□ 1.22
USP49-202ENST00000373010 LMBRD1Q9NUN5 540 aa22.66■■□□□ 1.22
USP49-202ENST00000373010 COL5A2P05997 1499 aaPredicted RBP22.66■■□□□ 1.22
USP49-202ENST00000373010 NBPF26B4DH59 902 aa22.66■■□□□ 1.22
USP49-202ENST00000373010 MRE11P49959 708 aa22.66■■□□□ 1.22
USP49-202ENST00000373010 NBPF14Q5TI25 921 aa22.66■■□□□ 1.22
USP49-202ENST00000373010 NBPF10Q6P3W6 841 aaKnown RBP22.66■■□□□ 1.22
USP49-202ENST00000373010 NBPF15Q8N660 670 aa22.66■■□□□ 1.22
USP49-202ENST00000373010 KLHL40Q2TBA0 621 aa22.65■■□□□ 1.22
USP49-202ENST00000373010 GRPEL1Q9HAV7 217 aa22.65■■□□□ 1.22
USP49-202ENST00000373010 INTS4Q96HW7 963 aaKnown RBP22.65■■□□□ 1.22
USP49-202ENST00000373010 A0A087WZG4 1122 aa22.64■■□□□ 1.21
USP49-202ENST00000373010 PLBD2Q8NHP8 589 aa22.64■■□□□ 1.21
USP49-202ENST00000373010 BOLA2Q9H3K6 86 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms