RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 TREML4Q6UXN2 200 aa11.57□□□□□ -0.56
COL21A1-202ENST00000370817 RIC3Q7Z5B4 369 aa11.57□□□□□ -0.56
COL21A1-202ENST00000370817 MED1Q15648 1581 aaPredicted RBP11.57□□□□□ -0.56
COL21A1-202ENST00000370817 SOS2Q07890 1332 aaPredicted RBP11.57□□□□□ -0.56
COL21A1-202ENST00000370817 LYPD8Q6UX82 237 aa11.56□□□□□ -0.56
COL21A1-202ENST00000370817 ZBTB3Q9H5J0 574 aa11.56□□□□□ -0.56
COL21A1-202ENST00000370817 SLC24A3Q9HC58 644 aa11.56□□□□□ -0.56
COL21A1-202ENST00000370817 USP47Q96K76 1375 aa11.55□□□□□ -0.56
COL21A1-202ENST00000370817 ZNF511Q8NB15 262 aa11.55□□□□□ -0.56
COL21A1-202ENST00000370817 CABLES1Q8TDN4 633 aa11.55□□□□□ -0.56
COL21A1-202ENST00000370817 TESK2Q96S53 571 aa11.55□□□□□ -0.56
COL21A1-202ENST00000370817 SNRPBP14678 240 aaKnown RBP11.54□□□□□ -0.56
COL21A1-202ENST00000370817 DDX17Q92841 729 aaKnown RBP11.54□□□□□ -0.56
COL21A1-202ENST00000370817 CDK19Q9BWU1 502 aa11.54□□□□□ -0.56
COL21A1-202ENST00000370817 POLR3AO14802 1390 aaPredicted RBP11.54□□□□□ -0.56
COL21A1-202ENST00000370817 USP54Q70EL1 1684 aa11.53□□□□□ -0.56
COL21A1-202ENST00000370817 CSPP1Q1MSJ5 1256 aa11.53□□□□□ -0.56
COL21A1-202ENST00000370817 ESCO1Q5FWF5 840 aa11.53□□□□□ -0.56
COL21A1-202ENST00000370817 PRPF38BQ5VTL8 546 aaKnown RBP11.53□□□□□ -0.56
COL21A1-202ENST00000370817 TRIM47Q96LD4 638 aa11.53□□□□□ -0.56
COL21A1-202ENST00000370817 LIMD1Q9UGP4 676 aa11.53□□□□□ -0.56
COL21A1-202ENST00000370817 TLL2Q9Y6L7 1015 aa11.53□□□□□ -0.56
COL21A1-202ENST00000370817 LRP6O75581 1613 aa11.53□□□□□ -0.56
COL21A1-202ENST00000370817 JCADQ9P266 1359 aa11.53□□□□□ -0.56
COL21A1-202ENST00000370817 CTHP32929 405 aa11.52□□□□□ -0.57
COL21A1-202ENST00000370817 MYSM1Q5VVJ2 828 aa11.52□□□□□ -0.57
COL21A1-202ENST00000370817 ERICH6Q7L0X2 663 aa11.52□□□□□ -0.57
COL21A1-202ENST00000370817 NUDT16Q96DE0 195 aaKnown RBP11.52□□□□□ -0.57
COL21A1-202ENST00000370817 WASF2Q9Y6W5 498 aa11.52□□□□□ -0.57
COL21A1-202ENST00000370817 NPHP3Q7Z494 1330 aa11.52□□□□□ -0.57
COL21A1-202ENST00000370817 PHRF1Q9P1Y6 1649 aaKnown RBP11.52□□□□□ -0.57
COL21A1-202ENST00000370817 PNPLA6Q8IY17 1366 aa11.52□□□□□ -0.57
COL21A1-202ENST00000370817 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.57
COL21A1-202ENST00000370817 CD163L1Q9NR16 1453 aa11.51□□□□□ -0.57
COL21A1-202ENST00000370817 ST20-MTHFSA0A0A6YYL1 179 aa11.51□□□□□ -0.57
COL21A1-202ENST00000370817 SENP2Q9HC62 589 aa11.51□□□□□ -0.57
COL21A1-202ENST00000370817 MAP10Q9P2G4 905 aa11.51□□□□□ -0.57
COL21A1-202ENST00000370817 PIK3C2AO00443 1686 aa11.51□□□□□ -0.57
COL21A1-202ENST00000370817 EVC2Q86UK5 1308 aa11.51□□□□□ -0.57
COL21A1-202ENST00000370817 SBNO1A3KN83 1393 aa11.51□□□□□ -0.57
COL21A1-202ENST00000370817 PLEKHG3A1L390 1219 aa11.5□□□□□ -0.57
COL21A1-202ENST00000370817 F12P00748 615 aaPredicted RBP11.5□□□□□ -0.57
COL21A1-202ENST00000370817 TMEM132AQ24JP5 1023 aa11.5□□□□□ -0.57
COL21A1-202ENST00000370817 DISP3Q9P2K9 1392 aa11.5□□□□□ -0.57
COL21A1-202ENST00000370817 TNS3Q68CZ2 1445 aa11.5□□□□□ -0.57
COL21A1-202ENST00000370817 SSH2Q76I76 1423 aa11.5□□□□□ -0.57
COL21A1-202ENST00000370817 FOXO3O43524 673 aa11.49□□□□□ -0.57
COL21A1-202ENST00000370817 QPCTQ16769 361 aa11.49□□□□□ -0.57
COL21A1-202ENST00000370817 PUS7Q96PZ0 661 aaKnown RBP11.49□□□□□ -0.57
COL21A1-202ENST00000370817 ATAD2Q6PL18 1390 aa11.49□□□□□ -0.57
COL21A1-202ENST00000370817 CPSF1Q10570 1443 aaKnown RBP11.49□□□□□ -0.57
COL21A1-202ENST00000370817 PER1O15534 1290 aaPredicted RBP11.48□□□□□ -0.57
COL21A1-202ENST00000370817 VARSP26640 1264 aaKnown RBP11.48□□□□□ -0.57
COL21A1-202ENST00000370817 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.47□□□□□ -0.57
COL21A1-202ENST00000370817 SPATA31A6Q5VVP1 1343 aa11.47□□□□□ -0.57
COL21A1-202ENST00000370817 SPATA31A3Q5VYP0 1347 aa11.47□□□□□ -0.57
COL21A1-202ENST00000370817 WFS1O76024 890 aa11.47□□□□□ -0.57
COL21A1-202ENST00000370817 BMP1P13497 986 aa11.47□□□□□ -0.57
COL21A1-202ENST00000370817 NFX1Q12986 1120 aaKnown RBP11.47□□□□□ -0.57
COL21A1-202ENST00000370817 PMFBP1Q8TBY8 1022 aa11.47□□□□□ -0.57
COL21A1-202ENST00000370817 KIFC2Q96AC6 838 aa11.47□□□□□ -0.57
COL21A1-202ENST00000370817 LRRC59Q96AG4 307 aaKnown RBP11.47□□□□□ -0.57
COL21A1-202ENST00000370817 USP6P35125 1406 aa11.46□□□□□ -0.57
COL21A1-202ENST00000370817 ACEP12821 1306 aa11.46□□□□□ -0.57
COL21A1-202ENST00000370817 CAPN5O15484 640 aaPredicted RBP11.46□□□□□ -0.57
COL21A1-202ENST00000370817 SRPK2P78362 688 aaKnown RBP11.46□□□□□ -0.57
COL21A1-202ENST00000370817 TUSC1Q2TAM9 212 aa11.46□□□□□ -0.57
COL21A1-202ENST00000370817 KRT28Q7Z3Y7 464 aa11.46□□□□□ -0.57
COL21A1-202ENST00000370817 TRIM46Q7Z4K8 759 aa11.46□□□□□ -0.57
COL21A1-202ENST00000370817 KIF20BQ96Q89 1820 aa11.46□□□□□ -0.58
COL21A1-202ENST00000370817 PLCH1Q4KWH8 1693 aa11.46□□□□□ -0.58
COL21A1-202ENST00000370817 BRD4O60885 1362 aaPredicted RBP11.45□□□□□ -0.58
COL21A1-202ENST00000370817 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
COL21A1-202ENST00000370817 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
COL21A1-202ENST00000370817 LILRB3O75022 631 aa11.45□□□□□ -0.58
COL21A1-202ENST00000370817 XPCQ01831 940 aaPredicted RBP11.45□□□□□ -0.58
COL21A1-202ENST00000370817 NUTM2AQ8IVF1 878 aaPredicted RBP11.45□□□□□ -0.58
COL21A1-202ENST00000370817 MPNDQ8N594 471 aa11.45□□□□□ -0.58
COL21A1-202ENST00000370817 TSC1Q92574 1164 aa11.45□□□□□ -0.58
COL21A1-202ENST00000370817 NWD2Q9ULI1 1742 aa11.45□□□□□ -0.58
COL21A1-202ENST00000370817 NINLQ9Y2I6 1382 aa11.44□□□□□ -0.58
COL21A1-202ENST00000370817 NRAPQ86VF7 1730 aa11.44□□□□□ -0.58
COL21A1-202ENST00000370817 FOXJ1Q92949 421 aa11.44□□□□□ -0.58
COL21A1-202ENST00000370817 SLIT3O75094 1523 aa11.44□□□□□ -0.58
COL21A1-202ENST00000370817 ARHGEF10O15013 1369 aa11.43□□□□□ -0.58
COL21A1-202ENST00000370817 HSPA5P11021 654 aaKnown RBP11.43□□□□□ -0.58
COL21A1-202ENST00000370817 NNTQ13423 1086 aa11.43□□□□□ -0.58
COL21A1-202ENST00000370817 CABP1Q9NZU7 370 aa11.43□□□□□ -0.58
COL21A1-202ENST00000370817 ANKRD26Q9UPS8 1709 aa11.43□□□□□ -0.58
COL21A1-202ENST00000370817 CLK2P49760 499 aaKnown RBP11.42□□□□□ -0.58
COL21A1-202ENST00000370817 EIF4G2P78344 907 aaKnown RBP eCLIP11.42□□□□□ -0.58
COL21A1-202ENST00000370817 PSME1Q06323 249 aa11.42□□□□□ -0.58
COL21A1-202ENST00000370817 RTL5Q5HYW3 569 aaPredicted RBP11.42□□□□□ -0.58
COL21A1-202ENST00000370817 NGDNQ8NEJ9 315 aaKnown RBP11.42□□□□□ -0.58
COL21A1-202ENST00000370817 A0A1W2PP64 1363 aa11.41□□□□□ -0.58
COL21A1-202ENST00000370817 COL18A1P39060 1754 aa11.41□□□□□ -0.58
COL21A1-202ENST00000370817 COL14A1Q05707 1796 aaKnown RBP11.41□□□□□ -0.58
COL21A1-202ENST00000370817 LMO7Q8WWI1 1683 aa11.41□□□□□ -0.58
COL21A1-202ENST00000370817 TMF1P82094 1093 aa11.41□□□□□ -0.58
COL21A1-202ENST00000370817 LCE2CQ5TA81 110 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms