RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 ZSCAN22P10073 491 aaPredicted RBP15.36■□□□□ 0.05
CTPS1-202ENST00000372621 AMOTQ4VCS5 1084 aa15.36■□□□□ 0.05
CTPS1-202ENST00000372621 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.36■□□□□ 0.05
CTPS1-202ENST00000372621 SLIT3O75094 1523 aa15.36■□□□□ 0.05
CTPS1-202ENST00000372621 MCM5P33992 734 aa15.36■□□□□ 0.05
CTPS1-202ENST00000372621 HYPKQ9NX55 129 aa15.36■□□□□ 0.05
CTPS1-202ENST00000372621 MAP3K2Q9Y2U5 619 aa15.36■□□□□ 0.05
CTPS1-202ENST00000372621 TERF1P54274 439 aa15.36■□□□□ 0.05
CTPS1-202ENST00000372621 PROSER3Q2NL68 480 aa15.36■□□□□ 0.05
CTPS1-202ENST00000372621 KSR2Q6VAB6 950 aa15.36■□□□□ 0.05
CTPS1-202ENST00000372621 CLASRPQ8N2M8 674 aaKnown RBP15.36■□□□□ 0.05
CTPS1-202ENST00000372621 ECHDC1Q9NTX5 307 aa15.36■□□□□ 0.05
CTPS1-202ENST00000372621 RRP9O43818 475 aaKnown RBP15.35■□□□□ 0.05
CTPS1-202ENST00000372621 SYT1P21579 422 aa15.35■□□□□ 0.05
CTPS1-202ENST00000372621 FOXD4L6Q3SYB3 417 aaPredicted RBP15.35■□□□□ 0.05
CTPS1-202ENST00000372621 FOXD4L3Q6VB84 417 aaPredicted RBP15.35■□□□□ 0.05
CTPS1-202ENST00000372621 RNF214Q8ND24 703 aa15.35■□□□□ 0.05
CTPS1-202ENST00000372621 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.35■□□□□ 0.05
CTPS1-202ENST00000372621 LMTK3Q96Q04 1460 aa15.35■□□□□ 0.05
CTPS1-202ENST00000372621 STX6O43752 255 aa15.35■□□□□ 0.05
CTPS1-202ENST00000372621 PHF14O94880 888 aa15.35■□□□□ 0.05
CTPS1-202ENST00000372621 PTH1RQ03431 593 aa15.35■□□□□ 0.05
CTPS1-202ENST00000372621 CCDC39Q9UFE4 941 aa15.34■□□□□ 0.05
CTPS1-202ENST00000372621 UTYO14607 1347 aa15.34■□□□□ 0.05
CTPS1-202ENST00000372621 LARGE1O95461 756 aa15.34■□□□□ 0.05
CTPS1-202ENST00000372621 CASTP20810 708 aaKnown RBP15.34■□□□□ 0.05
CTPS1-202ENST00000372621 PSME1Q06323 249 aa15.34■□□□□ 0.05
CTPS1-202ENST00000372621 VPS53Q5VIR6 699 aa15.34■□□□□ 0.05
CTPS1-202ENST00000372621 RUFY2Q8WXA3 655 aa15.34■□□□□ 0.05
CTPS1-202ENST00000372621 TM6SF1Q9BZW5 370 aa15.34■□□□□ 0.05
CTPS1-202ENST00000372621 DIAPH3Q9NSV4 1193 aa15.34■□□□□ 0.05
CTPS1-202ENST00000372621 CNPY2Q9Y2B0 182 aa15.34■□□□□ 0.05
CTPS1-202ENST00000372621 OS9Q13438 667 aaPredicted RBP15.34■□□□□ 0.05
CTPS1-202ENST00000372621 ARHGEF25Q86VW2 580 aa15.34■□□□□ 0.05
CTPS1-202ENST00000372621 ERC1Q8IUD2 1116 aa15.34■□□□□ 0.05
CTPS1-202ENST00000372621 ZSWIM6Q9HCJ5 1215 aa15.34■□□□□ 0.05
CTPS1-202ENST00000372621 CPA1P15085 419 aa15.33■□□□□ 0.04
CTPS1-202ENST00000372621 ADCK5Q3MIX3 580 aa15.33■□□□□ 0.04
CTPS1-202ENST00000372621 KAZALD1Q96I82 304 aa15.33■□□□□ 0.04
CTPS1-202ENST00000372621 LARP6Q9BRS8 491 aaKnown RBP15.33■□□□□ 0.04
CTPS1-202ENST00000372621 PA2G4Q9UQ80 394 aaKnown RBP15.33■□□□□ 0.04
CTPS1-202ENST00000372621 F13A1P00488 732 aa15.33■□□□□ 0.04
CTPS1-202ENST00000372621 C9orf78Q9NZ63 289 aaPredicted RBP15.33■□□□□ 0.04
CTPS1-202ENST00000372621 NECTIN1Q15223 517 aa15.32■□□□□ 0.04
CTPS1-202ENST00000372621 ESCO1Q5FWF5 840 aa15.32■□□□□ 0.04
CTPS1-202ENST00000372621 EVI5LQ96CN4 794 aa15.32■□□□□ 0.04
CTPS1-202ENST00000372621 PRAMEF22A3QJZ6 481 aa15.32■□□□□ 0.04
CTPS1-202ENST00000372621 CWF19L2Q2TBE0 894 aaKnown RBP15.32■□□□□ 0.04
CTPS1-202ENST00000372621 CCDC183Q5T5S1 534 aa15.32■□□□□ 0.04
CTPS1-202ENST00000372621 RBM33Q96EV2 1170 aaKnown RBP15.32■□□□□ 0.04
CTPS1-202ENST00000372621 SNRKQ9NRH2 765 aa15.32■□□□□ 0.04
CTPS1-202ENST00000372621 UBE2HP62256 183 aa15.32■□□□□ 0.04
CTPS1-202ENST00000372621 HSP90AA2PQ14568 343 aaPredicted RBP15.32■□□□□ 0.04
CTPS1-202ENST00000372621 SMC3Q9UQE7 1217 aa15.32■□□□□ 0.04
CTPS1-202ENST00000372621 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.32■□□□□ 0.04
CTPS1-202ENST00000372621 GCP02774 474 aa15.31■□□□□ 0.04
CTPS1-202ENST00000372621 ST3GAL1Q11201 340 aa15.31■□□□□ 0.04
CTPS1-202ENST00000372621 C1orf141Q5JVX7 400 aa15.31■□□□□ 0.04
CTPS1-202ENST00000372621 FAM184AQ8NB25 1140 aa15.31■□□□□ 0.04
CTPS1-202ENST00000372621 GPATCH3Q96I76 525 aa15.31■□□□□ 0.04
CTPS1-202ENST00000372621 HDAC5Q9UQL6 1122 aa15.31■□□□□ 0.04
CTPS1-202ENST00000372621 ZNF142P52746 1687 aaPredicted RBP15.31■□□□□ 0.04
CTPS1-202ENST00000372621 SASH1O94885 1247 aa15.31■□□□□ 0.04
CTPS1-202ENST00000372621 IFIT2P09913 472 aaKnown RBP15.31■□□□□ 0.04
CTPS1-202ENST00000372621 UVSSAQ2YD98 709 aa15.31■□□□□ 0.04
CTPS1-202ENST00000372621 PRPF40BQ6NWY9 871 aaKnown RBP15.31■□□□□ 0.04
CTPS1-202ENST00000372621 LINS1Q8NG48 757 aa15.31■□□□□ 0.04
CTPS1-202ENST00000372621 PDRG1Q9NUG6 133 aa15.31■□□□□ 0.04
CTPS1-202ENST00000372621 CCDC171Q6TFL3 1326 aa15.3■□□□□ 0.04
CTPS1-202ENST00000372621 XPCQ01831 940 aaPredicted RBP15.3■□□□□ 0.04
CTPS1-202ENST00000372621 SUCLG2Q96I99 432 aa15.3■□□□□ 0.04
CTPS1-202ENST00000372621 TRPM3Q9HCF6 1732 aaPredicted RBP15.3■□□□□ 0.04
CTPS1-202ENST00000372621 ZBTB7CA1YPR0 619 aa15.3■□□□□ 0.04
CTPS1-202ENST00000372621 PDIA6Q15084 440 aa15.3■□□□□ 0.04
CTPS1-202ENST00000372621 KLHL34Q8N239 644 aa15.3■□□□□ 0.04
CTPS1-202ENST00000372621 ZSCAN31Q96LW9 406 aaPredicted RBP15.3■□□□□ 0.04
CTPS1-202ENST00000372621 JAKMIP1Q96N16 626 aaKnown RBP15.3■□□□□ 0.04
CTPS1-202ENST00000372621 SH2B1Q9NRF2 756 aaPredicted RBP15.3■□□□□ 0.04
CTPS1-202ENST00000372621 MTMR6Q9Y217 621 aa15.3■□□□□ 0.04
CTPS1-202ENST00000372621 MRC1P22897 1456 aa15.3■□□□□ 0.04
CTPS1-202ENST00000372621 GRM8O00222 908 aa15.3■□□□□ 0.04
CTPS1-202ENST00000372621 AACSQ86V21 672 aa15.3■□□□□ 0.04
CTPS1-202ENST00000372621 LETM1O95202 739 aaPredicted RBP15.29■□□□□ 0.04
CTPS1-202ENST00000372621 GJB2P29033 226 aa15.29■□□□□ 0.04
CTPS1-202ENST00000372621 CCDC83Q8IWF9 413 aa15.29■□□□□ 0.04
CTPS1-202ENST00000372621 MAP4K1Q92918 833 aa15.29■□□□□ 0.04
CTPS1-202ENST00000372621 ATP6V1DQ9Y5K8 247 aa15.29■□□□□ 0.04
CTPS1-202ENST00000372621 CYP46A1Q9Y6A2 500 aa15.29■□□□□ 0.04
CTPS1-202ENST00000372621 C5P01031 1676 aa15.29■□□□□ 0.04
CTPS1-202ENST00000372621 RGPD5Q99666 1765 aa15.29■□□□□ 0.04
CTPS1-202ENST00000372621 ANKLE2Q86XL3 938 aa15.29■□□□□ 0.04
CTPS1-202ENST00000372621 ANKRD24Q8TF21 1146 aa15.29■□□□□ 0.04
CTPS1-202ENST00000372621 EAF2Q96CJ1 260 aaPredicted RBP15.29■□□□□ 0.04
CTPS1-202ENST00000372621 BICC1Q9H694 974 aaKnown RBP15.28■□□□□ 0.04
CTPS1-202ENST00000372621 DDX21Q9NR30 783 aaKnown RBP eCLIP15.28■□□□□ 0.04
CTPS1-202ENST00000372621 ME3Q16798 604 aa15.28■□□□□ 0.04
CTPS1-202ENST00000372621 CSPP1Q1MSJ5 1256 aa15.28■□□□□ 0.04
CTPS1-202ENST00000372621 CREB3L3Q68CJ9 461 aa15.28■□□□□ 0.04
CTPS1-202ENST00000372621 FUCA2Q9BTY2 467 aa15.28■□□□□ 0.04
CTPS1-202ENST00000372621 SCN11AQ9UI33 1791 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms