RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 CCDC113Q9H0I3 377 aa14.67□□□□□ -0.06
GPC4-201ENST00000370828 IMMTQ16891 758 aaKnown RBP14.66□□□□□ -0.06
GPC4-201ENST00000370828 CERS3Q8IU89 383 aa14.66□□□□□ -0.06
GPC4-201ENST00000370828 EFCAB5A4FU69 1503 aa14.66□□□□□ -0.06
GPC4-201ENST00000370828 POLR3DP05423 398 aaPredicted RBP14.66□□□□□ -0.06
GPC4-201ENST00000370828 GOLGA1Q92805 767 aa14.66□□□□□ -0.06
GPC4-201ENST00000370828 PCF11O94913 1555 aaKnown RBP14.66□□□□□ -0.06
GPC4-201ENST00000370828 LMOD1P29536 600 aaPredicted RBP14.66□□□□□ -0.06
GPC4-201ENST00000370828 CDK19Q9BWU1 502 aa14.66□□□□□ -0.06
GPC4-201ENST00000370828 EBAG9O00559 213 aa14.66□□□□□ -0.06
GPC4-201ENST00000370828 GADD45BO75293 160 aaPredicted RBP14.66□□□□□ -0.06
GPC4-201ENST00000370828 EVCP57679 992 aa14.66□□□□□ -0.06
GPC4-201ENST00000370828 FKBP4Q02790 459 aaKnown RBP eCLIP14.66□□□□□ -0.06
GPC4-201ENST00000370828 TAF4BQ92750 862 aa14.66□□□□□ -0.06
GPC4-201ENST00000370828 CTAGE15A4D2H0 777 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 CDKL5O76039 1030 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 CTAGE8P0CG41 777 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 SPA17Q15506 151 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 AP1ARQ63HQ0 302 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 CTAGE6Q86UF2 777 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 CTAGE4Q8IX94 777 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 PUF60Q9UHX1 559 aaKnown RBP14.65□□□□□ -0.06
GPC4-201ENST00000370828 PTPRKQ15262 1439 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 MAP2K1Q02750 393 aaPredicted RBP14.65□□□□□ -0.06
GPC4-201ENST00000370828 CCDC8Q9H0W5 538 aaPredicted RBP14.65□□□□□ -0.06
GPC4-201ENST00000370828 ZBTB40Q9NUA8 1239 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 TBC1D2BQ9UPU7 963 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 PAFAH1B1P43034 410 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 NLRP6P59044 892 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 ANAPC15P60006 121 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 ERBB4Q15303 1308 aa14.65□□□□□ -0.06
GPC4-201ENST00000370828 SUPT6HQ7KZ85 1726 aaKnown RBP14.64□□□□□ -0.07
GPC4-201ENST00000370828 NBPF11Q86T75 865 aa14.64□□□□□ -0.07
GPC4-201ENST00000370828 MEIS3Q99687 375 aa14.64□□□□□ -0.07
GPC4-201ENST00000370828 EID1Q9Y6B2 187 aa14.64□□□□□ -0.07
GPC4-201ENST00000370828 SWAP70Q9UH65 585 aa14.64□□□□□ -0.07
GPC4-201ENST00000370828 KARSQ15046 597 aaKnown RBP14.64□□□□□ -0.07
GPC4-201ENST00000370828 RHOXF2BP0C7M4 288 aa14.64□□□□□ -0.07
GPC4-201ENST00000370828 VPS37DQ86XT2 251 aa14.64□□□□□ -0.07
GPC4-201ENST00000370828 PLEKHM2Q8IWE5 1019 aa14.64□□□□□ -0.07
GPC4-201ENST00000370828 RHOXF2Q9BQY4 288 aa14.64□□□□□ -0.07
GPC4-201ENST00000370828 TTC39AQ5SRH9 613 aa14.63□□□□□ -0.07
GPC4-201ENST00000370828 CDK5RAP3Q96JB5 506 aa14.63□□□□□ -0.07
GPC4-201ENST00000370828 HLTFQ14527 1009 aaKnown RBP eCLIP14.63□□□□□ -0.07
GPC4-201ENST00000370828 PRM3Q9NNZ6 103 aa14.63□□□□□ -0.07
GPC4-201ENST00000370828 IFNKQ9P0W0 207 aa14.63□□□□□ -0.07
GPC4-201ENST00000370828 ATRIPQ8WXE1 791 aa14.63□□□□□ -0.07
GPC4-201ENST00000370828 INTS4Q96HW7 963 aaKnown RBP14.63□□□□□ -0.07
GPC4-201ENST00000370828 ABCC5O15440 1437 aa14.63□□□□□ -0.07
GPC4-201ENST00000370828 A0A1B0GUA9 196 aa14.63□□□□□ -0.07
GPC4-201ENST00000370828 MAATS1Q7Z4T9 603 aa14.63□□□□□ -0.07
GPC4-201ENST00000370828 MBIPQ9NS73 344 aa14.63□□□□□ -0.07
GPC4-201ENST00000370828 YEATS4O95619 227 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 IFFO1Q0D2I5 559 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 DNAJC21Q5F1R6 531 aaKnown RBP14.62□□□□□ -0.07
GPC4-201ENST00000370828 CCDC158Q5M9N0 1113 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 GBP6Q6ZN66 633 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 AMOTL1Q8IY63 956 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 CHAMP1Q96JM3 812 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 JADE2Q9NQC1 790 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 AK2P54819 239 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 FMNL3Q8IVF7 1028 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 OTUD6BQ8N6M0 293 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 SECISBP2LQ93073 1101 aaKnown RBP14.62□□□□□ -0.07
GPC4-201ENST00000370828 SYTL4Q96C24 671 aaPredicted RBP14.62□□□□□ -0.07
GPC4-201ENST00000370828 SPECC1Q5M775 1068 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 CTNNA3Q9UI47 895 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 TOP2BQ02880 1626 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 DZIP1Q86YF9 867 aaKnown RBP14.62□□□□□ -0.07
GPC4-201ENST00000370828 WDR66Q8TBY9 1149 aa14.62□□□□□ -0.07
GPC4-201ENST00000370828 DTNBO60941 627 aa14.61□□□□□ -0.07
GPC4-201ENST00000370828 TUBB4AP04350 444 aa14.61□□□□□ -0.07
GPC4-201ENST00000370828 ANKRD44Q8N8A2 993 aa14.61□□□□□ -0.07
GPC4-201ENST00000370828 ANTXR1Q9H6X2 564 aa14.61□□□□□ -0.07
GPC4-201ENST00000370828 CCDC175P0C221 793 aa14.61□□□□□ -0.07
GPC4-201ENST00000370828 ATP6V1AP38606 617 aa14.61□□□□□ -0.07
GPC4-201ENST00000370828 NEK11Q8NG66 645 aa14.61□□□□□ -0.07
GPC4-201ENST00000370828 U3KPZ7 1027 aaPredicted RBP14.61□□□□□ -0.07
GPC4-201ENST00000370828 NPHP3Q7Z494 1330 aa14.61□□□□□ -0.07
GPC4-201ENST00000370828 HSPA4P34932 840 aa14.61□□□□□ -0.07
GPC4-201ENST00000370828 PPP2R3AQ06190 1150 aa14.61□□□□□ -0.07
GPC4-201ENST00000370828 SEPT7Q16181 437 aaKnown RBP14.61□□□□□ -0.07
GPC4-201ENST00000370828 UTP14AQ9BVJ6 771 aaKnown RBP14.61□□□□□ -0.07
GPC4-201ENST00000370828 CARD6Q9BX69 1037 aa14.61□□□□□ -0.07
GPC4-201ENST00000370828 ZSCAN16Q9H4T2 348 aaPredicted RBP14.61□□□□□ -0.07
GPC4-201ENST00000370828 PKP1Q13835 747 aa14.61□□□□□ -0.07
GPC4-201ENST00000370828 RNF168Q8IYW5 571 aaPredicted RBP14.61□□□□□ -0.07
GPC4-201ENST00000370828 LZTFL1Q9NQ48 299 aa14.61□□□□□ -0.07
GPC4-201ENST00000370828 MAP2K2P36507 400 aa14.6□□□□□ -0.07
GPC4-201ENST00000370828 USP16Q9Y5T5 823 aa14.6□□□□□ -0.07
GPC4-201ENST00000370828 FAM83GA6ND36 823 aa14.6□□□□□ -0.07
GPC4-201ENST00000370828 RPAINQ86UA6 219 aa14.6□□□□□ -0.07
GPC4-201ENST00000370828 LRRC2Q9BYS8 371 aa14.6□□□□□ -0.07
GPC4-201ENST00000370828 DMRT2Q9Y5R5 561 aa14.6□□□□□ -0.07
GPC4-201ENST00000370828 ANKRD62A6NC57 917 aa14.6□□□□□ -0.07
GPC4-201ENST00000370828 ZSCAN26Q16670 478 aa14.6□□□□□ -0.07
GPC4-201ENST00000370828 RAB11FIP4Q86YS3 637 aa14.6□□□□□ -0.07
GPC4-201ENST00000370828 CCDC82Q8N4S0 544 aa14.6□□□□□ -0.07
GPC4-201ENST00000370828 OAS2P29728 719 aaKnown RBP14.6□□□□□ -0.07
GPC4-201ENST00000370828 CEP112Q8N8E3 955 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms