RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 PI4K2BQ8TCG2 481 aa14.26□□□□□ -0.13
SNX21-205ENST00000372547 PHAXQ9H814 394 aaKnown RBP14.26□□□□□ -0.13
SNX21-205ENST00000372547 MRVI1Q9Y6F6 885 aa14.26□□□□□ -0.13
SNX21-205ENST00000372547 SOS1Q07889 1333 aaPredicted RBP14.26□□□□□ -0.13
SNX21-205ENST00000372547 STK3Q13188 491 aa14.26□□□□□ -0.13
SNX21-205ENST00000372547 CDC37L1Q7L3B6 337 aa14.26□□□□□ -0.13
SNX21-205ENST00000372547 CRB1P82279 1406 aa14.25□□□□□ -0.13
SNX21-205ENST00000372547 ME3Q16798 604 aa14.25□□□□□ -0.13
SNX21-205ENST00000372547 ESF1Q9H501 851 aaKnown RBP14.25□□□□□ -0.13
SNX21-205ENST00000372547 CBX8Q9HC52 389 aa14.25□□□□□ -0.13
SNX21-205ENST00000372547 CYP46A1Q9Y6A2 500 aa14.25□□□□□ -0.13
SNX21-205ENST00000372547 NPHP1O15259 732 aa14.25□□□□□ -0.13
SNX21-205ENST00000372547 KRT85P78386 507 aa14.25□□□□□ -0.13
SNX21-205ENST00000372547 CCDC112Q8NEF3 446 aa14.25□□□□□ -0.13
SNX21-205ENST00000372547 PREX1Q8TCU6 1659 aa14.24□□□□□ -0.13
SNX21-205ENST00000372547 TMEM131LA2VDJ0 1609 aa14.24□□□□□ -0.13
SNX21-205ENST00000372547 CTIFO43310 598 aaKnown RBP14.24□□□□□ -0.13
SNX21-205ENST00000372547 DNAJC25Q9H1X3 360 aa14.24□□□□□ -0.13
SNX21-205ENST00000372547 COL9A3Q14050 684 aaPredicted RBP14.23□□□□□ -0.13
SNX21-205ENST00000372547 BICD2Q8TD16 824 aa14.23□□□□□ -0.13
SNX21-205ENST00000372547 NBPF7P0C2Y1 421 aaPredicted RBP14.23□□□□□ -0.13
SNX21-205ENST00000372547 CEBPZQ03701 1054 aaKnown RBP14.23□□□□□ -0.13
SNX21-205ENST00000372547 ZSCAN25Q6NSZ9 544 aa14.23□□□□□ -0.13
SNX21-205ENST00000372547 FBXW7Q969H0 707 aa14.23□□□□□ -0.13
SNX21-205ENST00000372547 CLIP2Q9UDT6 1046 aa14.23□□□□□ -0.13
SNX21-205ENST00000372547 LTV1Q96GA3 475 aaPredicted RBP14.22□□□□□ -0.13
SNX21-205ENST00000372547 SPATA32Q96LK8 384 aa14.22□□□□□ -0.13
SNX21-205ENST00000372547 OGFRQ9NZT2 677 aa14.22□□□□□ -0.13
SNX21-205ENST00000372547 KIF1BPQ96EK5 621 aa14.22□□□□□ -0.13
SNX21-205ENST00000372547 TPCN1Q9ULQ1 816 aa14.22□□□□□ -0.13
SNX21-205ENST00000372547 RAB11FIP3O75154 756 aa14.22□□□□□ -0.13
SNX21-205ENST00000372547 ST3GAL1Q11201 340 aa14.22□□□□□ -0.13
SNX21-205ENST00000372547 ARID5BQ14865 1188 aa14.22□□□□□ -0.13
SNX21-205ENST00000372547 HDGFL1Q5TGJ6 251 aa14.22□□□□□ -0.13
SNX21-205ENST00000372547 SSH3Q8TE77 659 aa14.22□□□□□ -0.13
SNX21-205ENST00000372547 TTC21BQ7Z4L5 1316 aa14.21□□□□□ -0.13
SNX21-205ENST00000372547 PRR36Q9H6K5 1346 aa14.21□□□□□ -0.13
SNX21-205ENST00000372547 SMTNL1A8MU46 457 aa14.21□□□□□ -0.13
SNX21-205ENST00000372547 ANXA1P04083 346 aa14.21□□□□□ -0.13
SNX21-205ENST00000372547 AMPHP49418 695 aa14.21□□□□□ -0.13
SNX21-205ENST00000372547 ZNF165P49910 485 aa14.21□□□□□ -0.13
SNX21-205ENST00000372547 FOSBP53539 338 aa14.21□□□□□ -0.13
SNX21-205ENST00000372547 CACTINQ8WUQ7 758 aaKnown RBP14.21□□□□□ -0.13
SNX21-205ENST00000372547 FEZ1Q99689 392 aa14.21□□□□□ -0.13
SNX21-205ENST00000372547 TRMT1Q9NXH9 659 aaKnown RBP14.21□□□□□ -0.13
SNX21-205ENST00000372547 RIMBP3CA6NJZ7 1639 aa14.21□□□□□ -0.14
SNX21-205ENST00000372547 RIMBP3BA6NNM3 1639 aa14.21□□□□□ -0.14
SNX21-205ENST00000372547 RIMBP3Q9UFD9 1639 aa14.21□□□□□ -0.14
SNX21-205ENST00000372547 ZBTB22O15209 634 aa14.21□□□□□ -0.14
SNX21-205ENST00000372547 ZKSCAN1P17029 563 aaPredicted RBP14.21□□□□□ -0.14
SNX21-205ENST00000372547 ZNF75DP51815 510 aa14.21□□□□□ -0.14
SNX21-205ENST00000372547 VPS53Q5VIR6 699 aa14.21□□□□□ -0.14
SNX21-205ENST00000372547 CTNNA3Q9UI47 895 aa14.21□□□□□ -0.14
SNX21-205ENST00000372547 ACEP12821 1306 aa14.21□□□□□ -0.14
SNX21-205ENST00000372547 NR1I2O75469 434 aa14.2□□□□□ -0.14
SNX21-205ENST00000372547 CCDC144BQ3MJ40 725 aa14.2□□□□□ -0.14
SNX21-205ENST00000372547 CCDC144CPQ8IYA2 1237 aa14.2□□□□□ -0.14
SNX21-205ENST00000372547 METP08581 1390 aa14.2□□□□□ -0.14
SNX21-205ENST00000372547 A0A087WWV3 80 aa14.2□□□□□ -0.14
SNX21-205ENST00000372547 RUFY2Q8WXA3 655 aa14.2□□□□□ -0.14
SNX21-205ENST00000372547 DDX11Q96FC9 970 aa14.2□□□□□ -0.14
SNX21-205ENST00000372547 AOX1Q06278 1338 aa14.2□□□□□ -0.14
SNX21-205ENST00000372547 USP27XA6NNY8 438 aa14.19□□□□□ -0.14
SNX21-205ENST00000372547 CEP135Q66GS9 1140 aa14.19□□□□□ -0.14
SNX21-205ENST00000372547 LARP1Q6PKG0 1096 aaKnown RBP14.19□□□□□ -0.14
SNX21-205ENST00000372547 FILIP1Q7Z7B0 1213 aa14.19□□□□□ -0.14
SNX21-205ENST00000372547 IL17RAQ96F46 866 aa14.19□□□□□ -0.14
SNX21-205ENST00000372547 ZSCAN31Q96LW9 406 aaPredicted RBP14.19□□□□□ -0.14
SNX21-205ENST00000372547 SH2B1Q9NRF2 756 aaPredicted RBP14.19□□□□□ -0.14
SNX21-205ENST00000372547 ERICH4A6NGS2 130 aa14.19□□□□□ -0.14
SNX21-205ENST00000372547 TAF7Q15545 349 aaPredicted RBP14.19□□□□□ -0.14
SNX21-205ENST00000372547 NUTM2GQ5VZR2 741 aa14.19□□□□□ -0.14
SNX21-205ENST00000372547 BBXQ8WY36 941 aaPredicted RBP14.19□□□□□ -0.14
SNX21-205ENST00000372547 EYA1Q99502 592 aa14.19□□□□□ -0.14
SNX21-205ENST00000372547 RBM8AQ9Y5S9 174 aaKnown RBP14.19□□□□□ -0.14
SNX21-205ENST00000372547 RIMS1Q86UR5 1692 aaKnown RBP14.19□□□□□ -0.14
SNX21-205ENST00000372547 GOLGA6L19H0YKK7 550 aa14.18□□□□□ -0.14
SNX21-205ENST00000372547 CEBPAP49715 358 aaPredicted RBP14.18□□□□□ -0.14
SNX21-205ENST00000372547 FAM227BQ96M60 508 aa14.18□□□□□ -0.14
SNX21-205ENST00000372547 PA2G4Q9UQ80 394 aaKnown RBP14.18□□□□□ -0.14
SNX21-205ENST00000372547 ZSWIM6Q9HCJ5 1215 aa14.18□□□□□ -0.14
SNX21-205ENST00000372547 GLRX3O76003 335 aaKnown RBP14.17□□□□□ -0.14
SNX21-205ENST00000372547 IFIT2P09913 472 aaKnown RBP14.17□□□□□ -0.14
SNX21-205ENST00000372547 CLASRPQ8N2M8 674 aaKnown RBP14.17□□□□□ -0.14
SNX21-205ENST00000372547 SYTL4Q96C24 671 aaPredicted RBP14.17□□□□□ -0.14
SNX21-205ENST00000372547 DIP2BQ9P265 1576 aa14.17□□□□□ -0.14
SNX21-205ENST00000372547 GNAT3A8MTJ3 354 aa14.17□□□□□ -0.14
SNX21-205ENST00000372547 CREB3L3Q68CJ9 461 aa14.17□□□□□ -0.14
SNX21-205ENST00000372547 A2ML1A8K2U0 1454 aa14.17□□□□□ -0.14
SNX21-205ENST00000372547 PI4KAP2A4QPH2 592 aa14.17□□□□□ -0.14
SNX21-205ENST00000372547 PPFIA3O75145 1194 aa14.17□□□□□ -0.14
SNX21-205ENST00000372547 MAPK8IP2Q13387 824 aaPredicted RBP14.17□□□□□ -0.14
SNX21-205ENST00000372547 PI4KAP1Q8N8J0 262 aa14.17□□□□□ -0.14
SNX21-205ENST00000372547 ZNF215Q9UL58 517 aaPredicted RBP14.17□□□□□ -0.14
SNX21-205ENST00000372547 PAXBP1Q9Y5B6 917 aa14.17□□□□□ -0.14
SNX21-205ENST00000372547 EPB41L2O43491 1005 aaKnown RBP14.16□□□□□ -0.14
SNX21-205ENST00000372547 PLA2G4DQ86XP0 818 aa14.16□□□□□ -0.14
SNX21-205ENST00000372547 LEO1Q8WVC0 666 aaPredicted RBP14.16□□□□□ -0.14
SNX21-205ENST00000372547 TAF6LQ9Y6J9 622 aa14.16□□□□□ -0.14
SNX21-205ENST00000372547 TUBGCP6Q96RT7 1819 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms