RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 RIC3Q7Z5B4 369 aa25.04■■□□□ 1.6
VEGFA-204ENST00000372064 KAZALD1Q96I82 304 aa25.04■■□□□ 1.6
VEGFA-204ENST00000372064 CNTROBQ8N137 903 aa25.03■■□□□ 1.6
VEGFA-204ENST00000372064 DCAF5Q96JK2 942 aa25.03■■□□□ 1.6
VEGFA-204ENST00000372064 IGKV5-2P06315 115 aa25.02■■□□□ 1.6
VEGFA-204ENST00000372064 ERC1Q8IUD2 1116 aa25.02■■□□□ 1.6
VEGFA-204ENST00000372064 TMX3Q96JJ7 454 aa25.02■■□□□ 1.6
VEGFA-204ENST00000372064 HSPA4P34932 840 aa25.02■■□□□ 1.6
VEGFA-204ENST00000372064 XAGE3Q8WTP9 111 aa25.02■■□□□ 1.6
VEGFA-204ENST00000372064 SGSM2O43147 1006 aa25.02■■□□□ 1.6
VEGFA-204ENST00000372064 PKP1Q13835 747 aa25.02■■□□□ 1.6
VEGFA-204ENST00000372064 CPDO75976 1380 aa25.02■■□□□ 1.6
VEGFA-204ENST00000372064 MRE11P49959 708 aa25.01■■□□□ 1.59
VEGFA-204ENST00000372064 CUL4AQ13619 759 aa25.01■■□□□ 1.59
VEGFA-204ENST00000372064 BRINP3Q76B58 766 aa25.01■■□□□ 1.59
VEGFA-204ENST00000372064 CLASRPQ8N2M8 674 aaKnown RBP25.01■■□□□ 1.59
VEGFA-204ENST00000372064 BICC1Q9H694 974 aaKnown RBP25.01■■□□□ 1.59
VEGFA-204ENST00000372064 USP16Q9Y5T5 823 aa25.01■■□□□ 1.59
VEGFA-204ENST00000372064 GLRX3O76003 335 aaKnown RBP25.01■■□□□ 1.59
VEGFA-204ENST00000372064 COPS6Q7L5N1 327 aa25.01■■□□□ 1.59
VEGFA-204ENST00000372064 ARXQ96QS3 562 aa25.01■■□□□ 1.59
VEGFA-204ENST00000372064 DNAJC5Q9H3Z4 198 aa25.01■■□□□ 1.59
VEGFA-204ENST00000372064 LARP1Q6PKG0 1096 aaKnown RBP25■■□□□ 1.59
VEGFA-204ENST00000372064 TTC5Q8N0Z6 440 aa25■■□□□ 1.59
VEGFA-204ENST00000372064 RAD50Q92878 1312 aa24.99■■□□□ 1.59
VEGFA-204ENST00000372064 PIP4K2AP48426 406 aaPredicted RBP24.99■■□□□ 1.59
VEGFA-204ENST00000372064 ZDHHC9Q9Y397 364 aa24.99■■□□□ 1.59
VEGFA-204ENST00000372064 RTN4Q9NQC3 1192 aaKnown RBP24.99■■□□□ 1.59
VEGFA-204ENST00000372064 SNRPA1P09661 255 aaKnown RBP24.99■■□□□ 1.59
VEGFA-204ENST00000372064 KLHL40Q2TBA0 621 aa24.99■■□□□ 1.59
VEGFA-204ENST00000372064 PARP4Q9UKK3 1724 aaKnown RBP24.98■■□□□ 1.59
VEGFA-204ENST00000372064 NEURL1BA8MQ27 555 aa24.97■■□□□ 1.59
VEGFA-204ENST00000372064 LRP10Q7Z4F1 713 aa24.97■■□□□ 1.59
VEGFA-204ENST00000372064 INTS4Q96HW7 963 aaKnown RBP24.97■■□□□ 1.59
VEGFA-204ENST00000372064 LSG1Q9H089 658 aaKnown RBP24.97■■□□□ 1.59
VEGFA-204ENST00000372064 NEXNQ0ZGT2 675 aa24.97■■□□□ 1.59
VEGFA-204ENST00000372064 MYD88Q99836 296 aa24.97■■□□□ 1.59
VEGFA-204ENST00000372064 ECHDC1Q9NTX5 307 aa24.97■■□□□ 1.59
VEGFA-204ENST00000372064 CABP4P57796 275 aa24.96■■□□□ 1.59
VEGFA-204ENST00000372064 FMNL2Q96PY5 1086 aa24.96■■□□□ 1.59
VEGFA-204ENST00000372064 GRPEL1Q9HAV7 217 aa24.96■■□□□ 1.59
VEGFA-204ENST00000372064 METTL22Q9BUU2 404 aaPredicted RBP24.96■■□□□ 1.59
VEGFA-204ENST00000372064 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.96■■□□□ 1.59
VEGFA-204ENST00000372064 XIRP1Q702N8 1843 aaKnown RBP24.95■■□□□ 1.58
VEGFA-204ENST00000372064 GLI3P10071 1580 aa24.95■■□□□ 1.58
VEGFA-204ENST00000372064 IFIT2P09913 472 aaKnown RBP24.95■■□□□ 1.58
VEGFA-204ENST00000372064 GCKRQ14397 625 aa24.95■■□□□ 1.58
VEGFA-204ENST00000372064 MCTP1Q6DN14 999 aa24.95■■□□□ 1.58
VEGFA-204ENST00000372064 GPATCH3Q96I76 525 aa24.95■■□□□ 1.58
VEGFA-204ENST00000372064 UPF3BQ9BZI7 483 aaKnown RBP24.95■■□□□ 1.58
VEGFA-204ENST00000372064 SASH1O94885 1247 aa24.94■■□□□ 1.58
VEGFA-204ENST00000372064 ANKRD13DQ6ZTN6 518 aa24.94■■□□□ 1.58
VEGFA-204ENST00000372064 PRDM11Q9NQV5 511 aa24.94■■□□□ 1.58
VEGFA-204ENST00000372064 AACSQ86V21 672 aa24.94■■□□□ 1.58
VEGFA-204ENST00000372064 LMBRD1Q9NUN5 540 aa24.94■■□□□ 1.58
VEGFA-204ENST00000372064 CWC27Q6UX04 472 aaKnown RBP24.93■■□□□ 1.58
VEGFA-204ENST00000372064 PANK2Q9BZ23 570 aa24.93■■□□□ 1.58
VEGFA-204ENST00000372064 NOL8Q76FK4 1167 aaKnown RBP24.93■■□□□ 1.58
VEGFA-204ENST00000372064 FAM43AQ8N2R8 423 aa24.93■■□□□ 1.58
VEGFA-204ENST00000372064 G3BP1Q13283 466 aaKnown RBP eCLIP24.92■■□□□ 1.58
VEGFA-204ENST00000372064 EPHA10Q5JZY3 1008 aa24.92■■□□□ 1.58
VEGFA-204ENST00000372064 GAS2L3Q86XJ1 694 aa24.92■■□□□ 1.58
VEGFA-204ENST00000372064 DDX49Q9Y6V7 483 aaKnown RBP24.92■■□□□ 1.58
VEGFA-204ENST00000372064 LAMB4A4D0S4 1761 aa24.92■■□□□ 1.58
VEGFA-204ENST00000372064 SIL1Q9H173 461 aa24.92■■□□□ 1.58
VEGFA-204ENST00000372064 SNX14Q9Y5W7 946 aa24.92■■□□□ 1.58
VEGFA-204ENST00000372064 KLHDC4Q8TBB5 520 aa24.91■■□□□ 1.58
VEGFA-204ENST00000372064 TOM1L2Q6ZVM7 507 aa24.91■■□□□ 1.58
VEGFA-204ENST00000372064 JARID2Q92833 1246 aaPredicted RBP24.91■■□□□ 1.58
VEGFA-204ENST00000372064 EAF2Q96CJ1 260 aaPredicted RBP24.91■■□□□ 1.58
VEGFA-204ENST00000372064 WDR17Q8IZU2 1322 aa24.91■■□□□ 1.58
VEGFA-204ENST00000372064 RUFY2Q8WXA3 655 aa24.89■■□□□ 1.58
VEGFA-204ENST00000372064 EVI5LQ96CN4 794 aa24.89■■□□□ 1.58
VEGFA-204ENST00000372064 COL15A1P39059 1388 aa24.89■■□□□ 1.58
VEGFA-204ENST00000372064 BRD1O95696 1058 aa24.89■■□□□ 1.57
VEGFA-204ENST00000372064 KIAA1211Q6ZU35 1233 aa24.89■■□□□ 1.57
VEGFA-204ENST00000372064 CCDC8Q9H0W5 538 aaPredicted RBP24.89■■□□□ 1.57
VEGFA-204ENST00000372064 DIAPH3Q9NSV4 1193 aa24.89■■□□□ 1.57
VEGFA-204ENST00000372064 ARFGEF2Q9Y6D5 1785 aa24.88■■□□□ 1.57
VEGFA-204ENST00000372064 ZCRB1Q8TBF4 217 aaKnown RBP24.88■■□□□ 1.57
VEGFA-204ENST00000372064 TTC14Q96N46 770 aa24.88■■□□□ 1.57
VEGFA-204ENST00000372064 SLAIN2Q9P270 581 aa24.88■■□□□ 1.57
VEGFA-204ENST00000372064 SOS2Q07890 1332 aaPredicted RBP24.88■■□□□ 1.57
VEGFA-204ENST00000372064 TLR7Q9NYK1 1049 aaKnown RBP24.87■■□□□ 1.57
VEGFA-204ENST00000372064 RASEFQ8IZ41 740 aa24.86■■□□□ 1.57
VEGFA-204ENST00000372064 ATP5J2-PTCD1G3V325 749 aa24.86■■□□□ 1.57
VEGFA-204ENST00000372064 PTCD1O75127 700 aaKnown RBP24.86■■□□□ 1.57
VEGFA-204ENST00000372064 PCDH11XQ9BZA7 1347 aa24.86■■□□□ 1.57
VEGFA-204ENST00000372064 PCDH11YQ9BZA8 1340 aa24.86■■□□□ 1.57
VEGFA-204ENST00000372064 ZNF335Q9H4Z2 1342 aaPredicted RBP24.86■■□□□ 1.57
VEGFA-204ENST00000372064 AFDNP55196 1824 aaKnown RBP24.85■■□□□ 1.57
VEGFA-204ENST00000372064 KCNB2Q92953 911 aa24.85■■□□□ 1.57
VEGFA-204ENST00000372064 UBE3BQ7Z3V4 1068 aa24.85■■□□□ 1.57
VEGFA-204ENST00000372064 COL5A2P05997 1499 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-204ENST00000372064 COPRSQ9NQ92 184 aa24.83■■□□□ 1.57
VEGFA-204ENST00000372064 SNRKQ9NRH2 765 aa24.83■■□□□ 1.57
VEGFA-204ENST00000372064 UBR2Q8IWV8 1755 aa24.83■■□□□ 1.57
VEGFA-204ENST00000372064 NBPF26B4DH59 902 aa24.83■■□□□ 1.57
VEGFA-204ENST00000372064 ZNF445P59923 1031 aa24.83■■□□□ 1.57
VEGFA-204ENST00000372064 NBPF14Q5TI25 921 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms