RNA–Protein interactions for RNA: ENST00000372771.4

RLF-201, Transcript of rearranged L-myc fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLF, Length 6,246 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLF-201ENST00000372771 KRT24Q2M2I5 525 aa17.31■□□□□ 0.36
RLF-201ENST00000372771 TMX3Q96JJ7 454 aa17.31■□□□□ 0.36
RLF-201ENST00000372771 TSPYL1Q9H0U9 437 aa17.31■□□□□ 0.36
RLF-201ENST00000372771 SEC63Q9UGP8 760 aaKnown RBP17.31■□□□□ 0.36
RLF-201ENST00000372771 C8orf34Q49A92 452 aa17.31■□□□□ 0.36
RLF-201ENST00000372771 IFNL2Q8IZJ0 200 aa17.31■□□□□ 0.36
RLF-201ENST00000372771 PANK2Q9BZ23 570 aa17.31■□□□□ 0.36
RLF-201ENST00000372771 PDIA4P13667 645 aaKnown RBP17.31■□□□□ 0.36
RLF-201ENST00000372771 LUC7LQ9NQ29 371 aaKnown RBP17.31■□□□□ 0.36
RLF-201ENST00000372771 TSPYL6Q8N831 410 aa17.3■□□□□ 0.36
RLF-201ENST00000372771 PTPN14Q15678 1187 aa17.3■□□□□ 0.36
RLF-201ENST00000372771 LDHAL6AQ6ZMR3 332 aa17.3■□□□□ 0.36
RLF-201ENST00000372771 CPLX3Q8WVH0 158 aa17.3■□□□□ 0.36
RLF-201ENST00000372771 DUOX2Q9NRD8 1548 aa17.3■□□□□ 0.36
RLF-201ENST00000372771 NEK1Q96PY6 1258 aa17.29■□□□□ 0.36
RLF-201ENST00000372771 CCDC66A2RUB6 948 aa17.29■□□□□ 0.36
RLF-201ENST00000372771 USP16Q9Y5T5 823 aa17.29■□□□□ 0.36
RLF-201ENST00000372771 EIF4A2Q14240 407 aaKnown RBP17.29■□□□□ 0.36
RLF-201ENST00000372771 MICU3Q86XE3 530 aa17.29■□□□□ 0.36
RLF-201ENST00000372771 CNNM3Q8NE01 707 aa17.29■□□□□ 0.36
RLF-201ENST00000372771 CTCFLQ8NI51 663 aaPredicted RBP17.29■□□□□ 0.36
RLF-201ENST00000372771 CTTNBP2Q8WZ74 1663 aa17.29■□□□□ 0.36
RLF-201ENST00000372771 ZSCAN23Q3MJ62 389 aa17.29■□□□□ 0.36
RLF-201ENST00000372771 PDCL2Q8N4E4 241 aa17.29■□□□□ 0.36
RLF-201ENST00000372771 ERICH4A6NGS2 130 aa17.28■□□□□ 0.36
RLF-201ENST00000372771 ADCY5O95622 1261 aa17.28■□□□□ 0.36
RLF-201ENST00000372771 PDE1AP54750 535 aa17.28■□□□□ 0.36
RLF-201ENST00000372771 ERLIN1O75477 346 aa17.28■□□□□ 0.36
RLF-201ENST00000372771 DHX37Q8IY37 1157 aaKnown RBP17.28■□□□□ 0.36
RLF-201ENST00000372771 CCDC102AQ96A19 550 aa17.28■□□□□ 0.36
RLF-201ENST00000372771 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
RLF-201ENST00000372771 GOLGA6L10A6NI86 522 aa17.28■□□□□ 0.36
RLF-201ENST00000372771 TOP1P11387 765 aaKnown RBP17.28■□□□□ 0.36
RLF-201ENST00000372771 CRACR2BQ8N4Y2 399 aaPredicted RBP17.28■□□□□ 0.36
RLF-201ENST00000372771 MATR3P43243 847 aaKnown RBP eCLIP17.27■□□□□ 0.363e-12■■□□□ 13.4
RLF-201ENST00000372771 C16orf45Q96MC5 204 aaPredicted RBP17.27■□□□□ 0.36
RLF-201ENST00000372771 GIMAP6Q6P9H5 292 aa17.27■□□□□ 0.36
RLF-201ENST00000372771 IQCA1Q86XH1 822 aa17.27■□□□□ 0.36
RLF-201ENST00000372771 CCDC196A0A1B0GTZ2 297 aa17.27■□□□□ 0.36
RLF-201ENST00000372771 NLRP5P59047 1200 aa17.27■□□□□ 0.36
RLF-201ENST00000372771 SF3B2Q13435 895 aaKnown RBP17.27■□□□□ 0.36
RLF-201ENST00000372771 HSP90AB3PQ58FF7 597 aa17.27■□□□□ 0.36
RLF-201ENST00000372771 TMEM67Q5HYA8 995 aa17.27■□□□□ 0.36
RLF-201ENST00000372771 PA2G4Q9UQ80 394 aaKnown RBP17.27■□□□□ 0.36
RLF-201ENST00000372771 ERLIN2O94905 339 aa17.27■□□□□ 0.35
RLF-201ENST00000372771 UBXN4Q92575 508 aa17.27■□□□□ 0.35
RLF-201ENST00000372771 CARD14Q9BXL6 1004 aa17.27■□□□□ 0.35
RLF-201ENST00000372771 POLKQ9UBT6 870 aa17.27■□□□□ 0.35
RLF-201ENST00000372771 PLCH2O75038 1416 aa17.27■□□□□ 0.35
RLF-201ENST00000372771 ENOX2Q16206 610 aaKnown RBP17.27■□□□□ 0.35
RLF-201ENST00000372771 ANKRD13DQ6ZTN6 518 aa17.27■□□□□ 0.35
RLF-201ENST00000372771 ZNF444Q8N0Y2 327 aaPredicted RBP17.27■□□□□ 0.35
RLF-201ENST00000372771 CNPY2Q9Y2B0 182 aa17.27■□□□□ 0.35
RLF-201ENST00000372771 XAGE3Q8WTP9 111 aa17.26■□□□□ 0.35
RLF-201ENST00000372771 RDXP35241 583 aaKnown RBP17.26■□□□□ 0.35
RLF-201ENST00000372771 MTHFSDQ2M296 383 aaKnown RBP17.26■□□□□ 0.35
RLF-201ENST00000372771 ARHGAP45Q92619 1136 aa17.26■□□□□ 0.35
RLF-201ENST00000372771 LRRC59Q96AG4 307 aaKnown RBP17.26■□□□□ 0.35
RLF-201ENST00000372771 SNRPA1P09661 255 aaKnown RBP17.26■□□□□ 0.35
RLF-201ENST00000372771 CCDC96Q2M329 555 aa17.26■□□□□ 0.35
RLF-201ENST00000372771 TESK2Q96S53 571 aa17.26■□□□□ 0.35
RLF-201ENST00000372771 UBA5Q9GZZ9 404 aa17.26■□□□□ 0.35
RLF-201ENST00000372771 URI1O94763 535 aaPredicted RBP17.25■□□□□ 0.35
RLF-201ENST00000372771 WWC2Q6AWC2 1192 aa17.25■□□□□ 0.35
RLF-201ENST00000372771 PRDM10Q9NQV6 1147 aa17.25■□□□□ 0.35
RLF-201ENST00000372771 TRAPPC8Q9Y2L5 1435 aa17.25■□□□□ 0.35
RLF-201ENST00000372771 EXOC5O00471 708 aa17.25■□□□□ 0.35
RLF-201ENST00000372771 ANKRD44Q8N8A2 993 aa17.25■□□□□ 0.35
RLF-201ENST00000372771 ORC3Q9UBD5 711 aaPredicted RBP17.25■□□□□ 0.35
RLF-201ENST00000372771 TNRQ92752 1358 aa17.25■□□□□ 0.35
RLF-201ENST00000372771 DNA2P51530 1060 aa17.25■□□□□ 0.35
RLF-201ENST00000372771 ESYT1Q9BSJ8 1104 aa17.25■□□□□ 0.35
RLF-201ENST00000372771 NCKAP5LQ9HCH0 1330 aa17.25■□□□□ 0.35
RLF-201ENST00000372771 NEFHP12036 1026 aa17.25■□□□□ 0.35
RLF-201ENST00000372771 COPS6Q7L5N1 327 aa17.25■□□□□ 0.35
RLF-201ENST00000372771 BRF1Q92994 677 aa17.25■□□□□ 0.35
RLF-201ENST00000372771 TMC6Q7Z403 805 aa17.25■□□□□ 0.35
RLF-201ENST00000372771 CASQ1P31415 396 aa17.24■□□□□ 0.35
RLF-201ENST00000372771 CBX1P83916 185 aa17.24■□□□□ 0.35
RLF-201ENST00000372771 SLC26A6Q9BXS9 759 aa17.24■□□□□ 0.35
RLF-201ENST00000372771 HCLS1P14317 486 aaPredicted RBP17.24■□□□□ 0.35
RLF-201ENST00000372771 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
RLF-201ENST00000372771 DDX19AQ9NUU7 478 aaKnown RBP17.24■□□□□ 0.35
RLF-201ENST00000372771 ZNF830Q96NB3 372 aaPredicted RBP17.24■□□□□ 0.35
RLF-201ENST00000372771 EIF3JO75822 258 aaKnown RBP17.24■□□□□ 0.35
RLF-201ENST00000372771 METAP2P50579 478 aaKnown RBP eCLIP17.24■□□□□ 0.35
RLF-201ENST00000372771 CATIPQ7Z7H3 387 aa17.24■□□□□ 0.35
RLF-201ENST00000372771 ZNF397Q8NF99 534 aaPredicted RBP17.24■□□□□ 0.35
RLF-201ENST00000372771 VAT1LQ9HCJ6 419 aa17.24■□□□□ 0.35
RLF-201ENST00000372771 SEC24BO95487 1268 aa17.24■□□□□ 0.35
RLF-201ENST00000372771 TNNT1P13805 278 aa17.24■□□□□ 0.35
RLF-201ENST00000372771 IARSP41252 1262 aaKnown RBP17.24■□□□□ 0.35
RLF-201ENST00000372771 TAX1BP1Q86VP1 789 aa17.24■□□□□ 0.35
RLF-201ENST00000372771 ZNF287Q9HBT7 754 aa17.24■□□□□ 0.35
RLF-201ENST00000372771 TXLNBQ8N3L3 684 aa17.23■□□□□ 0.35
RLF-201ENST00000372771 RBM8AQ9Y5S9 174 aaKnown RBP17.23■□□□□ 0.35
RLF-201ENST00000372771 ZSCAN22P10073 491 aaPredicted RBP17.23■□□□□ 0.35
RLF-201ENST00000372771 RNF41Q9H4P4 317 aaPredicted RBP17.23■□□□□ 0.35
RLF-201ENST00000372771 IQSEC3Q9UPP2 1182 aaPredicted RBP17.23■□□□□ 0.35
RLF-201ENST00000372771 UBE2HP62256 183 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms