RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 NOL10Q9BSC4 688 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 NDUFB9Q9Y6M9 179 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 TTC21BQ7Z4L5 1316 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 MINDY4BA8MYZ0 360 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 BIN1O00499 593 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 GLRX3O76003 335 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 PDCP20941 246 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 TSR1Q2NL82 804 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 MRPL50Q8N5N7 158 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 CWC22Q9HCG8 908 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 STRCP1A6NGW2 1772 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 METTL24Q5JXM2 366 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 CHST3Q7LGC8 479 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 ASXL1Q8IXJ9 1541 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 XRCC6P12956 609 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 TTC22Q5TAA0 569 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 PPP1R1BQ9UD71 204 aaPredicted RBP10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 CCDC39Q9UFE4 941 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 TMEM2Q9UHN6 1383 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 ADGRB1O14514 1584 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 IKQ13123 557 aaPredicted RBP10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 PIK3C2GO75747 1445 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 PDE1AP54750 535 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 HSP90AA4PQ58FG1 418 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 EYA1Q99502 592 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 CCDC173Q0VFZ6 552 aa10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 COPS6Q7L5N1 327 aa10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 DDX17Q92841 729 aaKnown RBP10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 TMX3Q96JJ7 454 aa10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 ZBTB40Q9NUA8 1239 aa10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 A0A1W2PP64 1363 aa10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 RALGAPBQ86X10 1494 aa10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 NAP1L1P55209 391 aaKnown RBP10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 GIMAP6Q6P9H5 292 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 KRT28Q7Z3Y7 464 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 RHPN1Q8TCX5 695 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 RAI14Q9P0K7 980 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 LRP2BPQ9P2M1 347 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 IFIT1P09914 478 aaKnown RBP10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 CCDC192P0DO97 292 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 TDO2P48775 406 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 TMX1Q9H3N1 280 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 DBF4Q9UBU7 674 aaPredicted RBP10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 POLR3DP05423 398 aaPredicted RBP10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 HCLS1P14317 486 aaPredicted RBP10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 HSPA2P54652 639 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 ANKRD24Q8TF21 1146 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 TRIM35Q9UPQ4 493 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 XIRP1Q702N8 1843 aaKnown RBP10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 SERPINC1P01008 464 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 DHX8Q14562 1220 aaKnown RBP10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 XAGE3Q8WTP9 111 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 NUP62CLQ9H1M0 184 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 WWC3Q9ULE0 1092 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 A0A0U1RQG5 324 aaPredicted RBP10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 TNNT3P45378 269 aaPredicted RBP10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 FAM173BQ6P4H8 233 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 LARP1Q6PKG0 1096 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 NFATC2IPQ8NCF5 419 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 MNS1Q8NEH6 495 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 TPM1P09493 284 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 KCNA6P17658 529 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 PRDM10Q9NQV6 1147 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 CIZ1Q9ULV3 898 aaPredicted RBP10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 PLEKHG1Q9ULL1 1385 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 UQCRHLA0A096LP55 91 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 UQCRHP07919 91 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 KLHL10Q6JEL2 608 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 TRIM34Q9BYJ4 488 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 ECHDC1Q9NTX5 307 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 TRMT1Q9NXH9 659 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 ADAMTS13Q76LX8 1427 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 MAP3K19Q56UN5 1328 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 ALKQ9UM73 1620 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 GJB2P29033 226 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 HDAC1Q13547 482 aaPredicted RBP10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 AMOTL1Q8IY63 956 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 HELBQ8NG08 1087 aaPredicted RBP10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 ABCC11Q96J66 1382 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 ZHX3Q9H4I2 956 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 ZNF219Q9P2Y4 722 aaPredicted RBP10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 OLFM4Q6UX06 510 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 TRMT1LQ7Z2T5 733 aaKnown RBP10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 ANKRD44Q8N8A2 993 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 CPS1P31327 1500 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 HIP1O00291 1037 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 PLEKHM2Q8IWE5 1019 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 LGR6Q9HBX8 967 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 TRMT112Q9UI30 125 aaKnown RBP10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 CNPY2Q9Y2B0 182 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 ANKRD36BQ8N2N9 1353 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 SART3Q15020 963 aaKnown RBP10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 CEP85Q6P2H3 762 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 KCNH5Q8NCM2 988 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 BRF1Q92994 677 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 LIMCH1Q9UPQ0 1083 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 RIMS2Q9UQ26 1411 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 IPO7O95373 1038 aaKnown RBP10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 ZBTB7BO15156 539 aaPredicted RBP10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 MAPK8IP2Q13387 824 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms