RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 C2CD5Q86YS7 1000 aa19.99■□□□□ 0.79
SS18L1-202ENST00000370848 TBC1D2BQ9UPU7 963 aa19.99■□□□□ 0.79
SS18L1-202ENST00000370848 USP16Q9Y5T5 823 aa19.99■□□□□ 0.79
SS18L1-202ENST00000370848 SNRPA1P09661 255 aaKnown RBP19.98■□□□□ 0.79
SS18L1-202ENST00000370848 RASSF7Q02833 373 aa19.98■□□□□ 0.79
SS18L1-202ENST00000370848 DNAJC5GQ8N7S2 189 aa19.98■□□□□ 0.79
SS18L1-202ENST00000370848 CCDC88AQ3V6T2 1871 aa19.98■□□□□ 0.79
SS18L1-202ENST00000370848 LTBP3Q9NS15 1303 aa19.98■□□□□ 0.79
SS18L1-202ENST00000370848 TMPOP42166 694 aaKnown RBP19.97■□□□□ 0.79
SS18L1-202ENST00000370848 RUNDC1Q96C34 613 aa19.97■□□□□ 0.79
SS18L1-202ENST00000370848 RIPK4P57078 832 aa19.96■□□□□ 0.79
SS18L1-202ENST00000370848 BICDL1Q6ZP65 573 aa19.96■□□□□ 0.79
SS18L1-202ENST00000370848 DZIP3Q86Y13 1208 aaKnown RBP19.96■□□□□ 0.79
SS18L1-202ENST00000370848 MRS2Q9HD23 443 aa19.96■□□□□ 0.79
SS18L1-202ENST00000370848 KLRG2A4D1S0 409 aaPredicted RBP19.95■□□□□ 0.78
SS18L1-202ENST00000370848 GLTPD2A6NH11 291 aa19.95■□□□□ 0.78
SS18L1-202ENST00000370848 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
SS18L1-202ENST00000370848 SETDB2Q96T68 719 aa19.95■□□□□ 0.78
SS18L1-202ENST00000370848 MIS18AQ9NYP9 233 aa19.95■□□□□ 0.78
SS18L1-202ENST00000370848 PRAMEF22A3QJZ6 481 aa19.94■□□□□ 0.78
SS18L1-202ENST00000370848 STYK1Q6J9G0 422 aa19.94■□□□□ 0.78
SS18L1-202ENST00000370848 CNBD1Q8NA66 436 aa19.94■□□□□ 0.78
SS18L1-202ENST00000370848 SLX4Q8IY92 1834 aa19.94■□□□□ 0.78
SS18L1-202ENST00000370848 NBPF26B4DH59 902 aa19.93■□□□□ 0.78
SS18L1-202ENST00000370848 SRGNP10124 158 aa19.93■□□□□ 0.78
SS18L1-202ENST00000370848 TAF7Q15545 349 aaPredicted RBP19.93■□□□□ 0.78
SS18L1-202ENST00000370848 NBPF10Q6P3W6 841 aaKnown RBP19.93■□□□□ 0.78
SS18L1-202ENST00000370848 NBPF15Q8N660 670 aa19.93■□□□□ 0.78
SS18L1-202ENST00000370848 PNISRQ8TF01 805 aaKnown RBP19.92■□□□□ 0.78
SS18L1-202ENST00000370848 IFFO2Q5TF58 517 aa19.91■□□□□ 0.78
SS18L1-202ENST00000370848 NPM2Q86SE8 214 aaKnown RBP19.91■□□□□ 0.78
SS18L1-202ENST00000370848 C16orf71Q8IYS4 520 aaPredicted RBP19.91■□□□□ 0.78
SS18L1-202ENST00000370848 RRAGCQ9HB90 399 aa19.91■□□□□ 0.78
SS18L1-202ENST00000370848 ZNF652Q9Y2D9 606 aa19.91■□□□□ 0.78
SS18L1-202ENST00000370848 ZNF330Q9Y3S2 320 aaPredicted RBP19.91■□□□□ 0.78
SS18L1-202ENST00000370848 CACNA1SQ13698 1873 aa19.9■□□□□ 0.78
SS18L1-202ENST00000370848 ST5P78524 1137 aa19.9■□□□□ 0.78
SS18L1-202ENST00000370848 CNKSR1Q969H4 720 aa19.9■□□□□ 0.78
SS18L1-202ENST00000370848 TRIM35Q9UPQ4 493 aa19.9■□□□□ 0.78
SS18L1-202ENST00000370848 RIC1Q4ADV7 1423 aa19.9■□□□□ 0.78
SS18L1-202ENST00000370848 APAF1O14727 1248 aa19.89■□□□□ 0.77
SS18L1-202ENST00000370848 SOGA3Q5TF21 947 aa19.89■□□□□ 0.77
SS18L1-202ENST00000370848 SMC1BQ8NDV3 1235 aa19.89■□□□□ 0.77
SS18L1-202ENST00000370848 C7orf43Q8WVR3 580 aa19.89■□□□□ 0.77
SS18L1-202ENST00000370848 MASTLQ96GX5 879 aa19.89■□□□□ 0.77
SS18L1-202ENST00000370848 VEGFAP15692 232 aaPredicted RBP19.88■□□□□ 0.77
SS18L1-202ENST00000370848 PRPF40BQ6NWY9 871 aaKnown RBP19.88■□□□□ 0.77
SS18L1-202ENST00000370848 PCNTO95613 3336 aa19.88■□□□□ 0.77
SS18L1-202ENST00000370848 SNED1Q8TER0 1413 aa19.87■□□□□ 0.77
SS18L1-202ENST00000370848 IBTKQ9P2D0 1353 aaPredicted RBP19.87■□□□□ 0.77
SS18L1-202ENST00000370848 POTECB2RU33 542 aa19.87■□□□□ 0.77
SS18L1-202ENST00000370848 C21orf2O43822 256 aa19.87■□□□□ 0.77
SS18L1-202ENST00000370848 PIP4K2AP48426 406 aaPredicted RBP19.87■□□□□ 0.77
SS18L1-202ENST00000370848 LMOD3Q0VAK6 560 aa19.87■□□□□ 0.77
SS18L1-202ENST00000370848 JMYQ8N9B5 988 aa19.87■□□□□ 0.77
SS18L1-202ENST00000370848 ZNF622Q969S3 477 aaKnown RBP eCLIP19.87■□□□□ 0.777e-6■■□□□ 12.8
SS18L1-202ENST00000370848 NUP98P52948 1817 aa19.87■□□□□ 0.77
SS18L1-202ENST00000370848 CCDC24Q8N4L8 307 aa19.86■□□□□ 0.77
SS18L1-202ENST00000370848 TAOK3Q9H2K8 898 aa19.86■□□□□ 0.77
SS18L1-202ENST00000370848 ERVV-1B6SEH8 477 aa19.85■□□□□ 0.77
SS18L1-202ENST00000370848 EIF4A1P60842 406 aaKnown RBP19.85■□□□□ 0.77
SS18L1-202ENST00000370848 NBPF5PQ86XG9 351 aaPredicted RBP19.85■□□□□ 0.77
SS18L1-202ENST00000370848 KLRG1Q96E93 195 aa19.85■□□□□ 0.77
SS18L1-202ENST00000370848 ERBB4Q15303 1308 aa19.84■□□□□ 0.77
SS18L1-202ENST00000370848 NPR1P16066 1061 aa19.84■□□□□ 0.77
SS18L1-202ENST00000370848 TPTE2Q6XPS3 522 aa19.84■□□□□ 0.77
SS18L1-202ENST00000370848 CRY2Q49AN0 593 aa19.83■□□□□ 0.77
SS18L1-202ENST00000370848 DPY19L2Q6NUT2 758 aa19.83■□□□□ 0.77
SS18L1-202ENST00000370848 TSPYL4Q9UJ04 414 aa19.83■□□□□ 0.77
SS18L1-202ENST00000370848 NIP7Q9Y221 180 aaKnown RBP eCLIP19.83■□□□□ 0.77
SS18L1-202ENST00000370848 SCN4AP35499 1836 aa19.82■□□□□ 0.76
SS18L1-202ENST00000370848 HLFQ16534 295 aa19.82■□□□□ 0.76
SS18L1-202ENST00000370848 ERFEQ4G0M1 354 aa19.82■□□□□ 0.76
SS18L1-202ENST00000370848 FAM9BQ8IZU0 186 aa19.82■□□□□ 0.76
SS18L1-202ENST00000370848 BABAM1Q9NWV8 329 aa19.81■□□□□ 0.76
SS18L1-202ENST00000370848 LAS1LQ9Y4W2 734 aaKnown RBP19.81■□□□□ 0.76
SS18L1-202ENST00000370848 MAP3K15Q6ZN16 1313 aa19.8■□□□□ 0.76
SS18L1-202ENST00000370848 CCDC93Q567U6 631 aa19.8■□□□□ 0.76
SS18L1-202ENST00000370848 LRP10Q7Z4F1 713 aa19.8■□□□□ 0.76
SS18L1-202ENST00000370848 L3MBTL3Q96JM7 780 aaPredicted RBP19.8■□□□□ 0.76
SS18L1-202ENST00000370848 NPHP1O15259 732 aa19.79■□□□□ 0.76
SS18L1-202ENST00000370848 ADAMTSL1Q8N6G6 1762 aa19.79■□□□□ 0.76
SS18L1-202ENST00000370848 ABCC12Q96J65 1359 aa19.79■□□□□ 0.76
SS18L1-202ENST00000370848 FKBP4Q02790 459 aaKnown RBP eCLIP19.78■□□□□ 0.76
SS18L1-202ENST00000370848 KRT24Q2M2I5 525 aa19.78■□□□□ 0.76
SS18L1-202ENST00000370848 NYXQ9GZU5 481 aa19.78■□□□□ 0.76
SS18L1-202ENST00000370848 CHL1O00533 1208 aa19.77■□□□□ 0.76
SS18L1-202ENST00000370848 HTRA3P83110 453 aa19.77■□□□□ 0.76
SS18L1-202ENST00000370848 UBN2Q6ZU65 1347 aa19.76■□□□□ 0.75
SS18L1-202ENST00000370848 ALDH1B1P30837 517 aa19.76■□□□□ 0.75
SS18L1-202ENST00000370848 HOXA10P31260 410 aaPredicted RBP19.76■□□□□ 0.75
SS18L1-202ENST00000370848 RTKN2Q8IZC4 609 aa19.76■□□□□ 0.75
SS18L1-202ENST00000370848 ZNF219Q9P2Y4 722 aaPredicted RBP19.76■□□□□ 0.75
SS18L1-202ENST00000370848 ANKRD36CQ5JPF3 1778 aa19.75■□□□□ 0.75
SS18L1-202ENST00000370848 TTLL7Q6ZT98 887 aa19.75■□□□□ 0.75
SS18L1-202ENST00000370848 ZNF34Q8IZ26 560 aa19.75■□□□□ 0.75
SS18L1-202ENST00000370848 PSMD1Q99460 953 aa19.75■□□□□ 0.75
SS18L1-202ENST00000370848 SALL2Q9Y467 1007 aaPredicted RBP19.75■□□□□ 0.75
SS18L1-202ENST00000370848 PDIA6Q15084 440 aa19.74■□□□□ 0.75
SS18L1-202ENST00000370848 DIEXFQ68CQ4 756 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms