RNA–Protein interactions for RNA: ENST00000372059.6

AMMECR1-203, Transcript of Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, humanhuman

TSL 1 (best) BASIC

Gene AMMECR1, Length 3,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMMECR1-203ENST00000372059 ZNF75DP51815 510 aa17.21■□□□□ 0.35
AMMECR1-203ENST00000372059 MAP3K11Q16584 847 aa17.21■□□□□ 0.35
AMMECR1-203ENST00000372059 PLA2G4DQ86XP0 818 aa17.21■□□□□ 0.35
AMMECR1-203ENST00000372059 IL1RAPL2Q9NP60 686 aa17.21■□□□□ 0.35
AMMECR1-203ENST00000372059 TNRQ92752 1358 aa17.21■□□□□ 0.35
AMMECR1-203ENST00000372059 RAD50Q92878 1312 aa17.21■□□□□ 0.35
AMMECR1-203ENST00000372059 ERICH4A6NGS2 130 aa17.21■□□□□ 0.35
AMMECR1-203ENST00000372059 FAM173BQ6P4H8 233 aa17.21■□□□□ 0.35
AMMECR1-203ENST00000372059 TRIM5Q9C035 493 aa17.21■□□□□ 0.35
AMMECR1-203ENST00000372059 ZNF215Q9UL58 517 aaPredicted RBP17.21■□□□□ 0.35
AMMECR1-203ENST00000372059 AMOTL2Q9Y2J4 779 aa17.21■□□□□ 0.35
AMMECR1-203ENST00000372059 CPS1P31327 1500 aa17.2■□□□□ 0.34
AMMECR1-203ENST00000372059 VPS37CA5D8V6 355 aaPredicted RBP17.2■□□□□ 0.34
AMMECR1-203ENST00000372059 USP27XA6NNY8 438 aa17.2■□□□□ 0.34
AMMECR1-203ENST00000372059 NUP62CLQ9H1M0 184 aa17.2■□□□□ 0.34
AMMECR1-203ENST00000372059 MAPK8IP2Q13387 824 aaPredicted RBP17.2■□□□□ 0.34
AMMECR1-203ENST00000372059 KLHL34Q8N239 644 aa17.2■□□□□ 0.34
AMMECR1-203ENST00000372059 RBM6P78332 1123 aaKnown RBP17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 ST3GAL1Q11201 340 aa17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 CEP135Q66GS9 1140 aa17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 FAM53CQ9NYF3 392 aa17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 LSG1Q9H089 658 aaKnown RBP17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 SGSM2O43147 1006 aa17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 CCT4P50991 539 aaKnown RBP17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 HAP1P54257 671 aaPredicted RBP17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 ARID5BQ14865 1188 aa17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 FBXO38Q6PIJ6 1188 aa17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 ZNF397Q8NF99 534 aaPredicted RBP17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 HYPKQ9NX55 129 aa17.19■□□□□ 0.34
AMMECR1-203ENST00000372059 USHBP1Q8N6Y0 703 aa17.18■□□□□ 0.34
AMMECR1-203ENST00000372059 CDK12Q9NYV4 1490 aaPredicted RBP17.18■□□□□ 0.34
AMMECR1-203ENST00000372059 TTC21BQ7Z4L5 1316 aa17.18■□□□□ 0.34
AMMECR1-203ENST00000372059 CASTP20810 708 aaKnown RBP17.18■□□□□ 0.34
AMMECR1-203ENST00000372059 CDK11BP21127 795 aaKnown RBP17.18■□□□□ 0.34
AMMECR1-203ENST00000372059 DACT1Q9NYF0 836 aa17.18■□□□□ 0.34
AMMECR1-203ENST00000372059 CCDC66A2RUB6 948 aa17.17■□□□□ 0.34
AMMECR1-203ENST00000372059 HDGFP51858 240 aaKnown RBP17.17■□□□□ 0.34
AMMECR1-203ENST00000372059 FERMT3Q86UX7 667 aa17.17■□□□□ 0.34
AMMECR1-203ENST00000372059 SPG7Q9UQ90 795 aa17.17■□□□□ 0.34
AMMECR1-203ENST00000372059 AMPHP49418 695 aa17.17■□□□□ 0.34
AMMECR1-203ENST00000372059 ATP8B2P98198 1209 aa17.17■□□□□ 0.34
AMMECR1-203ENST00000372059 TIGD1Q96MW7 591 aa17.17■□□□□ 0.34
AMMECR1-203ENST00000372059 CLIP2Q9UDT6 1046 aa17.17■□□□□ 0.34
AMMECR1-203ENST00000372059 ELF2Q15723 593 aa17.17■□□□□ 0.34
AMMECR1-203ENST00000372059 LMOD2Q6P5Q4 547 aa17.17■□□□□ 0.34
AMMECR1-203ENST00000372059 IPO4Q8TEX9 1081 aaKnown RBP17.17■□□□□ 0.34
AMMECR1-203ENST00000372059 EPB41L2O43491 1005 aaKnown RBP17.16■□□□□ 0.34
AMMECR1-203ENST00000372059 PLCD3Q8N3E9 789 aa17.16■□□□□ 0.34
AMMECR1-203ENST00000372059 TNMDQ9H2S6 317 aa17.16■□□□□ 0.34
AMMECR1-203ENST00000372059 ERBB3P21860 1342 aa17.16■□□□□ 0.34
AMMECR1-203ENST00000372059 CAPN2P17655 700 aa17.16■□□□□ 0.34
AMMECR1-203ENST00000372059 ADCK5Q3MIX3 580 aa17.16■□□□□ 0.34
AMMECR1-203ENST00000372059 NECAB1Q8N987 351 aa17.16■□□□□ 0.34
AMMECR1-203ENST00000372059 DDX54Q8TDD1 881 aaKnown RBP17.16■□□□□ 0.34
AMMECR1-203ENST00000372059 EID1Q9Y6B2 187 aa17.16■□□□□ 0.34
AMMECR1-203ENST00000372059 NLRP6P59044 892 aa17.15■□□□□ 0.34
AMMECR1-203ENST00000372059 ZNF446Q9NWS9 450 aa17.15■□□□□ 0.34
AMMECR1-203ENST00000372059 TDRD7Q8NHU6 1098 aaKnown RBP17.15■□□□□ 0.34
AMMECR1-203ENST00000372059 CDC37L1Q7L3B6 337 aa17.15■□□□□ 0.34
AMMECR1-203ENST00000372059 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.15■□□□□ 0.34
AMMECR1-203ENST00000372059 PI4K2BQ8TCG2 481 aa17.15■□□□□ 0.34
AMMECR1-203ENST00000372059 DNAJC25Q9H1X3 360 aa17.15■□□□□ 0.34
AMMECR1-203ENST00000372059 LRRFIP2Q9Y608 721 aaKnown RBP17.15■□□□□ 0.34
AMMECR1-203ENST00000372059 CWC27Q6UX04 472 aaKnown RBP17.14■□□□□ 0.33
AMMECR1-203ENST00000372059 ME3Q16798 604 aa17.14■□□□□ 0.33
AMMECR1-203ENST00000372059 TMEM2Q9UHN6 1383 aa17.14■□□□□ 0.33
AMMECR1-203ENST00000372059 EDC4Q6P2E9 1401 aaKnown RBP17.14■□□□□ 0.33
AMMECR1-203ENST00000372059 NPHP1O15259 732 aa17.13■□□□□ 0.33
AMMECR1-203ENST00000372059 ZNF165P49910 485 aa17.13■□□□□ 0.33
AMMECR1-203ENST00000372059 NYAP1Q6ZVC0 841 aa17.13■□□□□ 0.33
AMMECR1-203ENST00000372059 LRRC8AQ8IWT6 810 aa17.13■□□□□ 0.33
AMMECR1-203ENST00000372059 KRT85P78386 507 aa17.13■□□□□ 0.33
AMMECR1-203ENST00000372059 TFIP11Q9UBB9 837 aaKnown RBP17.13■□□□□ 0.33
AMMECR1-203ENST00000372059 COL9A3Q14050 684 aaPredicted RBP17.12■□□□□ 0.33
AMMECR1-203ENST00000372059 TRERF1Q96PN7 1200 aa17.12■□□□□ 0.33
AMMECR1-203ENST00000372059 TULP2O00295 520 aa17.12■□□□□ 0.33
AMMECR1-203ENST00000372059 JAKMIP1Q96N16 626 aaKnown RBP17.12■□□□□ 0.33
AMMECR1-203ENST00000372059 PDRG1Q9NUG6 133 aa17.12■□□□□ 0.33
AMMECR1-203ENST00000372059 TRMT1Q9NXH9 659 aaKnown RBP17.12■□□□□ 0.33
AMMECR1-203ENST00000372059 AOX1Q06278 1338 aa17.12■□□□□ 0.33
AMMECR1-203ENST00000372059 MAP3K19Q56UN5 1328 aa17.12■□□□□ 0.33
AMMECR1-203ENST00000372059 PTPN14Q15678 1187 aa17.12■□□□□ 0.33
AMMECR1-203ENST00000372059 AATKQ6ZMQ8 1374 aa17.11■□□□□ 0.33
AMMECR1-203ENST00000372059 NR1I2O75469 434 aa17.11■□□□□ 0.33
AMMECR1-203ENST00000372059 PTH1RQ03431 593 aa17.11■□□□□ 0.33
AMMECR1-203ENST00000372059 LARP1BQ659C4 914 aaKnown RBP17.11■□□□□ 0.33
AMMECR1-203ENST00000372059 RBM43Q6ZSC3 357 aaKnown RBP17.11■□□□□ 0.33
AMMECR1-203ENST00000372059 CRB1P82279 1406 aa17.11■□□□□ 0.33
AMMECR1-203ENST00000372059 TTC21AQ8NDW8 1320 aa17.11■□□□□ 0.33
AMMECR1-203ENST00000372059 ELP1O95163 1332 aa17.1■□□□□ 0.33
AMMECR1-203ENST00000372059 GNAI3P08754 354 aa17.1■□□□□ 0.33
AMMECR1-203ENST00000372059 KIF1BPQ96EK5 621 aa17.1■□□□□ 0.33
AMMECR1-203ENST00000372059 ERO1AQ96HE7 468 aa17.1■□□□□ 0.33
AMMECR1-203ENST00000372059 ATP7BP35670 1465 aa17.1■□□□□ 0.33
AMMECR1-203ENST00000372059 KCNA6P17658 529 aa17.1■□□□□ 0.33
AMMECR1-203ENST00000372059 MTHFSDQ2M296 383 aaKnown RBP17.1■□□□□ 0.33
AMMECR1-203ENST00000372059 VPS53Q5VIR6 699 aa17.1■□□□□ 0.33
AMMECR1-203ENST00000372059 CLSTN2Q9H4D0 955 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms