RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 RREB1Q92766 1687 aa23.18■■□□□ 1.3
VEGFA-206ENST00000372077 BEND3Q5T5X7 828 aa23.18■■□□□ 1.3
VEGFA-206ENST00000372077 ANKRD13DQ6ZTN6 518 aa23.18■■□□□ 1.3
VEGFA-206ENST00000372077 COL5A3P25940 1745 aaPredicted RBP23.17■■□□□ 1.3
VEGFA-206ENST00000372077 ILDR1Q86SU0 546 aaPredicted RBP23.17■■□□□ 1.3
VEGFA-206ENST00000372077 INTS5Q6P9B9 1019 aaKnown RBP23.16■■□□□ 1.3
VEGFA-206ENST00000372077 ZBTB1Q9Y2K1 713 aa23.16■■□□□ 1.3
VEGFA-206ENST00000372077 RIC3Q7Z5B4 369 aa23.16■■□□□ 1.3
VEGFA-206ENST00000372077 PLBD2Q8NHP8 589 aa23.16■■□□□ 1.3
VEGFA-206ENST00000372077 PCDHB15Q9Y5E8 787 aa23.16■■□□□ 1.3
VEGFA-206ENST00000372077 SRCIN1Q9C0H9 1055 aa23.15■■□□□ 1.3
VEGFA-206ENST00000372077 TRIM37O94972 964 aa23.15■■□□□ 1.3
VEGFA-206ENST00000372077 TTLL7Q6ZT98 887 aa23.15■■□□□ 1.3
VEGFA-206ENST00000372077 CCDC87Q9NVE4 849 aa23.15■■□□□ 1.3
VEGFA-206ENST00000372077 IL6STP40189 918 aaPredicted RBP23.14■■□□□ 1.3
VEGFA-206ENST00000372077 CRKLP46109 303 aaKnown RBP23.14■■□□□ 1.3
VEGFA-206ENST00000372077 METTL22Q9BUU2 404 aaPredicted RBP23.14■■□□□ 1.29
VEGFA-206ENST00000372077 RTN4Q9NQC3 1192 aaKnown RBP23.14■■□□□ 1.29
VEGFA-206ENST00000372077 LINC00116Q8NCU8 138 aa23.13■■□□□ 1.29
VEGFA-206ENST00000372077 IBTKQ9P2D0 1353 aaPredicted RBP23.13■■□□□ 1.29
VEGFA-206ENST00000372077 ALDH1L1O75891 902 aa23.13■■□□□ 1.29
VEGFA-206ENST00000372077 MEIS3Q99687 375 aa23.13■■□□□ 1.29
VEGFA-206ENST00000372077 ARFGEF2Q9Y6D5 1785 aa23.12■■□□□ 1.29
VEGFA-206ENST00000372077 LINS1Q8NG48 757 aa23.12■■□□□ 1.29
VEGFA-206ENST00000372077 NUP188Q5SRE5 1749 aa23.12■■□□□ 1.29
VEGFA-206ENST00000372077 CCNL1Q9UK58 526 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-206ENST00000372077 MYH14Q7Z406 1995 aaKnown RBP23.12■■□□□ 1.29
VEGFA-206ENST00000372077 EIF5P55010 431 aaKnown RBP23.11■■□□□ 1.29
VEGFA-206ENST00000372077 CNTNAP4Q9C0A0 1308 aa23.11■■□□□ 1.29
VEGFA-206ENST00000372077 USP44Q9H0E7 712 aa23.1■■□□□ 1.29
VEGFA-206ENST00000372077 RC3H1Q5TC82 1133 aaKnown RBP23.1■■□□□ 1.29
VEGFA-206ENST00000372077 KCNQ4P56696 695 aa23.09■■□□□ 1.29
VEGFA-206ENST00000372077 KDM2BQ8NHM5 1336 aa23.09■■□□□ 1.29
VEGFA-206ENST00000372077 IGKV5-2P06315 115 aa23.09■■□□□ 1.29
VEGFA-206ENST00000372077 GNAI3P08754 354 aa23.09■■□□□ 1.29
VEGFA-206ENST00000372077 NEXNQ0ZGT2 675 aa23.09■■□□□ 1.29
VEGFA-206ENST00000372077 MYD88Q99836 296 aa23.08■■□□□ 1.29
VEGFA-206ENST00000372077 TAF1LQ8IZX4 1826 aa23.08■■□□□ 1.29
VEGFA-206ENST00000372077 IGHDP01880 384 aa23.08■■□□□ 1.28
VEGFA-206ENST00000372077 ZNF330Q9Y3S2 320 aaPredicted RBP23.08■■□□□ 1.28
VEGFA-206ENST00000372077 CWF19L2Q2TBE0 894 aaKnown RBP23.07■■□□□ 1.28
VEGFA-206ENST00000372077 KIF6Q6ZMV9 814 aa23.07■■□□□ 1.28
VEGFA-206ENST00000372077 C1orf115Q9H7X2 142 aa23.07■■□□□ 1.28
VEGFA-206ENST00000372077 MAP3K15Q6ZN16 1313 aa23.07■■□□□ 1.28
VEGFA-206ENST00000372077 ZBTB3Q9H5J0 574 aa23.07■■□□□ 1.28
VEGFA-206ENST00000372077 NEURL1BA8MQ27 555 aa23.06■■□□□ 1.28
VEGFA-206ENST00000372077 SLC27A3Q5K4L6 730 aa23.06■■□□□ 1.28
VEGFA-206ENST00000372077 PLSCR1O15162 318 aa23.05■■□□□ 1.28
VEGFA-206ENST00000372077 HDAC1Q13547 482 aaPredicted RBP23.05■■□□□ 1.28
VEGFA-206ENST00000372077 CENPQQ7L2Z9 268 aaPredicted RBP23.05■■□□□ 1.28
VEGFA-206ENST00000372077 LRRC4BQ9NT99 713 aa23.05■■□□□ 1.28
VEGFA-206ENST00000372077 ERVV-1B6SEH8 477 aa23.04■■□□□ 1.28
VEGFA-206ENST00000372077 RWDD1Q9H446 243 aaPredicted RBP23.04■■□□□ 1.28
VEGFA-206ENST00000372077 UTYO14607 1347 aa23.04■■□□□ 1.28
VEGFA-206ENST00000372077 GNAI2P04899 355 aa23.04■■□□□ 1.28
VEGFA-206ENST00000372077 DZIP3Q86Y13 1208 aaKnown RBP23.04■■□□□ 1.28
VEGFA-206ENST00000372077 GIGYF2Q6Y7W6 1299 aaKnown RBP23.03■■□□□ 1.28
VEGFA-206ENST00000372077 TNS1Q9HBL0 1735 aaKnown RBP23.03■■□□□ 1.28
VEGFA-206ENST00000372077 UBTFL1P0CB47 393 aaPredicted RBP23.03■■□□□ 1.28
VEGFA-206ENST00000372077 TCIRG1Q13488 830 aa23.03■■□□□ 1.28
VEGFA-206ENST00000372077 GCKRQ14397 625 aa23.03■■□□□ 1.28
VEGFA-206ENST00000372077 RPAP2Q8IXW5 612 aaPredicted RBP23.03■■□□□ 1.28
VEGFA-206ENST00000372077 RPS6KA4O75676 772 aa23.02■■□□□ 1.28
VEGFA-206ENST00000372077 NBPF7P0C2Y1 421 aaPredicted RBP23.02■■□□□ 1.28
VEGFA-206ENST00000372077 SIRT2Q8IXJ6 389 aa23.02■■□□□ 1.28
VEGFA-206ENST00000372077 ISCA1Q9BUE6 129 aa23.02■■□□□ 1.28
VEGFA-206ENST00000372077 C4BP0C0L5 1744 aa23.02■■□□□ 1.28
VEGFA-206ENST00000372077 COL15A1P39059 1388 aa23.02■■□□□ 1.28
VEGFA-206ENST00000372077 ANKRD44Q8N8A2 993 aa23.02■■□□□ 1.28
VEGFA-206ENST00000372077 TBC1D2BQ9UPU7 963 aa23.02■■□□□ 1.28
VEGFA-206ENST00000372077 GRM8O00222 908 aa23.01■■□□□ 1.27
VEGFA-206ENST00000372077 APBA3O96018 575 aa23.01■■□□□ 1.27
VEGFA-206ENST00000372077 CEP85Q6P2H3 762 aa23.01■■□□□ 1.27
VEGFA-206ENST00000372077 PROM2Q8N271 834 aa23.01■■□□□ 1.27
VEGFA-206ENST00000372077 C9orf78Q9NZ63 289 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-206ENST00000372077 ATP5J2-PTCD1G3V325 749 aa23.01■■□□□ 1.27
VEGFA-206ENST00000372077 TRIM28Q13263 835 aaKnown RBP23.01■■□□□ 1.27
VEGFA-206ENST00000372077 HLFQ16534 295 aa23.01■■□□□ 1.27
VEGFA-206ENST00000372077 AFDNP55196 1824 aaKnown RBP23.01■■□□□ 1.27
VEGFA-206ENST00000372077 A0A087WZG4 1122 aa23■■□□□ 1.27
VEGFA-206ENST00000372077 TXNRD1Q16881 649 aa23■■□□□ 1.27
VEGFA-206ENST00000372077 ARXQ96QS3 562 aa23■■□□□ 1.27
VEGFA-206ENST00000372077 HSP90AB3PQ58FF7 597 aa23■■□□□ 1.27
VEGFA-206ENST00000372077 CCDC191Q8NCU4 936 aa23■■□□□ 1.27
VEGFA-206ENST00000372077 HMGB2P26583 209 aaKnown RBP22.99■■□□□ 1.27
VEGFA-206ENST00000372077 DAXXQ9UER7 740 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-206ENST00000372077 LRRFIP2Q9Y608 721 aaKnown RBP22.99■■□□□ 1.27
VEGFA-206ENST00000372077 EP400Q96L91 3159 aa22.99■■□□□ 1.27
VEGFA-206ENST00000372077 CAMTA2O94983 1202 aa22.99■■□□□ 1.27
VEGFA-206ENST00000372077 HDAC5Q9UQL6 1122 aa22.98■■□□□ 1.27
VEGFA-206ENST00000372077 NUP98P52948 1817 aa22.98■■□□□ 1.27
VEGFA-206ENST00000372077 CWC25Q9NXE8 425 aaPredicted RBP22.98■■□□□ 1.27
VEGFA-206ENST00000372077 GNPATO15228 680 aa22.97■■□□□ 1.27
VEGFA-206ENST00000372077 IL27Q8NEV9 243 aa22.97■■□□□ 1.27
VEGFA-206ENST00000372077 RGPD3A6NKT7 1758 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-206ENST00000372077 RGPD4Q7Z3J3 1758 aa22.97■■□□□ 1.27
VEGFA-206ENST00000372077 ANKRD36CQ5JPF3 1778 aa22.97■■□□□ 1.27
VEGFA-206ENST00000372077 RTCBQ9Y3I0 505 aaKnown RBP22.97■■□□□ 1.27
VEGFA-206ENST00000372077 BCORQ6W2J9 1755 aa22.96■■□□□ 1.27
VEGFA-206ENST00000372077 RGL2O15211 777 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms