RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 C2CD5Q86YS7 1000 aa19.99■□□□□ 0.79
SS18L1-202ENST00000370848 TBC1D2BQ9UPU7 963 aa19.99■□□□□ 0.79
SS18L1-202ENST00000370848 USP16Q9Y5T5 823 aa19.99■□□□□ 0.79
SS18L1-202ENST00000370848 SNRPA1P09661 255 aaKnown RBP19.98■□□□□ 0.79
SS18L1-202ENST00000370848 RASSF7Q02833 373 aa19.98■□□□□ 0.79
SS18L1-202ENST00000370848 DNAJC5GQ8N7S2 189 aa19.98■□□□□ 0.79
SS18L1-202ENST00000370848 CCDC88AQ3V6T2 1871 aa19.98■□□□□ 0.79
SS18L1-202ENST00000370848 LTBP3Q9NS15 1303 aa19.98■□□□□ 0.79
SS18L1-202ENST00000370848 TMPOP42166 694 aaKnown RBP19.97■□□□□ 0.79
SS18L1-202ENST00000370848 RUNDC1Q96C34 613 aa19.97■□□□□ 0.79
SS18L1-202ENST00000370848 RIPK4P57078 832 aa19.96■□□□□ 0.79
SS18L1-202ENST00000370848 BICDL1Q6ZP65 573 aa19.96■□□□□ 0.79
SS18L1-202ENST00000370848 DZIP3Q86Y13 1208 aaKnown RBP19.96■□□□□ 0.79
SS18L1-202ENST00000370848 MRS2Q9HD23 443 aa19.96■□□□□ 0.79
SS18L1-202ENST00000370848 KLRG2A4D1S0 409 aaPredicted RBP19.95■□□□□ 0.78
SS18L1-202ENST00000370848 GLTPD2A6NH11 291 aa19.95■□□□□ 0.78
SS18L1-202ENST00000370848 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
SS18L1-202ENST00000370848 SETDB2Q96T68 719 aa19.95■□□□□ 0.78
SS18L1-202ENST00000370848 MIS18AQ9NYP9 233 aa19.95■□□□□ 0.78
SS18L1-202ENST00000370848 PRAMEF22A3QJZ6 481 aa19.94■□□□□ 0.78
SS18L1-202ENST00000370848 STYK1Q6J9G0 422 aa19.94■□□□□ 0.78
SS18L1-202ENST00000370848 CNBD1Q8NA66 436 aa19.94■□□□□ 0.78
SS18L1-202ENST00000370848 SLX4Q8IY92 1834 aa19.94■□□□□ 0.78
SS18L1-202ENST00000370848 NBPF26B4DH59 902 aa19.93■□□□□ 0.78
SS18L1-202ENST00000370848 SRGNP10124 158 aa19.93■□□□□ 0.78
SS18L1-202ENST00000370848 TAF7Q15545 349 aaPredicted RBP19.93■□□□□ 0.78
SS18L1-202ENST00000370848 NBPF10Q6P3W6 841 aaKnown RBP19.93■□□□□ 0.78
SS18L1-202ENST00000370848 NBPF15Q8N660 670 aa19.93■□□□□ 0.78
SS18L1-202ENST00000370848 PNISRQ8TF01 805 aaKnown RBP19.92■□□□□ 0.78
SS18L1-202ENST00000370848 IFFO2Q5TF58 517 aa19.91■□□□□ 0.78
SS18L1-202ENST00000370848 NPM2Q86SE8 214 aaKnown RBP19.91■□□□□ 0.78
SS18L1-202ENST00000370848 C16orf71Q8IYS4 520 aaPredicted RBP19.91■□□□□ 0.78
SS18L1-202ENST00000370848 RRAGCQ9HB90 399 aa19.91■□□□□ 0.78
SS18L1-202ENST00000370848 ZNF652Q9Y2D9 606 aa19.91■□□□□ 0.78
SS18L1-202ENST00000370848 ZNF330Q9Y3S2 320 aaPredicted RBP19.91■□□□□ 0.78
SS18L1-202ENST00000370848 CACNA1SQ13698 1873 aa19.9■□□□□ 0.78
SS18L1-202ENST00000370848 ST5P78524 1137 aa19.9■□□□□ 0.78
SS18L1-202ENST00000370848 CNKSR1Q969H4 720 aa19.9■□□□□ 0.78
SS18L1-202ENST00000370848 TRIM35Q9UPQ4 493 aa19.9■□□□□ 0.78
SS18L1-202ENST00000370848 RIC1Q4ADV7 1423 aa19.9■□□□□ 0.78
SS18L1-202ENST00000370848 APAF1O14727 1248 aa19.89■□□□□ 0.77
SS18L1-202ENST00000370848 SOGA3Q5TF21 947 aa19.89■□□□□ 0.77
SS18L1-202ENST00000370848 SMC1BQ8NDV3 1235 aa19.89■□□□□ 0.77
SS18L1-202ENST00000370848 C7orf43Q8WVR3 580 aa19.89■□□□□ 0.77
SS18L1-202ENST00000370848 MASTLQ96GX5 879 aa19.89■□□□□ 0.77
SS18L1-202ENST00000370848 VEGFAP15692 232 aaPredicted RBP19.88■□□□□ 0.77
SS18L1-202ENST00000370848 PRPF40BQ6NWY9 871 aaKnown RBP19.88■□□□□ 0.77
SS18L1-202ENST00000370848 PCNTO95613 3336 aa19.88■□□□□ 0.77
SS18L1-202ENST00000370848 SNED1Q8TER0 1413 aa19.87■□□□□ 0.77
SS18L1-202ENST00000370848 IBTKQ9P2D0 1353 aaPredicted RBP19.87■□□□□ 0.77
SS18L1-202ENST00000370848 POTECB2RU33 542 aa19.87■□□□□ 0.77
SS18L1-202ENST00000370848 C21orf2O43822 256 aa19.87■□□□□ 0.77
SS18L1-202ENST00000370848 PIP4K2AP48426 406 aaPredicted RBP19.87■□□□□ 0.77
SS18L1-202ENST00000370848 LMOD3Q0VAK6 560 aa19.87■□□□□ 0.77
SS18L1-202ENST00000370848 JMYQ8N9B5 988 aa19.87■□□□□ 0.77
SS18L1-202ENST00000370848 ZNF622Q969S3 477 aaKnown RBP eCLIP19.87■□□□□ 0.777e-6■■□□□ 12.8
SS18L1-202ENST00000370848 NUP98P52948 1817 aa19.87■□□□□ 0.77
SS18L1-202ENST00000370848 CCDC24Q8N4L8 307 aa19.86■□□□□ 0.77
SS18L1-202ENST00000370848 TAOK3Q9H2K8 898 aa19.86■□□□□ 0.77
SS18L1-202ENST00000370848 ERVV-1B6SEH8 477 aa19.85■□□□□ 0.77
SS18L1-202ENST00000370848 EIF4A1P60842 406 aaKnown RBP19.85■□□□□ 0.77
SS18L1-202ENST00000370848 NBPF5PQ86XG9 351 aaPredicted RBP19.85■□□□□ 0.77
SS18L1-202ENST00000370848 KLRG1Q96E93 195 aa19.85■□□□□ 0.77
SS18L1-202ENST00000370848 ERBB4Q15303 1308 aa19.84■□□□□ 0.77
SS18L1-202ENST00000370848 NPR1P16066 1061 aa19.84■□□□□ 0.77
SS18L1-202ENST00000370848 TPTE2Q6XPS3 522 aa19.84■□□□□ 0.77
SS18L1-202ENST00000370848 CRY2Q49AN0 593 aa19.83■□□□□ 0.77
SS18L1-202ENST00000370848 DPY19L2Q6NUT2 758 aa19.83■□□□□ 0.77
SS18L1-202ENST00000370848 TSPYL4Q9UJ04 414 aa19.83■□□□□ 0.77
SS18L1-202ENST00000370848 NIP7Q9Y221 180 aaKnown RBP eCLIP19.83■□□□□ 0.77
SS18L1-202ENST00000370848 SCN4AP35499 1836 aa19.82■□□□□ 0.76
SS18L1-202ENST00000370848 HLFQ16534 295 aa19.82■□□□□ 0.76
SS18L1-202ENST00000370848 ERFEQ4G0M1 354 aa19.82■□□□□ 0.76
SS18L1-202ENST00000370848 FAM9BQ8IZU0 186 aa19.82■□□□□ 0.76
SS18L1-202ENST00000370848 BABAM1Q9NWV8 329 aa19.81■□□□□ 0.76
SS18L1-202ENST00000370848 LAS1LQ9Y4W2 734 aaKnown RBP19.81■□□□□ 0.76
SS18L1-202ENST00000370848 MAP3K15Q6ZN16 1313 aa19.8■□□□□ 0.76
SS18L1-202ENST00000370848 CCDC93Q567U6 631 aa19.8■□□□□ 0.76
SS18L1-202ENST00000370848 LRP10Q7Z4F1 713 aa19.8■□□□□ 0.76
SS18L1-202ENST00000370848 L3MBTL3Q96JM7 780 aaPredicted RBP19.8■□□□□ 0.76
SS18L1-202ENST00000370848 NPHP1O15259 732 aa19.79■□□□□ 0.76
SS18L1-202ENST00000370848 ADAMTSL1Q8N6G6 1762 aa19.79■□□□□ 0.76
SS18L1-202ENST00000370848 ABCC12Q96J65 1359 aa19.79■□□□□ 0.76
SS18L1-202ENST00000370848 FKBP4Q02790 459 aaKnown RBP eCLIP19.78■□□□□ 0.76
SS18L1-202ENST00000370848 KRT24Q2M2I5 525 aa19.78■□□□□ 0.76
SS18L1-202ENST00000370848 NYXQ9GZU5 481 aa19.78■□□□□ 0.76
SS18L1-202ENST00000370848 CHL1O00533 1208 aa19.77■□□□□ 0.76
SS18L1-202ENST00000370848 HTRA3P83110 453 aa19.77■□□□□ 0.76
SS18L1-202ENST00000370848 UBN2Q6ZU65 1347 aa19.76■□□□□ 0.75
SS18L1-202ENST00000370848 ALDH1B1P30837 517 aa19.76■□□□□ 0.75
SS18L1-202ENST00000370848 HOXA10P31260 410 aaPredicted RBP19.76■□□□□ 0.75
SS18L1-202ENST00000370848 RTKN2Q8IZC4 609 aa19.76■□□□□ 0.75
SS18L1-202ENST00000370848 ZNF219Q9P2Y4 722 aaPredicted RBP19.76■□□□□ 0.75
SS18L1-202ENST00000370848 ANKRD36CQ5JPF3 1778 aa19.75■□□□□ 0.75
SS18L1-202ENST00000370848 TTLL7Q6ZT98 887 aa19.75■□□□□ 0.75
SS18L1-202ENST00000370848 ZNF34Q8IZ26 560 aa19.75■□□□□ 0.75
SS18L1-202ENST00000370848 PSMD1Q99460 953 aa19.75■□□□□ 0.75
SS18L1-202ENST00000370848 SALL2Q9Y467 1007 aaPredicted RBP19.75■□□□□ 0.75
SS18L1-202ENST00000370848 PDIA6Q15084 440 aa19.74■□□□□ 0.75
SS18L1-202ENST00000370848 DIEXFQ68CQ4 756 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms